RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 BEND4Q6ZU67 534 aa7.8□□□□□ -1.16
TRIM4-205ENST00000496896 C2CD4AQ8NCU7 369 aaPredicted RBP7.8□□□□□ -1.16
TRIM4-205ENST00000496896 SPG7Q9UQ90 795 aa7.8□□□□□ -1.16
TRIM4-205ENST00000496896 ADAMTS4O75173 837 aa7.79□□□□□ -1.16
TRIM4-205ENST00000496896 CTSBP07858 339 aa7.79□□□□□ -1.16
TRIM4-205ENST00000496896 ADH5P11766 374 aa7.79□□□□□ -1.16
TRIM4-205ENST00000496896 SPINK2P20155 84 aa7.79□□□□□ -1.16
TRIM4-205ENST00000496896 NFIAQ12857 509 aa7.79□□□□□ -1.16
TRIM4-205ENST00000496896 TRIM42Q8IWZ5 723 aa7.79□□□□□ -1.16
TRIM4-205ENST00000496896 DBNDD2Q9BQY9 259 aa7.79□□□□□ -1.16
TRIM4-205ENST00000496896 GSX1Q9H4S2 264 aaPredicted RBP7.79□□□□□ -1.16
TRIM4-205ENST00000496896 KRT82Q9NSB4 513 aa7.79□□□□□ -1.16
TRIM4-205ENST00000496896 MAP4P27816 1152 aaKnown RBP7.78□□□□□ -1.16
TRIM4-205ENST00000496896 EZH1Q92800 747 aaPredicted RBP7.78□□□□□ -1.16
TRIM4-205ENST00000496896 YIPF2Q9BWQ6 316 aa7.78□□□□□ -1.16
TRIM4-205ENST00000496896 OSBPL7Q9BZF2 842 aa7.78□□□□□ -1.16
TRIM4-205ENST00000496896 HMX2A2RU54 273 aa7.77□□□□□ -1.17
TRIM4-205ENST00000496896 PRPF40AO75400 957 aaKnown RBP7.77□□□□□ -1.17
TRIM4-205ENST00000496896 ECEL1O95672 775 aa7.77□□□□□ -1.17
TRIM4-205ENST00000496896 LDHBP07195 334 aaKnown RBP7.77□□□□□ -1.17
TRIM4-205ENST00000496896 DRD2P14416 443 aa7.77□□□□□ -1.17
TRIM4-205ENST00000496896 CEP44Q9C0F1 390 aa7.77□□□□□ -1.17
TRIM4-205ENST00000496896 KCNF1Q9H3M0 494 aa7.77□□□□□ -1.17
TRIM4-205ENST00000496896 GPN3Q9UHW5 284 aaPredicted RBP7.77□□□□□ -1.17
TRIM4-205ENST00000496896 WWC3Q9ULE0 1092 aa7.77□□□□□ -1.17
TRIM4-205ENST00000496896 ANKRD33BA6NCL7 494 aa7.76□□□□□ -1.17
TRIM4-205ENST00000496896 AOC2O75106 756 aa7.76□□□□□ -1.17
TRIM4-205ENST00000496896 GSTP1P09211 210 aaKnown RBP7.76□□□□□ -1.17
TRIM4-205ENST00000496896 SGO2Q562F6 1265 aa7.76□□□□□ -1.17
TRIM4-205ENST00000496896 PDZD3Q86UT5 571 aa7.76□□□□□ -1.17
TRIM4-205ENST00000496896 ZDHHC13Q8IUH4 622 aa7.76□□□□□ -1.17
TRIM4-205ENST00000496896 SETDB2Q96T68 719 aa7.76□□□□□ -1.17
TRIM4-205ENST00000496896 C12orf49Q9H741 205 aa7.76□□□□□ -1.17
TRIM4-205ENST00000496896 RAD18Q9NS91 495 aa7.76□□□□□ -1.17
TRIM4-205ENST00000496896 FAM8A1Q9UBU6 413 aa7.76□□□□□ -1.17
TRIM4-205ENST00000496896 AKAP2Q9Y2D5 859 aa7.76□□□□□ -1.17
TRIM4-205ENST00000496896 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.75□□□□□ -1.17
TRIM4-205ENST00000496896 WNT11O96014 354 aa7.75□□□□□ -1.17
TRIM4-205ENST00000496896 NME2P22392 152 aa7.75□□□□□ -1.17
TRIM4-205ENST00000496896 GNA15P30679 374 aa7.75□□□□□ -1.17
TRIM4-205ENST00000496896 USP11P51784 963 aa7.75□□□□□ -1.17
TRIM4-205ENST00000496896 CPSF6Q16630 551 aaKnown RBP eCLIP7.75□□□□□ -1.17
TRIM4-205ENST00000496896 SCARA3Q6AZY7 606 aa7.75□□□□□ -1.17
TRIM4-205ENST00000496896 DNAJC14Q6Y2X3 702 aaPredicted RBP7.75□□□□□ -1.17
TRIM4-205ENST00000496896 DTX1Q86Y01 620 aa7.75□□□□□ -1.17
TRIM4-205ENST00000496896 NECAB3Q96P71 396 aaPredicted RBP7.75□□□□□ -1.17
TRIM4-205ENST00000496896 WDR18Q9BV38 432 aa7.75□□□□□ -1.17
TRIM4-205ENST00000496896 ACTL7BQ9Y614 415 aa7.75□□□□□ -1.17
TRIM4-205ENST00000496896 FAM95CA0A1B0GW59 222 aa7.74□□□□□ -1.17
TRIM4-205ENST00000496896 ERCC3P19447 782 aa7.74□□□□□ -1.17
TRIM4-205ENST00000496896 ARNTP27540 789 aa7.74□□□□□ -1.17
TRIM4-205ENST00000496896 ZNF157P51786 506 aaPredicted RBP7.74□□□□□ -1.17
TRIM4-205ENST00000496896 PDE3AQ14432 1141 aa7.74□□□□□ -1.17
TRIM4-205ENST00000496896 KIF4BQ2VIQ3 1234 aa7.74□□□□□ -1.17
TRIM4-205ENST00000496896 CDPF1Q6NVV7 123 aa7.74□□□□□ -1.17
TRIM4-205ENST00000496896 PAOXQ6QHF9 649 aa7.74□□□□□ -1.17
TRIM4-205ENST00000496896 SULF2Q8IWU5 870 aa7.74□□□□□ -1.17
TRIM4-205ENST00000496896 EMILIN2Q9BXX0 1053 aa7.74□□□□□ -1.17
TRIM4-205ENST00000496896 CCDC86Q9H6F5 360 aaKnown RBP7.74□□□□□ -1.17
TRIM4-205ENST00000496896 ADGRE2Q9UHX3 823 aa7.74□□□□□ -1.17
TRIM4-205ENST00000496896 SLFN14P0C7P3 912 aa7.73□□□□□ -1.17
TRIM4-205ENST00000496896 EAPPQ56P03 285 aaPredicted RBP7.73□□□□□ -1.17
TRIM4-205ENST00000496896 AKAP4Q5JQC9 854 aa7.73□□□□□ -1.17
TRIM4-205ENST00000496896 NPAS4Q8IUM7 802 aa7.73□□□□□ -1.17
TRIM4-205ENST00000496896 ACSS3Q9H6R3 686 aa7.73□□□□□ -1.17
TRIM4-205ENST00000496896 CACNA2D2Q9NY47 1150 aa7.73□□□□□ -1.17
TRIM4-205ENST00000496896 SAMM50Q9Y512 469 aa7.73□□□□□ -1.17
TRIM4-205ENST00000496896 ENC1O14682 589 aa7.72□□□□□ -1.17
TRIM4-205ENST00000496896 RXRBP28702 533 aa7.72□□□□□ -1.17
TRIM4-205ENST00000496896 ZNF252P-AS1Q0IIN9 211 aa7.72□□□□□ -1.17
TRIM4-205ENST00000496896 MAP7Q14244 749 aa7.72□□□□□ -1.17
TRIM4-205ENST00000496896 OGFOD2Q6N063 350 aa7.72□□□□□ -1.17
TRIM4-205ENST00000496896 GIMAP7Q8NHV1 300 aa7.72□□□□□ -1.17
TRIM4-205ENST00000496896 FBLIM1Q8WUP2 373 aa7.72□□□□□ -1.17
TRIM4-205ENST00000496896 CRIM1Q9NZV1 1036 aa7.72□□□□□ -1.17
TRIM4-205ENST00000496896 PCDHGC5Q9Y5F6 944 aa7.72□□□□□ -1.17
TRIM4-205ENST00000496896 ZNF862O60290 1169 aa7.71□□□□□ -1.18
TRIM4-205ENST00000496896 DYMQ7RTS9 669 aa7.71□□□□□ -1.18
TRIM4-205ENST00000496896 FAM105AQ9NUU6 356 aa7.71□□□□□ -1.18
TRIM4-205ENST00000496896 PPP1R9AQ9ULJ8 1098 aa7.71□□□□□ -1.18
TRIM4-205ENST00000496896 AP4E1Q9UPM8 1137 aa7.71□□□□□ -1.18
TRIM4-205ENST00000496896 AK5Q9Y6K8 562 aa7.71□□□□□ -1.18
TRIM4-205ENST00000496896 PRR19A6NJB7 356 aa7.7□□□□□ -1.18
TRIM4-205ENST00000496896 TMPRSS2O15393 492 aa7.7□□□□□ -1.18
TRIM4-205ENST00000496896 USP17L7P0C7H9 530 aa7.7□□□□□ -1.18
TRIM4-205ENST00000496896 EIF4BP23588 611 aaKnown RBP7.7□□□□□ -1.18
TRIM4-205ENST00000496896 ASPAP45381 313 aa7.7□□□□□ -1.18
TRIM4-205ENST00000496896 ID3Q02535 119 aa7.7□□□□□ -1.18
TRIM4-205ENST00000496896 SHKBP1Q8TBC3 707 aa7.7□□□□□ -1.18
TRIM4-205ENST00000496896 STK35Q8TDR2 534 aa7.7□□□□□ -1.18
TRIM4-205ENST00000496896 WDR89Q96FK6 387 aaPredicted RBP7.7□□□□□ -1.18
TRIM4-205ENST00000496896 METTL22Q9BUU2 404 aaPredicted RBP7.7□□□□□ -1.18
TRIM4-205ENST00000496896 ATXN3LQ9H3M9 355 aa7.7□□□□□ -1.18
TRIM4-205ENST00000496896 SEMA6CQ9H3T2 930 aa7.7□□□□□ -1.18
TRIM4-205ENST00000496896 LIG1P18858 919 aa7.69□□□□□ -1.18
TRIM4-205ENST00000496896 BMP6P22004 513 aa7.69□□□□□ -1.18
TRIM4-205ENST00000496896 NFKBIBQ15653 356 aa7.69□□□□□ -1.18
TRIM4-205ENST00000496896 TPTE2Q6XPS3 522 aa7.69□□□□□ -1.18
TRIM4-205ENST00000496896 SV2BQ7L1I2 683 aa7.69□□□□□ -1.18
TRIM4-205ENST00000496896 PRKAG2Q9UGJ0 569 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms