RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 FERMT3Q86UX7 667 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 GAS2L3Q86XJ1 694 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 RAB11FIP4Q86YS3 637 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 NLGN2Q8NFZ4 835 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 SGIP1Q9BQI5 828 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 MTFR1LQ9H019 292 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 CNPY2Q9Y2B0 182 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 CACNA1SQ13698 1873 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 TCHHQ07283 1943 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 RGPD3A6NKT7 1758 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 RGPD4Q7Z3J3 1758 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 GADD45BO75293 160 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 MECOMQ03112 1051 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 SKOR2Q2VWA4 1001 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 STK11IPQ8N1F8 1099 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 NLGN1Q8N2Q7 840 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 NSUN7Q8NE18 718 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 NSUN4Q96CB9 384 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 NAPBQ9H115 298 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 NAP1L2Q9ULW6 460 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 HPS5Q9UPZ3 1129 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 FSD2A1L4K1 749 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 KLRG2A4D1S0 409 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 DNM1Q05193 864 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 GRIK5Q16478 980 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 RALYLQ86SE5 291 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 USP48Q86UV5 1035 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 SMARCC2Q8TAQ2 1214 aa10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 ZNF274Q96GC6 653 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 RBM27Q9P2N5 1060 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-204ENST00000483763 MAGEB6P1A0A0J9YX57 407 aa10.42□□□□□ -0.74
CDC42SE1-204ENST00000483763 SEMA3EO15041 775 aa10.42□□□□□ -0.74
CDC42SE1-204ENST00000483763 NCLP19338 710 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-204ENST00000483763 HOXA10P31260 410 aaPredicted RBP10.42□□□□□ -0.74
CDC42SE1-204ENST00000483763 EVX2Q03828 476 aa10.42□□□□□ -0.74
CDC42SE1-204ENST00000483763 CAVIN1Q6NZI2 390 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-204ENST00000483763 OLFM4Q6UX06 510 aa10.42□□□□□ -0.74
CDC42SE1-204ENST00000483763 SYT17Q9BSW7 474 aa10.42□□□□□ -0.74
CDC42SE1-204ENST00000483763 XDHP47989 1333 aa10.42□□□□□ -0.74
CDC42SE1-204ENST00000483763 NAA16Q6N069 864 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 ZSWIM5Q9P217 1185 aa10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 POLLQ9UGP5 575 aa10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 LEMD3Q9Y2U8 911 aa10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 ZMYM6O95789 1325 aa10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 SALL1Q9NSC2 1324 aa10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 CYP2D7A0A087X1C5 515 aa10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 KLF18A0A0U1RQI7 1052 aa10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 FDPSP14324 419 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 PTMSP20962 102 aa10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 TDO2P48775 406 aa10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 IGDCC4Q8TDY8 1250 aa10.41□□□□□ -0.74
CDC42SE1-204ENST00000483763 PTPDC1A2A3K4 754 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 KDM4AO75164 1064 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 MMP10P09238 476 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 GNAT2P19087 354 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 RXRAP19793 462 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 TRDNQ13061 729 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 AKNAD1Q5T1N1 836 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 TDRD7Q8NHU6 1098 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 RBM17Q96I25 401 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 AATFQ9NY61 560 aaKnown RBP eCLIP10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 TMEM63CQ9P1W3 806 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 PARP3Q9Y6F1 533 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 PDS5AQ29RF7 1337 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 FIBPO43427 364 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 UFL1O94874 794 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 FOSBP53539 338 aa10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 LLPHQ9BRT6 129 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 ANGEL1Q9UNK9 670 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-204ENST00000483763 GOLGA8BA8MQT2 603 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 MINDY4BA8MYZ0 360 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 SH2B2O14492 632 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 BBOX1O75936 387 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 SRGNP10124 158 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 PDCP20941 246 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 PPARAQ07869 468 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 ZKSCAN3Q9BRR0 538 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 BRIP1Q9BX63 1249 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 NACAP1Q9BZK3 213 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 WDR19Q8NEZ3 1342 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 ADD1P35611 737 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 ZSCAN23Q3MJ62 389 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 RRP12Q5JTH9 1297 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 MFSD6Q6ZSS7 791 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 TMEM87AQ8NBN3 555 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 TBC1D16Q8TBP0 767 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 STAG1Q8WVM7 1258 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 CRAMP1Q96RY5 1269 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 MYL10Q9BUA6 226 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 LY9Q9HBG7 655 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 CD209Q9NNX6 404 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 GJB4Q9NTQ9 266 aa10.39□□□□□ -0.75
CDC42SE1-204ENST00000483763 XRCC6P12956 609 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 DIXDC1Q155Q3 683 aa10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 C15orf52Q6ZUT6 534 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 GOLGA6L3A6NEY3 463 aa10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 CDC27P30260 824 aa10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 GUCY1B3Q02153 619 aa10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 CTR9Q6PD62 1173 aa10.38□□□□□ -0.75
CDC42SE1-204ENST00000483763 APOA5Q6Q788 366 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms