RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	AFDN	P55196	1824 aa	Known RBP	7.4	□□□□□ -1.23
FN1-223	ENST00000490833	C5	P01031	1676 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	NHSL1	Q5SYE7	1610 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	DISP2	A7MBM2	1401 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	GOLGA6L19	H0YKK7	550 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	TOM1	O60784	492 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	KIN	O60870	393 aa	Known RBP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	COL9A1	P20849	921 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	PDIA3	P30101	505 aa	Known RBP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	EIF5	P55010	431 aa	Known RBP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	SAFB	Q15424	915 aa	Known RBP eCLIP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	SF3A1	Q15459	793 aa	Known RBP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	CCDC178	Q5BJE1	867 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	CAVIN4	Q5BKX8	364 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	CT47A1	Q5JQC4	288 aa	Predicted RBP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	SLC9C2	Q5TAH2	1124 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	ADAL	Q6DHV7	355 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	RBM43	Q6ZSC3	357 aa	Known RBP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	DNAJC10	Q8IXB1	793 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	FAM177A1	Q8N128	213 aa	Predicted RBP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	BICD2	Q8TD16	824 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	LEO1	Q8WVC0	666 aa	Predicted RBP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	AIDA	Q96BJ3	306 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	PRIMPOL	Q96LW4	560 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	ARX	Q96QS3	562 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	CLSTN2	Q9H4D0	955 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	ANO10	Q9NW15	660 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	RTEL1	Q9NZ71	1219 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	ANGEL1	Q9UNK9	670 aa	Known RBP	7.39	□□□□□ -1.23
FN1-223	ENST00000490833	CEP131	Q9UPN4	1083 aa		7.39	□□□□□ -1.23
FN1-223	ENST00000490833	STRCP1	A6NGW2	1772 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	ATRN	O75882	1429 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	MAST3	O60307	1309 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	PDS5A	Q29RF7	1337 aa	Known RBP	7.38	□□□□□ -1.23
FN1-223	ENST00000490833	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	7.38	□□□□□ -1.23
FN1-223	ENST00000490833	BMP15	O95972	392 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	FGA	P02671	866 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	SLC3A2	P08195	630 aa	Known RBP	7.38	□□□□□ -1.23
FN1-223	ENST00000490833	CALM1	P0DP23	149 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	CALM2	P0DP24	149 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	CALM3	P0DP25	149 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	GTF2E1	P29083	439 aa	Predicted RBP	7.38	□□□□□ -1.23
FN1-223	ENST00000490833	ADD2	P35612	726 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	BCAM	P50895	628 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	RBM6	P78332	1123 aa	Known RBP	7.38	□□□□□ -1.23
FN1-223	ENST00000490833	UBE4A	Q14139	1066 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	GLIPR1L2	Q4G1C9	344 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	LRRC24	Q50LG9	513 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	RC3H1	Q5TC82	1133 aa	Known RBP	7.38	□□□□□ -1.23
FN1-223	ENST00000490833	TRIM22	Q8IYM9	498 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	FAM89A	Q96GI7	184 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	C8orf76	Q96K31	380 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	TIGD1	Q96MW7	591 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	PYM1	Q9BRP8	204 aa	Known RBP	7.38	□□□□□ -1.23
FN1-223	ENST00000490833	ANKRD2	Q9GZV1	360 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	POLR3E	Q9NVU0	708 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	RBM27	Q9P2N5	1060 aa	Known RBP	7.38	□□□□□ -1.23
FN1-223	ENST00000490833	ASAP1	Q9ULH1	1129 aa		7.38	□□□□□ -1.23
FN1-223	ENST00000490833	MORC2	Q9Y6X9	1032 aa	Predicted RBP	7.38	□□□□□ -1.23
FN1-223	ENST00000490833	AHDC1	Q5TGY3	1603 aa	Predicted RBP	7.38	□□□□□ -1.23
FN1-223	ENST00000490833	PNPLA7	Q6ZV29	1317 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	PTPDC1	A2A3K4	754 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	SMTNL1	A8MU46	457 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	BECN2	A8MW95	431 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	GPAA1	O43292	621 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	APP	P05067	770 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	FAM160A1	Q05DH4	1040 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	SCRN1	Q12765	414 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	GNL2	Q13823	731 aa	Known RBP	7.37	□□□□□ -1.23
FN1-223	ENST00000490833	STX1A	Q16623	288 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	SPTY2D1	Q68D10	685 aa	Predicted RBP	7.37	□□□□□ -1.23
FN1-223	ENST00000490833	KANK3	Q6NY19	840 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	SGMS1	Q86VZ5	419 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	NECAB1	Q8N987	351 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	SPATA5	Q8NB90	893 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	NSUN7	Q8NE18	718 aa	Known RBP	7.37	□□□□□ -1.23
FN1-223	ENST00000490833	FBXO18	Q8NFZ0	1043 aa		7.37	□□□□□ -1.23
FN1-223	ENST00000490833	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.37	□□□□□ -1.23
FN1-223	ENST00000490833	NUP188	Q5SRE5	1749 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	SPATA31A1	Q5TZJ5	1347 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	STK36	Q9NRP7	1315 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	LOC102724428	A0A0B4J2F2	783 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	CCDC69	A6NI79	296 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	KIF2A	O00139	706 aa	Predicted RBP	7.36	□□□□□ -1.23
FN1-223	ENST00000490833	DPYSL4	O14531	572 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	CCP110	O43303	1012 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	PRC1	O43663	620 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	PPP6R2	O75170	966 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	GADD45B	O75293	160 aa	Predicted RBP	7.36	□□□□□ -1.23
FN1-223	ENST00000490833	PRKCSH	P14314	528 aa	Predicted RBP	7.36	□□□□□ -1.23
FN1-223	ENST00000490833	FGFR2	P21802	821 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	CDC25B	P30305	580 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	ATP6V1A	P38606	617 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	SIK1	P57059	783 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	GSDMD	P57764	484 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	REST	Q13127	1097 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	SEMA3F	Q13275	785 aa		7.36	□□□□□ -1.23
FN1-223	ENST00000490833	SLC10A5	Q5PT55	438 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms