RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 ANO1Q5XXA6 986 aa23.99■■□□□ 1.43
SPOCK3-219ENST00000511905 MAGEB6Q8N7X4 407 aa23.99■■□□□ 1.43
SPOCK3-219ENST00000511905 STAG1Q8WVM7 1258 aa23.99■■□□□ 1.43
SPOCK3-219ENST00000511905 ZNF830Q96NB3 372 aaPredicted RBP23.99■■□□□ 1.43
SPOCK3-219ENST00000511905 BPIFA3Q9BQP9 254 aa23.99■■□□□ 1.43
SPOCK3-219ENST00000511905 KCNF1Q9H3M0 494 aa23.99■■□□□ 1.43
SPOCK3-219ENST00000511905 PPP6R2O75170 966 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 CMA1P23946 247 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 ITPK1Q13572 414 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 NTRK3Q16288 839 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 TMTC2Q8N394 836 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 HELBQ8NG08 1087 aaPredicted RBP23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 WASF1Q92558 559 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 TIGD1Q96MW7 591 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 TRIM5Q9C035 493 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 EPB41L4AQ9HCS5 686 aaPredicted RBP23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 BCL9LQ86UU0 1499 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 COL5A3P25940 1745 aaPredicted RBP23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 GSG1L2A8MUP6 293 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 B4E1Z4 1266 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 MBD4O95243 580 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 SLC39A14Q15043 492 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 ALG1Q9BT22 464 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 SEC31BQ9NQW1 1179 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 NIP7Q9Y221 180 aaKnown RBP eCLIP23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 CLIC4Q9Y696 253 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 ZNF804BA4D1E1 1349 aa23.98■■□□□ 1.43
SPOCK3-219ENST00000511905 FAM237AA0A1B0GTK4 181 aa23.97■■□□□ 1.43
SPOCK3-219ENST00000511905 ZBTB22O15209 634 aa23.97■■□□□ 1.43
SPOCK3-219ENST00000511905 SF3B3Q15393 1217 aaKnown RBP23.97■■□□□ 1.43
SPOCK3-219ENST00000511905 JMYQ8N9B5 988 aa23.97■■□□□ 1.43
SPOCK3-219ENST00000511905 RNF41Q9H4P4 317 aaPredicted RBP23.97■■□□□ 1.43
SPOCK3-219ENST00000511905 NEDD4P46934 1319 aa23.97■■□□□ 1.43
SPOCK3-219ENST00000511905 NEMFO60524 1076 aa23.96■■□□□ 1.43
SPOCK3-219ENST00000511905 U2AF2P26368 475 aaKnown RBP eCLIP23.96■■□□□ 1.43
SPOCK3-219ENST00000511905 RBM6P78332 1123 aaKnown RBP23.96■■□□□ 1.43
SPOCK3-219ENST00000511905 TMEM67Q5HYA8 995 aa23.96■■□□□ 1.43
SPOCK3-219ENST00000511905 CEP57L1Q8IYX8 460 aa23.96■■□□□ 1.43
SPOCK3-219ENST00000511905 IARSP41252 1262 aaKnown RBP23.96■■□□□ 1.43
SPOCK3-219ENST00000511905 UBE4AQ14139 1066 aa23.96■■□□□ 1.43
SPOCK3-219ENST00000511905 AXDND1Q5T1B0 1012 aaPredicted RBP23.96■■□□□ 1.43
SPOCK3-219ENST00000511905 MFSD6Q6ZSS7 791 aa23.96■■□□□ 1.43
SPOCK3-219ENST00000511905 KIF28PB7ZC32 967 aa23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 IFNAR1P17181 557 aa23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 CHRNDQ07001 517 aa23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 PPP2R5BQ15173 497 aa23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 KRT40Q6A162 431 aa23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 OTUD7BQ6GQQ9 843 aa23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 TMED8Q6PL24 325 aaPredicted RBP23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 FAM217BQ9NTX9 383 aaPredicted RBP23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 GNL3LQ9NVN8 582 aaKnown RBP23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 ZSWIM5Q9P217 1185 aa23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 KIAA1468Q9P260 1216 aa23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 ANAPC4Q9UJX5 808 aa23.95■■□□□ 1.42
SPOCK3-219ENST00000511905 MYH14Q7Z406 1995 aaKnown RBP23.94■■□□□ 1.42
SPOCK3-219ENST00000511905 UQCRHLA0A096LP55 91 aa23.94■■□□□ 1.42
SPOCK3-219ENST00000511905 GOLGA8AA7E2F4 631 aa23.94■■□□□ 1.42
SPOCK3-219ENST00000511905 POLR3DP05423 398 aaPredicted RBP23.94■■□□□ 1.42
SPOCK3-219ENST00000511905 UQCRHP07919 91 aa23.94■■□□□ 1.42
SPOCK3-219ENST00000511905 SART3Q15020 963 aaKnown RBP23.94■■□□□ 1.42
SPOCK3-219ENST00000511905 SPC24Q8NBT2 197 aa23.94■■□□□ 1.42
SPOCK3-219ENST00000511905 MYRIPQ8NFW9 859 aa23.94■■□□□ 1.42
SPOCK3-219ENST00000511905 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.94■■□□□ 1.42
SPOCK3-219ENST00000511905 SLC12A7Q9Y666 1083 aa23.94■■□□□ 1.42
SPOCK3-219ENST00000511905 CHD4Q14839 1912 aa23.94■■□□□ 1.42
SPOCK3-219ENST00000511905 FMNL1O95466 1100 aaPredicted RBP23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 CDC27P30260 824 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 GTF2F1P35269 517 aaKnown RBP eCLIP23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 NDUFA8P51970 172 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 TRIM29Q14134 588 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 SLC10A5Q5PT55 438 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 NFXL1Q6ZNB6 911 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 C11orf57Q6ZUT1 292 aaPredicted RBP23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 ELOA2Q8IYF1 753 aaPredicted RBP23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 MAP7D2Q96T17 732 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 SDF4Q9BRK5 362 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 CCDC69A6NI79 296 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 BECN2A8MW95 431 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 IFIT3O14879 490 aaKnown RBP23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 BCAMP50895 628 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 VPS37DQ86XT2 251 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 DHX40Q8IX18 779 aaKnown RBP23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 ARMT1Q9H993 441 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 BSDC1Q9NW68 430 aaPredicted RBP23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 KAT6BQ8WYB5 2073 aa23.93■■□□□ 1.42
SPOCK3-219ENST00000511905 LTBP4Q8N2S1 1624 aa23.92■■□□□ 1.42
SPOCK3-219ENST00000511905 CCDC196A0A1B0GTZ2 297 aa23.92■■□□□ 1.42
SPOCK3-219ENST00000511905 SSRP1Q08945 709 aaKnown RBP23.92■■□□□ 1.42
SPOCK3-219ENST00000511905 DNTTIP2Q5QJE6 756 aaKnown RBP23.92■■□□□ 1.42
SPOCK3-219ENST00000511905 CCDC186Q7Z3E2 898 aa23.92■■□□□ 1.42
SPOCK3-219ENST00000511905 DENND2AQ9ULE3 1009 aa23.92■■□□□ 1.42
SPOCK3-219ENST00000511905 SLC4A4Q9Y6R1 1079 aa23.92■■□□□ 1.42
SPOCK3-219ENST00000511905 PDS5AQ29RF7 1337 aaKnown RBP23.91■■□□□ 1.42
SPOCK3-219ENST00000511905 A0A1B0GVL5 298 aa23.91■■□□□ 1.42
SPOCK3-219ENST00000511905 PCP11498 1178 aaKnown RBP23.91■■□□□ 1.42
SPOCK3-219ENST00000511905 PTGS1P23219 599 aa23.91■■□□□ 1.42
SPOCK3-219ENST00000511905 DHX8Q14562 1220 aaKnown RBP23.91■■□□□ 1.42
SPOCK3-219ENST00000511905 MTERF4Q7Z6M4 381 aaKnown RBP23.91■■□□□ 1.42
SPOCK3-219ENST00000511905 ACSBG1Q96GR2 724 aa23.91■■□□□ 1.42
SPOCK3-219ENST00000511905 CLIP2Q9UDT6 1046 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms