RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CUEDC1Q9NWM3 386 aaPredicted RBP7.9□□□□□ -1.14
CDHR3-213ENST00000488386 NXF1Q9UBU9 619 aaKnown RBP7.9□□□□□ -1.14
CDHR3-213ENST00000488386 RTCBQ9Y3I0 505 aaKnown RBP7.9□□□□□ -1.14
CDHR3-213ENST00000488386 PARP3Q9Y6F1 533 aa7.9□□□□□ -1.14
CDHR3-213ENST00000488386 CHD4Q14839 1912 aa7.9□□□□□ -1.15
CDHR3-213ENST00000488386 GOLGB1Q14789 3259 aaKnown RBP7.89□□□□□ -1.15
CDHR3-213ENST00000488386 CNTNAP4Q9C0A0 1308 aa7.89□□□□□ -1.15
CDHR3-213ENST00000488386 MMP10P09238 476 aa7.89□□□□□ -1.15
CDHR3-213ENST00000488386 U2AF1L5P0DN76 240 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-213ENST00000488386 U2AF1Q01081 240 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDHR3-213ENST00000488386 DCTN1Q14203 1278 aa7.89□□□□□ -1.15
CDHR3-213ENST00000488386 INTS5Q6P9B9 1019 aaKnown RBP7.89□□□□□ -1.15
CDHR3-213ENST00000488386 CFAP53Q96M91 514 aa7.89□□□□□ -1.15
CDHR3-213ENST00000488386 RBM19Q9Y4C8 960 aaKnown RBP7.89□□□□□ -1.15
CDHR3-213ENST00000488386 SIPA1L3O60292 1781 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-213ENST00000488386 UBR2Q8IWV8 1755 aa7.89□□□□□ -1.15
CDHR3-213ENST00000488386 CARNS1A5YM72 827 aa7.88□□□□□ -1.15
CDHR3-213ENST00000488386 TERTO14746 1132 aaKnown RBP7.88□□□□□ -1.15
CDHR3-213ENST00000488386 RPS6KA4O75676 772 aa7.88□□□□□ -1.15
CDHR3-213ENST00000488386 GYS1P13807 737 aa7.88□□□□□ -1.15
CDHR3-213ENST00000488386 RFC4P35249 363 aa7.88□□□□□ -1.15
CDHR3-213ENST00000488386 NFX1Q12986 1120 aaKnown RBP7.88□□□□□ -1.15
CDHR3-213ENST00000488386 DDX10Q13206 875 aaKnown RBP7.88□□□□□ -1.15
CDHR3-213ENST00000488386 MCM10Q7L590 875 aa7.88□□□□□ -1.15
CDHR3-213ENST00000488386 TIMMDC1Q9NPL8 285 aa7.88□□□□□ -1.15
CDHR3-213ENST00000488386 ZBTB1Q9Y2K1 713 aa7.88□□□□□ -1.15
CDHR3-213ENST00000488386 KIAA1551Q9HCM1 1747 aa7.88□□□□□ -1.15
CDHR3-213ENST00000488386 PRAMEF22A3QJZ6 481 aa7.87□□□□□ -1.15
CDHR3-213ENST00000488386 GNAT3A8MTJ3 354 aa7.87□□□□□ -1.15
CDHR3-213ENST00000488386 H3BM21 787 aa7.87□□□□□ -1.15
CDHR3-213ENST00000488386 THBS1P07996 1170 aa7.87□□□□□ -1.15
CDHR3-213ENST00000488386 ATP4AP20648 1035 aa7.87□□□□□ -1.15
CDHR3-213ENST00000488386 CANXP27824 592 aaKnown RBP7.87□□□□□ -1.15
CDHR3-213ENST00000488386 GTF2E1P29083 439 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-213ENST00000488386 PIP4K2AP48426 406 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-213ENST00000488386 WDR44Q5JSH3 913 aa7.87□□□□□ -1.15
CDHR3-213ENST00000488386 ZNF496Q96IT1 587 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-213ENST00000488386 HINFPQ9BQA5 517 aa7.87□□□□□ -1.15
CDHR3-213ENST00000488386 NIFKQ9BYG3 293 aaKnown RBP7.87□□□□□ -1.15
CDHR3-213ENST00000488386 DYRK1BQ9Y463 629 aa7.87□□□□□ -1.15
CDHR3-213ENST00000488386 DLG5Q8TDM6 1919 aa7.87□□□□□ -1.15
CDHR3-213ENST00000488386 ERBB4Q15303 1308 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 CYP19A1P11511 503 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-213ENST00000488386 ITGA6P23229 1130 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 TXLNAP40222 546 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 DDR1Q08345 913 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 TEFQ10587 303 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 USPL1Q5W0Q7 1092 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 SCG3Q8WXD2 468 aaKnown RBP7.86□□□□□ -1.15
CDHR3-213ENST00000488386 KLRG1Q96E93 195 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 GAS2L1Q99501 681 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-213ENST00000488386 GPAMQ9HCL2 828 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 CCDC87Q9NVE4 849 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 MIS18AQ9NYP9 233 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 NUDCQ9Y266 331 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 CD2APQ9Y5K6 639 aa7.86□□□□□ -1.15
CDHR3-213ENST00000488386 KIF13BQ9NQT8 1826 aa7.85□□□□□ -1.15
CDHR3-213ENST00000488386 SOS1Q07889 1333 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-213ENST00000488386 USP42Q9H9J4 1324 aaKnown RBP7.85□□□□□ -1.15
CDHR3-213ENST00000488386 A0A0G2JLW4 131 aa7.85□□□□□ -1.15
CDHR3-213ENST00000488386 TMEM88BA6NKF7 163 aa7.85□□□□□ -1.15
CDHR3-213ENST00000488386 EML1O00423 815 aa7.85□□□□□ -1.15
CDHR3-213ENST00000488386 PPP1R12BO60237 982 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-213ENST00000488386 PRMT3O60678 531 aa7.85□□□□□ -1.15
CDHR3-213ENST00000488386 MSX1P28360 303 aa7.85□□□□□ -1.15
CDHR3-213ENST00000488386 PSMA6P60900 246 aaKnown RBP7.85□□□□□ -1.15
CDHR3-213ENST00000488386 TEAD4Q15561 434 aa7.85□□□□□ -1.15
CDHR3-213ENST00000488386 TTC5Q8N0Z6 440 aa7.85□□□□□ -1.15
CDHR3-213ENST00000488386 PRIMPOLQ96LW4 560 aa7.85□□□□□ -1.15
CDHR3-213ENST00000488386 THUMPD2Q9BTF0 503 aaKnown RBP7.85□□□□□ -1.15
CDHR3-213ENST00000488386 PXDNLA1KZ92 1463 aa7.85□□□□□ -1.15
CDHR3-213ENST00000488386 AFDNP55196 1824 aaKnown RBP7.85□□□□□ -1.15
CDHR3-213ENST00000488386 COL15A1P39059 1388 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 A0A1B0GTH6 734 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 BTBD11A6QL63 1104 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 A1BGP04217 495 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 DPEP1P16444 411 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 WEE1P30291 646 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 NOS2P35228 1153 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 OCLNQ16625 522 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 SWI5Q1ZZU3 235 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 LCE2AQ5TA79 106 aaPredicted RBP7.84□□□□□ -1.15
CDHR3-213ENST00000488386 ZNF790Q6PG37 636 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 BICDL1Q6ZP65 573 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 NLGN1Q8N2Q7 840 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 RUBCNLQ9H714 662 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 C10orf71Q711Q0 1435 aa7.84□□□□□ -1.15
CDHR3-213ENST00000488386 CEMIPQ8WUJ3 1361 aa7.84□□□□□ -1.16
CDHR3-213ENST00000488386 HEG1Q9ULI3 1381 aa7.84□□□□□ -1.16
CDHR3-213ENST00000488386 HMGB2P26583 209 aaKnown RBP7.83□□□□□ -1.16
CDHR3-213ENST00000488386 CHRNA5P30532 468 aa7.83□□□□□ -1.16
CDHR3-213ENST00000488386 DBN1Q16643 649 aa7.83□□□□□ -1.16
CDHR3-213ENST00000488386 RIPOR1Q6ZS17 1223 aa7.83□□□□□ -1.16
CDHR3-213ENST00000488386 ZNF526Q8TF50 670 aaPredicted RBP7.83□□□□□ -1.16
CDHR3-213ENST00000488386 AIDAQ96BJ3 306 aa7.83□□□□□ -1.16
CDHR3-213ENST00000488386 ZNF837Q96EG3 531 aaPredicted RBP7.83□□□□□ -1.16
CDHR3-213ENST00000488386 C2orf49Q9BVC5 232 aaPredicted RBP7.83□□□□□ -1.16
CDHR3-213ENST00000488386 ZNF232Q9UNY5 417 aa7.83□□□□□ -1.16
CDHR3-213ENST00000488386 BCS1LQ9Y276 419 aa7.83□□□□□ -1.16
CDHR3-213ENST00000488386 SERTM1A2A2V5 107 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms