RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 IGDCC4Q8TDY8 1250 aa16.51■□□□□ 0.23
AP003555.1-202ENST00000511013 WWC3Q9ULE0 1092 aa16.51■□□□□ 0.23
AP003555.1-202ENST00000511013 PLCH1Q4KWH8 1693 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 B4E1Z4 1266 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 KIF28PB7ZC32 967 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 PPP6R2O75170 966 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 IARSP41252 1262 aaKnown RBP16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 NLRP12P59046 1061 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 CCDC144BQ3MJ40 725 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 TMEM67Q5HYA8 995 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 CCDC144CPQ8IYA2 1237 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 WASF1Q92558 559 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 KRT23Q9C075 422 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 NAPBQ9H115 298 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 CHD4Q14839 1912 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 DOCK2Q92608 1830 aa16.5■□□□□ 0.23
AP003555.1-202ENST00000511013 AXDND1Q5T1B0 1012 aaPredicted RBP16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 KRT40Q6A162 431 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 IFNL3Q8IZI9 196 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 SYTL4Q96C24 671 aaPredicted RBP16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 MPHOSPH8Q99549 860 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 IMPACTQ9P2X3 320 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 PAXBP1Q9Y5B6 917 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 UBN2Q6ZU65 1347 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 STK36Q9NRP7 1315 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 GOLGA8AA7E2F4 631 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 RIOK3O14730 519 aaKnown RBP16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 TPD52L1Q16890 204 aaPredicted RBP16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 MTA3Q9BTC8 594 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 UTP14AQ9BVJ6 771 aaKnown RBP16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 NACAP1Q9BZK3 213 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 LY9Q9HBG7 655 aa16.49■□□□□ 0.23
AP003555.1-202ENST00000511013 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
AP003555.1-202ENST00000511013 PFKFB1P16118 471 aa16.48■□□□□ 0.23
AP003555.1-202ENST00000511013 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
AP003555.1-202ENST00000511013 SSRP1Q08945 709 aaKnown RBP16.48■□□□□ 0.23
AP003555.1-202ENST00000511013 VPS37DQ86XT2 251 aa16.48■□□□□ 0.23
AP003555.1-202ENST00000511013 HELBQ8NG08 1087 aaPredicted RBP16.48■□□□□ 0.23
AP003555.1-202ENST00000511013 CDCA7Q9BWT1 371 aaPredicted RBP16.48■□□□□ 0.23
AP003555.1-202ENST00000511013 IFIT3O14879 490 aaKnown RBP16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 MBD4O95243 580 aa16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 TNNT1P13805 278 aa16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 U2AF2P26368 475 aaKnown RBP eCLIP16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 CDC27P30260 824 aa16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 CCDC152Q4G0S7 254 aa16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 AKNAD1Q5T1N1 836 aa16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 MAGEB6Q8N7X4 407 aa16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 GJB4Q9NTQ9 266 aa16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 CCDC87Q9NVE4 849 aa16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 RTL9Q8NET4 1388 aa16.47■□□□□ 0.23
AP003555.1-202ENST00000511013 NEDD4P46934 1319 aa16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 FAM237AA0A1B0GTK4 181 aa16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 CTIFO43310 598 aaKnown RBP16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 SYKP43405 635 aa16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 RASGRF1Q13972 1273 aa16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 SART3Q15020 963 aaKnown RBP16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 NTRK3Q16288 839 aa16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 SUSD4Q5VX71 490 aa16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 MFSD6Q6ZSS7 791 aa16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 MICU3Q86XE3 530 aa16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 TMTC2Q8N394 836 aa16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 NID2Q14112 1375 aa16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 PNPLA7Q6ZV29 1317 aa16.46■□□□□ 0.23
AP003555.1-202ENST00000511013 IKBKBO14920 756 aa16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 CUTAO60888 179 aa16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 SKILP12757 684 aa16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 IGHMBP2P38935 993 aaKnown RBP16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 SYCP1Q15431 976 aa16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 C16orf45Q96MC5 204 aaPredicted RBP16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 BCL2L12Q9HB09 334 aa16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 ZSWIM5Q9P217 1185 aa16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 DENND2AQ9ULE3 1009 aa16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 WNK3Q9BYP7 1800 aa16.46■□□□□ 0.22
AP003555.1-202ENST00000511013 TIAM2Q8IVF5 1701 aa16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 GSG1L2A8MUP6 293 aa16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 FMNL1O95466 1100 aaPredicted RBP16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 PRKCSHP14314 528 aaPredicted RBP16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 IFNAR1P17181 557 aa16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 SAFBQ15424 915 aaKnown RBP eCLIP16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 DPCR1Q3MIW9 517 aa16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 ERCC4Q92889 916 aaPredicted RBP16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 PHKBQ93100 1093 aa16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 ARMT1Q9H993 441 aa16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 EPB41L4AQ9HCS5 686 aaPredicted RBP16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 KCND1Q9NSA2 647 aa16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 HPSEQ9Y251 543 aa16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
AP003555.1-202ENST00000511013 A0A087WWV3 80 aa16.44■□□□□ 0.22
AP003555.1-202ENST00000511013 CCDC196A0A1B0GTZ2 297 aa16.44■□□□□ 0.22
AP003555.1-202ENST00000511013 NRDCO43847 1150 aa16.44■□□□□ 0.22
AP003555.1-202ENST00000511013 MARCKSP29966 332 aaPredicted RBP16.44■□□□□ 0.22
AP003555.1-202ENST00000511013 RCAN1P53805 252 aa16.44■□□□□ 0.22
AP003555.1-202ENST00000511013 CTDSPL2Q05D32 466 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms