RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 DNAH12Q6ZR08 3092 aa9.21□□□□□ -0.94
CTNNA1-216ENST00000519489 NUP98P52948 1817 aa9.21□□□□□ -0.94
CTNNA1-216ENST00000519489 CHD9Q3L8U1 2897 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 GNAT3A8MTJ3 354 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 UFL1O94874 794 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 COL6A1P12109 1028 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 FLT3LGP49771 235 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 GTF2A2P52657 109 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 SMAD3P84022 425 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 TRIM32Q13049 653 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 VGLL4Q14135 290 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 MFSD10Q14728 455 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 PARP10Q53GL7 1025 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 LRP10Q7Z4F1 713 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 ANKLE1Q8NAG6 615 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 PODXL2Q9NZ53 605 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 RRP7AQ9Y3A4 280 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 CHD8Q9HCK8 2581 aa9.2□□□□□ -0.94
CTNNA1-216ENST00000519489 CACNA1BQ00975 2339 aa9.19□□□□□ -0.94
CTNNA1-216ENST00000519489 MYL6BP14649 208 aa9.19□□□□□ -0.94
CTNNA1-216ENST00000519489 HOXD10P28358 340 aa9.19□□□□□ -0.94
CTNNA1-216ENST00000519489 IREB2P48200 963 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-216ENST00000519489 ADGRE1Q14246 886 aa9.19□□□□□ -0.94
CTNNA1-216ENST00000519489 NLRP10Q86W26 655 aa9.19□□□□□ -0.94
CTNNA1-216ENST00000519489 EPG5Q9HCE0 2579 aa9.19□□□□□ -0.94
CTNNA1-216ENST00000519489 C5orf42Q9H799 3197 aa9.19□□□□□ -0.94
CTNNA1-216ENST00000519489 DDX60Q8IY21 1712 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-216ENST00000519489 SPTBN4Q9H254 2564 aa9.18□□□□□ -0.94
CTNNA1-216ENST00000519489 TK2O00142 265 aa9.18□□□□□ -0.94
CTNNA1-216ENST00000519489 BCRP11274 1271 aa9.18□□□□□ -0.94
CTNNA1-216ENST00000519489 KCNQ1P51787 676 aa9.18□□□□□ -0.94
CTNNA1-216ENST00000519489 TFF2Q03403 129 aa9.18□□□□□ -0.94
CTNNA1-216ENST00000519489 MOGSQ13724 837 aa9.18□□□□□ -0.94
CTNNA1-216ENST00000519489 ADGRD1Q6QNK2 874 aa9.18□□□□□ -0.94
CTNNA1-216ENST00000519489 ANKS1AQ92625 1134 aa9.18□□□□□ -0.94
CTNNA1-216ENST00000519489 DDX27Q96GQ7 796 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-216ENST00000519489 DCHS1Q96JQ0 3298 aa9.18□□□□□ -0.94
CTNNA1-216ENST00000519489 OTOFQ9HC10 1997 aa9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 COL1A1P02452 1464 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 ZNF804BA4D1E1 1349 aa9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 CLRN2A0PK11 232 aa9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 SMIM22K7EJ46 135 aa9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 CCDC85BQ15834 202 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 KIF6Q6ZMV9 814 aa9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 KIAA0825Q8IV33 1275 aa9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 ZBTB38Q8NAP3 1195 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 PXYLP1Q8TE99 480 aa9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 FBXL18Q96ME1 805 aa9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 THUMPD2Q9BTF0 503 aaKnown RBP9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 MIS18AQ9NYP9 233 aa9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 OGDHLQ9ULD0 1010 aa9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 ANKRD36CQ5JPF3 1778 aa9.17□□□□□ -0.94
CTNNA1-216ENST00000519489 IRF6O14896 467 aa9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 CAPN2P17655 700 aa9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 PDE3AQ14432 1141 aa9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 RASA3Q14644 834 aa9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 SF3B3Q15393 1217 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 SUPT20HL1Q3ZLR7 823 aa9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 HELBQ8NG08 1087 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 TEPSINQ96N21 525 aa9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 LARP6Q9BRS8 491 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 ZCCHC17Q9NP64 241 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 CD320Q9NPF0 282 aa9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 SEC31BQ9NQW1 1179 aa9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 SNCAIPQ9Y6H5 919 aa9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 PSME4Q14997 1843 aa9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 DDX60LQ5H9U9 1706 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-216ENST00000519489 TCF20Q9UGU0 1960 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-216ENST00000519489 KMT2BQ9UMN6 2715 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-216ENST00000519489 SPDYE5A6NIY4 337 aa9.15□□□□□ -0.94
CTNNA1-216ENST00000519489 CETPP11597 493 aa9.15□□□□□ -0.94
CTNNA1-216ENST00000519489 RPS8P62241 208 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-216ENST00000519489 TXNRD3Q86VQ6 643 aa9.15□□□□□ -0.94
CTNNA1-216ENST00000519489 OGFOD1Q8N543 542 aa9.15□□□□□ -0.94
CTNNA1-216ENST00000519489 PHACTR3Q96KR7 559 aa9.15□□□□□ -0.94
CTNNA1-216ENST00000519489 GGA1Q9UJY5 639 aa9.15□□□□□ -0.94
CTNNA1-216ENST00000519489 CHD7Q9P2D1 2997 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 PDHXO00330 501 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 PSEN2P49810 448 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 EPHB4P54760 987 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 FCGRTP55899 365 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 MAP3K9P80192 1104 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 IRF5Q13568 498 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 PDIA6Q15084 440 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 PROSER3Q2NL68 480 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 AKNAD1Q5T1N1 836 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 DMRTA1Q5VZB9 504 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 MCM10Q7L590 875 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 CERS5Q8N5B7 392 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 PRMT6Q96LA8 375 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 TRMT112Q9UI30 125 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 PPP2R3BQ9Y5P8 575 aa9.14□□□□□ -0.95
CTNNA1-216ENST00000519489 SH3TC1Q8TE82 1336 aa9.13□□□□□ -0.95
CTNNA1-216ENST00000519489 HRO43593 1189 aa9.13□□□□□ -0.95
CTNNA1-216ENST00000519489 CYP2C8P10632 490 aa9.13□□□□□ -0.95
CTNNA1-216ENST00000519489 FOXK2Q01167 660 aa9.13□□□□□ -0.95
CTNNA1-216ENST00000519489 DCTN1Q14203 1278 aa9.13□□□□□ -0.95
CTNNA1-216ENST00000519489 STRIP1Q5VSL9 837 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms