RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 APOBEC3HQ6NTF7 200 aaKnown RBP19.94■□□□□ 0.78
HMGCL-209ENST00000513148 CNTROBQ8N137 903 aa19.94■□□□□ 0.78
HMGCL-209ENST00000513148 MRIQ9BWK5 157 aa19.94■□□□□ 0.78
HMGCL-209ENST00000513148 GLIS2Q9BZE0 524 aaPredicted RBP19.94■□□□□ 0.78
HMGCL-209ENST00000513148 CACNB3P54284 484 aa19.93■□□□□ 0.78
HMGCL-209ENST00000513148 ADGRA1Q86SQ6 560 aa19.93■□□□□ 0.78
HMGCL-209ENST00000513148 PGAP2Q9UHJ9 254 aa19.93■□□□□ 0.78
HMGCL-209ENST00000513148 ADM5C9JUS6 153 aa19.93■□□□□ 0.78
HMGCL-209ENST00000513148 CYP7A1P22680 504 aa19.93■□□□□ 0.78
HMGCL-209ENST00000513148 BTDP43251 543 aa19.93■□□□□ 0.78
HMGCL-209ENST00000513148 SLC9C2Q5TAH2 1124 aa19.93■□□□□ 0.78
HMGCL-209ENST00000513148 DLK2Q6UY11 383 aa19.93■□□□□ 0.78
HMGCL-209ENST00000513148 KRT26Q7Z3Y9 468 aa19.93■□□□□ 0.78
HMGCL-209ENST00000513148 GAKO14976 1311 aa19.93■□□□□ 0.78
HMGCL-209ENST00000513148 SULF1Q8IWU6 871 aa19.92■□□□□ 0.78
HMGCL-209ENST00000513148 ZNF70Q9UC06 446 aaPredicted RBP19.92■□□□□ 0.78
HMGCL-209ENST00000513148 BRPF3Q9ULD4 1205 aa19.92■□□□□ 0.78
HMGCL-209ENST00000513148 CHGBP05060 677 aa19.92■□□□□ 0.78
HMGCL-209ENST00000513148 LDHCP07864 332 aa19.92■□□□□ 0.78
HMGCL-209ENST00000513148 PDE6AP16499 860 aa19.92■□□□□ 0.78
HMGCL-209ENST00000513148 SPDYE2Q495Y8 402 aa19.92■□□□□ 0.78
HMGCL-209ENST00000513148 SLFNL1Q499Z3 407 aa19.92■□□□□ 0.78
HMGCL-209ENST00000513148 USP48Q86UV5 1035 aa19.92■□□□□ 0.78
HMGCL-209ENST00000513148 TRAF5O00463 557 aa19.91■□□□□ 0.78
HMGCL-209ENST00000513148 FMR1Q06787 632 aaKnown RBP eCLIP19.91■□□□□ 0.78
HMGCL-209ENST00000513148 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.91■□□□□ 0.78
HMGCL-209ENST00000513148 AATFQ9NY61 560 aaKnown RBP eCLIP19.91■□□□□ 0.78
HMGCL-209ENST00000513148 PITPNM2Q9BZ72 1349 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 ZNF532Q9HCE3 1301 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 TRIM6-TRIM34B2RNG4 842 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 TCP10L2B9ZVM9 353 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 CDC42EP5Q6NZY7 148 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 CDC37L1Q7L3B6 337 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 KBTBD3Q8NAB2 608 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 MIGA1Q8NAN2 632 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 FAM163AQ96GL9 167 aaPredicted RBP19.9■□□□□ 0.78
HMGCL-209ENST00000513148 FSD1Q9BTV5 496 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 OSBPL3Q9H4L5 887 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 USP40Q9NVE5 1235 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 TMOD2Q9NZR1 351 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 AK9Q5TCS8 1911 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 FSTL1Q12841 308 aa19.9■□□□□ 0.78
HMGCL-209ENST00000513148 NOL10Q9BSC4 688 aaKnown RBP19.9■□□□□ 0.78
HMGCL-209ENST00000513148 GPR75-ASB3A0A0A6YYF3 556 aa19.89■□□□□ 0.77
HMGCL-209ENST00000513148 NFKBIBQ15653 356 aa19.89■□□□□ 0.77
HMGCL-209ENST00000513148 PRAMEF18Q5VWM3 479 aa19.89■□□□□ 0.77
HMGCL-209ENST00000513148 APOBEC3FQ8IUX4 373 aaKnown RBP19.89■□□□□ 0.77
HMGCL-209ENST00000513148 ITGBL1O95965 494 aaPredicted RBP19.88■□□□□ 0.77
HMGCL-209ENST00000513148 RILPL2Q969X0 211 aa19.88■□□□□ 0.77
HMGCL-209ENST00000513148 ADD2P35612 726 aa19.88■□□□□ 0.77
HMGCL-209ENST00000513148 ZNF408Q9H9D4 720 aa19.88■□□□□ 0.77
HMGCL-209ENST00000513148 TCRBV5S4A2TA0A5A2 114 aa19.87■□□□□ 0.77
HMGCL-209ENST00000513148 RGS3P49796 1198 aa19.87■□□□□ 0.77
HMGCL-209ENST00000513148 DYNLL1P63167 89 aaKnown RBP19.87■□□□□ 0.77
HMGCL-209ENST00000513148 DEFB129Q9H1M3 183 aa19.87■□□□□ 0.77
HMGCL-209ENST00000513148 IGSF3O75054 1194 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 BAG3O95817 575 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 TCP10Q12799 353 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 NFIAQ12857 509 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 GLIPR1L2Q4G1C9 344 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 ZSCAN25Q6NSZ9 544 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 SH3RF3Q8TEJ3 882 aaPredicted RBP19.86■□□□□ 0.77
HMGCL-209ENST00000513148 EVI5LQ96CN4 794 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 RHBDL3P58872 404 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 C1QTNF8P60827 252 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 PICALMQ13492 652 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 TNFAIP1Q13829 316 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 RASA3Q14644 834 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 TTC22Q5TAA0 569 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 CDK5RAP2Q96SN8 1893 aa19.86■□□□□ 0.77
HMGCL-209ENST00000513148 GSPT1P15170 499 aaKnown RBP19.85■□□□□ 0.77
HMGCL-209ENST00000513148 TMEM39BQ9GZU3 492 aa19.85■□□□□ 0.77
HMGCL-209ENST00000513148 TRPM7Q96QT4 1865 aa19.85■□□□□ 0.77
HMGCL-209ENST00000513148 TEX11Q8IYF3 940 aa19.85■□□□□ 0.77
HMGCL-209ENST00000513148 CDCA5Q96FF9 252 aa19.85■□□□□ 0.77
HMGCL-209ENST00000513148 CNTNAP1P78357 1384 aa19.84■□□□□ 0.77
HMGCL-209ENST00000513148 PASKQ96RG2 1323 aa19.84■□□□□ 0.77
HMGCL-209ENST00000513148 MAGEB6P1A0A0J9YX57 407 aa19.84■□□□□ 0.77
HMGCL-209ENST00000513148 RNF113AO15541 343 aaKnown RBP19.84■□□□□ 0.77
HMGCL-209ENST00000513148 EIF5BO60841 1220 aaKnown RBP19.84■□□□□ 0.77
HMGCL-209ENST00000513148 TNNI2P48788 182 aa19.84■□□□□ 0.77
HMGCL-209ENST00000513148 UBE3CQ15386 1083 aa19.84■□□□□ 0.77
HMGCL-209ENST00000513148 WDHD1O75717 1129 aaPredicted RBP19.83■□□□□ 0.77
HMGCL-209ENST00000513148 TMED8Q6PL24 325 aaPredicted RBP19.83■□□□□ 0.77
HMGCL-209ENST00000513148 CDAN1Q8IWY9 1227 aa19.83■□□□□ 0.77
HMGCL-209ENST00000513148 DDX4Q9NQI0 724 aaKnown RBP19.83■□□□□ 0.77
HMGCL-209ENST00000513148 FAM198AQ9UFP1 575 aa19.83■□□□□ 0.77
HMGCL-209ENST00000513148 PLCG2P16885 1265 aa19.83■□□□□ 0.76
HMGCL-209ENST00000513148 LRRFIP1Q32MZ4 808 aaKnown RBP19.83■□□□□ 0.76
HMGCL-209ENST00000513148 PUS7LQ9H0K6 701 aaKnown RBP19.83■□□□□ 0.76
HMGCL-209ENST00000513148 FOCADQ5VW36 1801 aa19.83■□□□□ 0.76
HMGCL-209ENST00000513148 RFX7Q2KHR2 1363 aa19.82■□□□□ 0.76
HMGCL-209ENST00000513148 MBD4O95243 580 aa19.82■□□□□ 0.76
HMGCL-209ENST00000513148 CELF2O95319 508 aaKnown RBP19.82■□□□□ 0.76
HMGCL-209ENST00000513148 ZFYP08048 801 aaPredicted RBP19.82■□□□□ 0.76
HMGCL-209ENST00000513148 PPP4CP60510 307 aa19.82■□□□□ 0.76
HMGCL-209ENST00000513148 LCORLQ8N3X6 602 aa19.82■□□□□ 0.76
HMGCL-209ENST00000513148 TGFBRAP1Q8WUH2 860 aa19.82■□□□□ 0.76
HMGCL-209ENST00000513148 RIOK1Q9BRS2 568 aaKnown RBP19.82■□□□□ 0.76
HMGCL-209ENST00000513148 ARMT1Q9H993 441 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms