RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	TMED8	Q6PL24	325 aa	Predicted RBP	21.84	■■□□□ 1.09
RFK-204	ENST00000479197	SCAF8	Q9UPN6	1271 aa	Known RBP	21.84	■■□□□ 1.09
RFK-204	ENST00000479197	GPR75-ASB3	A0A0A6YYF3	556 aa		21.83	■■□□□ 1.09
RFK-204	ENST00000479197	TRAF5	O00463	557 aa		21.83	■■□□□ 1.09
RFK-204	ENST00000479197	PLEKHM2	Q8IWE5	1019 aa		21.83	■■□□□ 1.09
RFK-204	ENST00000479197	MAGEB6	Q8N7X4	407 aa		21.83	■■□□□ 1.09
RFK-204	ENST00000479197	TMOD2	Q9NZR1	351 aa		21.83	■■□□□ 1.09
RFK-204	ENST00000479197	TNFAIP1	Q13829	316 aa		21.82	■■□□□ 1.08
RFK-204	ENST00000479197	CDC42EP5	Q6NZY7	148 aa		21.82	■■□□□ 1.08
RFK-204	ENST00000479197	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	21.82	■■□□□ 1.08
RFK-204	ENST00000479197	MAP4K4	O95819	1239 aa	Predicted RBP	21.81	■■□□□ 1.08
RFK-204	ENST00000479197	CYP7A1	P22680	504 aa		21.81	■■□□□ 1.08
RFK-204	ENST00000479197	SLC9C2	Q5TAH2	1124 aa		21.81	■■□□□ 1.08
RFK-204	ENST00000479197	ADGRA1	Q86SQ6	560 aa		21.81	■■□□□ 1.08
RFK-204	ENST00000479197	NOL10	Q9BSC4	688 aa	Known RBP	21.81	■■□□□ 1.08
RFK-204	ENST00000479197	OSBPL3	Q9H4L5	887 aa		21.81	■■□□□ 1.08
RFK-204	ENST00000479197	USP40	Q9NVE5	1235 aa		21.81	■■□□□ 1.08
RFK-204	ENST00000479197	PDE6A	P16499	860 aa		21.8	■■□□□ 1.08
RFK-204	ENST00000479197	PDE4A	P27815	886 aa		21.8	■■□□□ 1.08
RFK-204	ENST00000479197	CACNB3	P54284	484 aa		21.8	■■□□□ 1.08
RFK-204	ENST00000479197	DEFB129	Q9H1M3	183 aa		21.8	■■□□□ 1.08
RFK-204	ENST00000479197	PPP4R2	Q9NY27	417 aa		21.8	■■□□□ 1.08
RFK-204	ENST00000479197	TCP10L2	B9ZVM9	353 aa		21.8	■■□□□ 1.08
RFK-204	ENST00000479197	FMR1	Q06787	632 aa	Known RBP eCLIP	21.8	■■□□□ 1.08	4e-12	■■□□□ 11.5
RFK-204	ENST00000479197	FKBP1C	Q5VVH2	108 aa		21.8	■■□□□ 1.08
RFK-204	ENST00000479197	DLK2	Q6UY11	383 aa		21.8	■■□□□ 1.08
RFK-204	ENST00000479197	KBTBD3	Q8NAB2	608 aa		21.8	■■□□□ 1.08
RFK-204	ENST00000479197	PPP2R3B	Q9Y5P8	575 aa		21.8	■■□□□ 1.08
RFK-204	ENST00000479197	BAG3	O95817	575 aa		21.79	■■□□□ 1.08
RFK-204	ENST00000479197	TNNI2	P48788	182 aa		21.79	■■□□□ 1.08
RFK-204	ENST00000479197	CDCA5	Q96FF9	252 aa		21.79	■■□□□ 1.08
RFK-204	ENST00000479197	AATF	Q9NY61	560 aa	Known RBP eCLIP	21.79	■■□□□ 1.08
RFK-204	ENST00000479197	ZNF532	Q9HCE3	1301 aa		21.79	■■□□□ 1.08
RFK-204	ENST00000479197	ADD2	P35612	726 aa		21.78	■■□□□ 1.08
RFK-204	ENST00000479197	RHBDL3	P58872	404 aa		21.78	■■□□□ 1.08
RFK-204	ENST00000479197	RASA3	Q14644	834 aa		21.78	■■□□□ 1.08
RFK-204	ENST00000479197	ZSCAN25	Q6NSZ9	544 aa		21.78	■■□□□ 1.08
RFK-204	ENST00000479197	CDK5RAP2	Q96SN8	1893 aa		21.77	■■□□□ 1.08
RFK-204	ENST00000479197	TCRBV5S4A2T	A0A5A2	114 aa		21.77	■■□□□ 1.08
RFK-204	ENST00000479197	APLP1	P51693	650 aa		21.77	■■□□□ 1.08
RFK-204	ENST00000479197	PPP4C	P60510	307 aa		21.77	■■□□□ 1.08
RFK-204	ENST00000479197	FAM83A	Q86UY5	434 aa		21.77	■■□□□ 1.08
RFK-204	ENST00000479197	RFX7	Q2KHR2	1363 aa		21.77	■■□□□ 1.08
RFK-204	ENST00000479197	AK9	Q5TCS8	1911 aa		21.77	■■□□□ 1.08
RFK-204	ENST00000479197	FOCAD	Q5VW36	1801 aa		21.76	■■□□□ 1.07
RFK-204	ENST00000479197	CELF2	O95319	508 aa	Known RBP	21.76	■■□□□ 1.07
RFK-204	ENST00000479197	PLCG2	P16885	1265 aa		21.76	■■□□□ 1.07
RFK-204	ENST00000479197	NFIA	Q12857	509 aa		21.76	■■□□□ 1.07
RFK-204	ENST00000479197	PRAMEF18	Q5VWM3	479 aa		21.76	■■□□□ 1.07
RFK-204	ENST00000479197	MIGA1	Q8NAN2	632 aa		21.76	■■□□□ 1.07
RFK-204	ENST00000479197	EVI5L	Q96CN4	794 aa		21.76	■■□□□ 1.07
RFK-204	ENST00000479197	IDI2	Q9BXS1	227 aa		21.76	■■□□□ 1.07
RFK-204	ENST00000479197	ZNF408	Q9H9D4	720 aa		21.76	■■□□□ 1.07
RFK-204	ENST00000479197	CNTNAP1	P78357	1384 aa		21.76	■■□□□ 1.07
RFK-204	ENST00000479197	HSPA6	P17066	643 aa		21.75	■■□□□ 1.07
RFK-204	ENST00000479197	UBE3C	Q15386	1083 aa		21.75	■■□□□ 1.07
RFK-204	ENST00000479197	CERS3	Q8IU89	383 aa		21.75	■■□□□ 1.07
RFK-204	ENST00000479197	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	21.75	■■□□□ 1.07
RFK-204	ENST00000479197	FSD1	Q9BTV5	496 aa		21.75	■■□□□ 1.07
RFK-204	ENST00000479197	WDHD1	O75717	1129 aa	Predicted RBP	21.75	■■□□□ 1.07
RFK-204	ENST00000479197	LRRFIP1	Q32MZ4	808 aa	Known RBP	21.75	■■□□□ 1.07
RFK-204	ENST00000479197	CST9	Q5W186	159 aa		21.75	■■□□□ 1.07
RFK-204	ENST00000479197	TEX11	Q8IYF3	940 aa		21.75	■■□□□ 1.07
RFK-204	ENST00000479197	TMEM39B	Q9GZU3	492 aa		21.75	■■□□□ 1.07
RFK-204	ENST00000479197	FAM198A	Q9UFP1	575 aa		21.75	■■□□□ 1.07
RFK-204	ENST00000479197	MAGEB6P1	A0A0J9YX57	407 aa		21.74	■■□□□ 1.07
RFK-204	ENST00000479197	TMEM88B	A6NKF7	163 aa		21.74	■■□□□ 1.07
RFK-204	ENST00000479197	CHGB	P05060	677 aa		21.74	■■□□□ 1.07
RFK-204	ENST00000479197	RGS3	P49796	1198 aa		21.74	■■□□□ 1.07
RFK-204	ENST00000479197	DYNLL1	P63167	89 aa	Known RBP	21.74	■■□□□ 1.07
RFK-204	ENST00000479197	TCP10	Q12799	353 aa		21.74	■■□□□ 1.07
RFK-204	ENST00000479197	SLFNL1	Q499Z3	407 aa		21.74	■■□□□ 1.07
RFK-204	ENST00000479197	RPAP1	Q9BWH6	1393 aa	Predicted RBP	21.73	■■□□□ 1.07
RFK-204	ENST00000479197	TRIM6-TRIM34	B2RNG4	842 aa		21.73	■■□□□ 1.07
RFK-204	ENST00000479197	ZFY	P08048	801 aa	Predicted RBP	21.73	■■□□□ 1.07
RFK-204	ENST00000479197	NF2	P35240	595 aa		21.73	■■□□□ 1.07
RFK-204	ENST00000479197	FAM151A	Q8WW52	585 aa		21.73	■■□□□ 1.07
RFK-204	ENST00000479197	TEPSIN	Q96N21	525 aa		21.73	■■□□□ 1.07
RFK-204	ENST00000479197	RIOK1	Q9BRS2	568 aa	Known RBP	21.73	■■□□□ 1.07
RFK-204	ENST00000479197	RNF113A	O15541	343 aa	Known RBP	21.72	■■□□□ 1.07
RFK-204	ENST00000479197	ENTPD3	O75355	529 aa		21.72	■■□□□ 1.07
RFK-204	ENST00000479197	PICALM	Q13492	652 aa		21.72	■■□□□ 1.07
RFK-204	ENST00000479197	DDX4	Q9NQI0	724 aa	Known RBP	21.72	■■□□□ 1.07
RFK-204	ENST00000479197	PAPPA2	Q9BXP8	1791 aa		21.72	■■□□□ 1.07
RFK-204	ENST00000479197	NPM3	O75607	178 aa	Known RBP	21.71	■■□□□ 1.07
RFK-204	ENST00000479197	SUPT20HL1	Q3ZLR7	823 aa		21.71	■■□□□ 1.07
RFK-204	ENST00000479197	TTC22	Q5TAA0	569 aa		21.71	■■□□□ 1.07
RFK-204	ENST00000479197	RILPL2	Q969X0	211 aa		21.71	■■□□□ 1.07
RFK-204	ENST00000479197	CREBZF	Q9NS37	354 aa		21.71	■■□□□ 1.07
RFK-204	ENST00000479197	SSC5D	A1L4H1	1573 aa		21.71	■■□□□ 1.07
RFK-204	ENST00000479197	NBPF12	Q5TAG4	269 aa	Predicted RBP	21.7	■■□□□ 1.07
RFK-204	ENST00000479197	CDAN1	Q8IWY9	1227 aa		21.7	■■□□□ 1.07
RFK-204	ENST00000479197	APPBP2	Q92624	585 aa		21.7	■■□□□ 1.07
RFK-204	ENST00000479197	GBA2	Q9HCG7	927 aa	Predicted RBP	21.7	■■□□□ 1.07
RFK-204	ENST00000479197	TICAM2	Q86XR7	235 aa		21.7	■■□□□ 1.06
RFK-204	ENST00000479197	ZFPM1	Q8IX07	1006 aa		21.7	■■□□□ 1.06
RFK-204	ENST00000479197	TGFBRAP1	Q8WUH2	860 aa		21.7	■■□□□ 1.06
RFK-204	ENST00000479197	MBD4	O95243	580 aa		21.69	■■□□□ 1.06
RFK-204	ENST00000479197	GSPT1	P15170	499 aa	Known RBP	21.69	■■□□□ 1.06
RFK-204	ENST00000479197	LCORL	Q8N3X6	602 aa		21.69	■■□□□ 1.06

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms