RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 PPP2R3BQ9Y5P8 575 aa21.17■□□□□ 0.98
ERCC3-207ENST00000490062 RFX7Q2KHR2 1363 aa21.17■□□□□ 0.98
ERCC3-207ENST00000490062 MYH7P12883 1935 aa21.16■□□□□ 0.98
ERCC3-207ENST00000490062 NPM3O75607 178 aaKnown RBP21.16■□□□□ 0.98
ERCC3-207ENST00000490062 TDRD3Q9H7E2 651 aaKnown RBP21.16■□□□□ 0.98
ERCC3-207ENST00000490062 TCRBV5S4A2TA0A5A2 114 aa21.15■□□□□ 0.98
ERCC3-207ENST00000490062 RHBDL3P58872 404 aa21.15■□□□□ 0.98
ERCC3-207ENST00000490062 TNFAIP1Q13829 316 aa21.15■□□□□ 0.98
ERCC3-207ENST00000490062 UBE3CQ15386 1083 aa21.15■□□□□ 0.98
ERCC3-207ENST00000490062 KRT26Q7Z3Y9 468 aa21.15■□□□□ 0.98
ERCC3-207ENST00000490062 SULF1Q8IWU6 871 aa21.15■□□□□ 0.98
ERCC3-207ENST00000490062 IDI2Q9BXS1 227 aa21.15■□□□□ 0.98
ERCC3-207ENST00000490062 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.15■□□□□ 0.981e-6■□□□□ 10.8
ERCC3-207ENST00000490062 PDE6AP16499 860 aa21.14■□□□□ 0.97
ERCC3-207ENST00000490062 ADD2P35612 726 aa21.14■□□□□ 0.97
ERCC3-207ENST00000490062 BTDP43251 543 aa21.14■□□□□ 0.97
ERCC3-207ENST00000490062 C1QTNF8P60827 252 aa21.14■□□□□ 0.97
ERCC3-207ENST00000490062 ZSCAN25Q6NSZ9 544 aa21.14■□□□□ 0.97
ERCC3-207ENST00000490062 CDC42EP5Q6NZY7 148 aa21.14■□□□□ 0.97
ERCC3-207ENST00000490062 FAM83AQ86UY5 434 aa21.14■□□□□ 0.97
ERCC3-207ENST00000490062 RPAP1Q9BWH6 1393 aaPredicted RBP21.13■□□□□ 0.97
ERCC3-207ENST00000490062 ZFYP08048 801 aaPredicted RBP21.13■□□□□ 0.97
ERCC3-207ENST00000490062 PLCG2P16885 1265 aa21.13■□□□□ 0.97
ERCC3-207ENST00000490062 SLC9C2Q5TAH2 1124 aa21.13■□□□□ 0.97
ERCC3-207ENST00000490062 ADGRA1Q86SQ6 560 aa21.13■□□□□ 0.97
ERCC3-207ENST00000490062 MAGEB6Q8N7X4 407 aa21.13■□□□□ 0.97
ERCC3-207ENST00000490062 EVI5LQ96CN4 794 aa21.13■□□□□ 0.97
ERCC3-207ENST00000490062 GLIS2Q9BZE0 524 aaPredicted RBP21.13■□□□□ 0.97
ERCC3-207ENST00000490062 TRPM7Q96QT4 1865 aa21.13■□□□□ 0.97
ERCC3-207ENST00000490062 CLRN2A0PK11 232 aa21.12■□□□□ 0.97
ERCC3-207ENST00000490062 BAG3O95817 575 aa21.12■□□□□ 0.97
ERCC3-207ENST00000490062 CYP7A1P22680 504 aa21.12■□□□□ 0.97
ERCC3-207ENST00000490062 LRRFIP1Q32MZ4 808 aaKnown RBP21.12■□□□□ 0.97
ERCC3-207ENST00000490062 TMOD2Q9NZR1 351 aa21.12■□□□□ 0.97
ERCC3-207ENST00000490062 USP48Q86UV5 1035 aa21.11■□□□□ 0.97
ERCC3-207ENST00000490062 DEFB129Q9H1M3 183 aa21.11■□□□□ 0.97
ERCC3-207ENST00000490062 USP40Q9NVE5 1235 aa21.11■□□□□ 0.97
ERCC3-207ENST00000490062 ZNF532Q9HCE3 1301 aa21.1■□□□□ 0.97
ERCC3-207ENST00000490062 COL2A1P02458 1487 aaPredicted RBP21.1■□□□□ 0.97
ERCC3-207ENST00000490062 ADM5C9JUS6 153 aa21.1■□□□□ 0.97
ERCC3-207ENST00000490062 ENTPD3O75355 529 aa21.1■□□□□ 0.97
ERCC3-207ENST00000490062 WDHD1O75717 1129 aaPredicted RBP21.1■□□□□ 0.97
ERCC3-207ENST00000490062 TNNI2P48788 182 aa21.1■□□□□ 0.97
ERCC3-207ENST00000490062 RIOK1Q9BRS2 568 aaKnown RBP21.1■□□□□ 0.97
ERCC3-207ENST00000490062 CNTNAP1P78357 1384 aa21.1■□□□□ 0.97
ERCC3-207ENST00000490062 RASA3Q14644 834 aa21.09■□□□□ 0.97
ERCC3-207ENST00000490062 FAM151AQ8WW52 585 aa21.09■□□□□ 0.97
ERCC3-207ENST00000490062 NOL10Q9BSC4 688 aaKnown RBP21.09■□□□□ 0.97
ERCC3-207ENST00000490062 VEZTQ9HBM0 779 aa21.09■□□□□ 0.97
ERCC3-207ENST00000490062 FOCADQ5VW36 1801 aa21.08■□□□□ 0.97
ERCC3-207ENST00000490062 TRAF5O00463 557 aa21.08■□□□□ 0.97
ERCC3-207ENST00000490062 RNF113AO15541 343 aaKnown RBP21.08■□□□□ 0.97
ERCC3-207ENST00000490062 TTC22Q5TAA0 569 aa21.08■□□□□ 0.97
ERCC3-207ENST00000490062 CDCA5Q96FF9 252 aa21.08■□□□□ 0.97
ERCC3-207ENST00000490062 TEPSINQ96N21 525 aa21.08■□□□□ 0.97
ERCC3-207ENST00000490062 AATFQ9NY61 560 aaKnown RBP eCLIP21.08■□□□□ 0.97
ERCC3-207ENST00000490062 FAM198AQ9UFP1 575 aa21.08■□□□□ 0.97
ERCC3-207ENST00000490062 APLP1P51693 650 aa21.07■□□□□ 0.96
ERCC3-207ENST00000490062 NFIAQ12857 509 aa21.07■□□□□ 0.96
ERCC3-207ENST00000490062 APPBP2Q92624 585 aa21.07■□□□□ 0.96
ERCC3-207ENST00000490062 ATRNL1Q5VV63 1379 aa21.07■□□□□ 0.96
ERCC3-207ENST00000490062 CDK5RAP2Q96SN8 1893 aa21.07■□□□□ 0.96
ERCC3-207ENST00000490062 FKBP1BP68106 108 aa21.06■□□□□ 0.96
ERCC3-207ENST00000490062 CST9Q5W186 159 aa21.06■□□□□ 0.96
ERCC3-207ENST00000490062 FSD1Q9BTV5 496 aa21.06■□□□□ 0.96
ERCC3-207ENST00000490062 TCP10L2B9ZVM9 353 aa21.05■□□□□ 0.96
ERCC3-207ENST00000490062 GSPT1P15170 499 aaKnown RBP21.05■□□□□ 0.96
ERCC3-207ENST00000490062 CACNB3P54284 484 aa21.05■□□□□ 0.96
ERCC3-207ENST00000490062 TEX11Q8IYF3 940 aa21.05■□□□□ 0.96
ERCC3-207ENST00000490062 SH3RF3Q8TEJ3 882 aaPredicted RBP21.05■□□□□ 0.96
ERCC3-207ENST00000490062 DDX4Q9NQI0 724 aaKnown RBP21.05■□□□□ 0.96
ERCC3-207ENST00000490062 MAGEB6P1A0A0J9YX57 407 aa21.04■□□□□ 0.96
ERCC3-207ENST00000490062 HSPA6P17066 643 aa21.04■□□□□ 0.96
ERCC3-207ENST00000490062 RGS3P49796 1198 aa21.04■□□□□ 0.96
ERCC3-207ENST00000490062 DYNLL1P63167 89 aaKnown RBP21.04■□□□□ 0.96
ERCC3-207ENST00000490062 FMR1Q06787 632 aaKnown RBP eCLIP21.04■□□□□ 0.96
ERCC3-207ENST00000490062 SUPT20HL1Q3ZLR7 823 aa21.04■□□□□ 0.96
ERCC3-207ENST00000490062 ZMYM1Q5SVZ6 1142 aa21.04■□□□□ 0.96
ERCC3-207ENST00000490062 MIGA1Q8NAN2 632 aa21.04■□□□□ 0.96
ERCC3-207ENST00000490062 CREBZFQ9NS37 354 aa21.04■□□□□ 0.96
ERCC3-207ENST00000490062 SSC5DA1L4H1 1573 aa21.04■□□□□ 0.96
ERCC3-207ENST00000490062 PAPPA2Q9BXP8 1791 aa21.04■□□□□ 0.96
ERCC3-207ENST00000490062 TMEM88BA6NKF7 163 aa21.03■□□□□ 0.96
ERCC3-207ENST00000490062 CHGBP05060 677 aa21.03■□□□□ 0.96
ERCC3-207ENST00000490062 MAP3K11Q16584 847 aa21.03■□□□□ 0.96
ERCC3-207ENST00000490062 OSBP2Q969R2 916 aa21.03■□□□□ 0.96
ERCC3-207ENST00000490062 HOOK2Q96ED9 719 aa21.03■□□□□ 0.96
ERCC3-207ENST00000490062 TMEM39BQ9GZU3 492 aa21.03■□□□□ 0.96
ERCC3-207ENST00000490062 PUS7LQ9H0K6 701 aaKnown RBP21.03■□□□□ 0.96
ERCC3-207ENST00000490062 MKRN1Q9UHC7 482 aaKnown RBP21.03■□□□□ 0.96
ERCC3-207ENST00000490062 SCAF8Q9UPN6 1271 aaKnown RBP21.03■□□□□ 0.96
ERCC3-207ENST00000490062 AK9Q5TCS8 1911 aa21.03■□□□□ 0.96
ERCC3-207ENST00000490062 UNCXA6NJT0 531 aa21.02■□□□□ 0.96
ERCC3-207ENST00000490062 CELF2O95319 508 aaKnown RBP21.02■□□□□ 0.96
ERCC3-207ENST00000490062 NF2P35240 595 aa21.02■□□□□ 0.96
ERCC3-207ENST00000490062 MAP3K10Q02779 954 aa21.02■□□□□ 0.96
ERCC3-207ENST00000490062 DLK2Q6UY11 383 aa21.02■□□□□ 0.96
ERCC3-207ENST00000490062 OSBPL5Q9H0X9 879 aaPredicted RBP21.02■□□□□ 0.96
ERCC3-207ENST00000490062 DDX60LQ5H9U9 1706 aaKnown RBP21.01■□□□□ 0.95
ERCC3-207ENST00000490062 TRIM6-TRIM34B2RNG4 842 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms