RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SORBS3O60504 671 aa11.2□□□□□ -0.62
SMC5-203ENST00000475540 AOC2O75106 756 aa11.2□□□□□ -0.62
SMC5-203ENST00000475540 SLFN14P0C7P3 912 aa11.2□□□□□ -0.62
SMC5-203ENST00000475540 LIG1P18858 919 aa11.2□□□□□ -0.62
SMC5-203ENST00000475540 USP11P51784 963 aa11.2□□□□□ -0.62
SMC5-203ENST00000475540 BCL11AQ9H165 835 aa11.2□□□□□ -0.62
SMC5-203ENST00000475540 KCNF1Q9H3M0 494 aa11.2□□□□□ -0.62
SMC5-203ENST00000475540 CCDC86Q9H6F5 360 aaKnown RBP11.2□□□□□ -0.62
SMC5-203ENST00000475540 SV2BQ7L1I2 683 aa11.19□□□□□ -0.62
SMC5-203ENST00000475540 PDZD3Q86UT5 571 aa11.19□□□□□ -0.62
SMC5-203ENST00000475540 FAM20CQ8IXL6 584 aa11.19□□□□□ -0.62
SMC5-203ENST00000475540 STK35Q8TDR2 534 aa11.19□□□□□ -0.62
SMC5-203ENST00000475540 GIPC2Q8TF65 315 aa11.19□□□□□ -0.62
SMC5-203ENST00000475540 SYNGAP1Q96PV0 1343 aa11.18□□□□□ -0.62
SMC5-203ENST00000475540 ADH5P11766 374 aa11.18□□□□□ -0.62
SMC5-203ENST00000475540 BMP6P22004 513 aa11.18□□□□□ -0.62
SMC5-203ENST00000475540 CLEC10AQ8IUN9 316 aa11.18□□□□□ -0.62
SMC5-203ENST00000475540 WDR18Q9BV38 432 aa11.18□□□□□ -0.62
SMC5-203ENST00000475540 PAGE1O75459 146 aa11.17□□□□□ -0.62
SMC5-203ENST00000475540 RXRBP28702 533 aa11.17□□□□□ -0.62
SMC5-203ENST00000475540 LRRC14Q15048 493 aa11.17□□□□□ -0.62
SMC5-203ENST00000475540 PRSS36Q5K4E3 855 aa11.17□□□□□ -0.62
SMC5-203ENST00000475540 MAP1SQ66K74 1059 aaPredicted RBP11.17□□□□□ -0.62
SMC5-203ENST00000475540 DYMQ7RTS9 669 aa11.17□□□□□ -0.62
SMC5-203ENST00000475540 C2CD4AQ8NCU7 369 aaPredicted RBP11.17□□□□□ -0.62
SMC5-203ENST00000475540 ZNF862O60290 1169 aa11.16□□□□□ -0.62
SMC5-203ENST00000475540 CCDC85BQ15834 202 aaPredicted RBP11.16□□□□□ -0.62
SMC5-203ENST00000475540 BEND4Q6ZU67 534 aa11.16□□□□□ -0.62
SMC5-203ENST00000475540 SLC51AQ86UW1 340 aa11.16□□□□□ -0.62
SMC5-203ENST00000475540 WDR89Q96FK6 387 aaPredicted RBP11.16□□□□□ -0.62
SMC5-203ENST00000475540 FAM83CQ9BQN1 747 aa11.16□□□□□ -0.62
SMC5-203ENST00000475540 YIPF2Q9BWQ6 316 aa11.16□□□□□ -0.62
SMC5-203ENST00000475540 VTI1BQ9UEU0 232 aa11.16□□□□□ -0.62
SMC5-203ENST00000475540 AP4E1Q9UPM8 1137 aa11.16□□□□□ -0.62
SMC5-203ENST00000475540 CELA3AP09093 270 aa11.15□□□□□ -0.62
SMC5-203ENST00000475540 MAP4P27816 1152 aaKnown RBP11.15□□□□□ -0.62
SMC5-203ENST00000475540 ZNF252P-AS1Q0IIN9 211 aa11.15□□□□□ -0.62
SMC5-203ENST00000475540 TAF1CQ15572 869 aaPredicted RBP11.15□□□□□ -0.62
SMC5-203ENST00000475540 SGO2Q562F6 1265 aa11.15□□□□□ -0.62
SMC5-203ENST00000475540 CYP8B1Q9UNU6 501 aa11.15□□□□□ -0.62
SMC5-203ENST00000475540 ASPAP45381 313 aa11.14□□□□□ -0.63
SMC5-203ENST00000475540 KIF4BQ2VIQ3 1234 aa11.14□□□□□ -0.63
SMC5-203ENST00000475540 TRIM42Q8IWZ5 723 aa11.14□□□□□ -0.63
SMC5-203ENST00000475540 GRIN3AQ8TCU5 1115 aa11.14□□□□□ -0.63
SMC5-203ENST00000475540 ACSBG1Q96GR2 724 aa11.14□□□□□ -0.63
SMC5-203ENST00000475540 C7orf69Q9H7B7 122 aa11.14□□□□□ -0.63
SMC5-203ENST00000475540 GSC2O15499 205 aa11.13□□□□□ -0.63
SMC5-203ENST00000475540 FSTP19883 344 aa11.13□□□□□ -0.63
SMC5-203ENST00000475540 MEI1Q5TIA1 1274 aa11.13□□□□□ -0.63
SMC5-203ENST00000475540 PCNX4Q63HM2 1172 aa11.13□□□□□ -0.63
SMC5-203ENST00000475540 CDPF1Q6NVV7 123 aa11.13□□□□□ -0.63
SMC5-203ENST00000475540 LLGL2Q6P1M3 1020 aa11.13□□□□□ -0.63
SMC5-203ENST00000475540 FBLIM1Q8WUP2 373 aa11.13□□□□□ -0.63
SMC5-203ENST00000475540 PPP1R9AQ9ULJ8 1098 aa11.13□□□□□ -0.63
SMC5-203ENST00000475540 ACTL7BQ9Y614 415 aa11.13□□□□□ -0.63
SMC5-203ENST00000475540 HMX2A2RU54 273 aa11.12□□□□□ -0.63
SMC5-203ENST00000475540 CTSHP09668 335 aa11.12□□□□□ -0.63
SMC5-203ENST00000475540 ID3Q02535 119 aa11.12□□□□□ -0.63
SMC5-203ENST00000475540 GPBAR1Q8TDU6 330 aa11.12□□□□□ -0.63
SMC5-203ENST00000475540 CRELD1Q96HD1 420 aa11.12□□□□□ -0.63
SMC5-203ENST00000475540 USP31Q70CQ4 1352 aa11.12□□□□□ -0.63
SMC5-203ENST00000475540 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.11□□□□□ -0.63
SMC5-203ENST00000475540 FAM95CA0A1B0GW59 222 aa11.11□□□□□ -0.63
SMC5-203ENST00000475540 TRIM37O94972 964 aa11.11□□□□□ -0.63
SMC5-203ENST00000475540 ITGB7P26010 798 aa11.11□□□□□ -0.63
SMC5-203ENST00000475540 ST13P50502 369 aaKnown RBP11.11□□□□□ -0.63
SMC5-203ENST00000475540 NFKBIBQ15653 356 aa11.11□□□□□ -0.63
SMC5-203ENST00000475540 SCARA3Q6AZY7 606 aa11.11□□□□□ -0.63
SMC5-203ENST00000475540 TTBK2Q6IQ55 1244 aa11.11□□□□□ -0.63
SMC5-203ENST00000475540 CRIM1Q9NZV1 1036 aa11.11□□□□□ -0.63
SMC5-203ENST00000475540 TMPRSS2O15393 492 aa11.1□□□□□ -0.63
SMC5-203ENST00000475540 IGLV1-40P01703 118 aa11.1□□□□□ -0.63
SMC5-203ENST00000475540 LMNB1P20700 586 aa11.1□□□□□ -0.63
SMC5-203ENST00000475540 RNF43Q68DV7 783 aa11.1□□□□□ -0.63
SMC5-203ENST00000475540 PAOXQ6QHF9 649 aa11.1□□□□□ -0.63
SMC5-203ENST00000475540 ATXN3LQ9H3M9 355 aa11.1□□□□□ -0.63
SMC5-203ENST00000475540 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
SMC5-203ENST00000475540 FAM105AQ9NUU6 356 aa11.1□□□□□ -0.63
SMC5-203ENST00000475540 RLBP1P12271 317 aa11.09□□□□□ -0.63
SMC5-203ENST00000475540 ZNF16P17020 682 aaPredicted RBP11.09□□□□□ -0.63
SMC5-203ENST00000475540 NFIAQ12857 509 aa11.09□□□□□ -0.63
SMC5-203ENST00000475540 MPRIPQ6WCQ1 1025 aa11.09□□□□□ -0.63
SMC5-203ENST00000475540 EZH1Q92800 747 aaPredicted RBP11.09□□□□□ -0.63
SMC5-203ENST00000475540 CACNA2D2Q9NY47 1150 aa11.09□□□□□ -0.63
SMC5-203ENST00000475540 RAB6AP20340 208 aa11.08□□□□□ -0.64
SMC5-203ENST00000475540 MAP7Q14244 749 aa11.08□□□□□ -0.64
SMC5-203ENST00000475540 RASIP1Q5U651 963 aa11.08□□□□□ -0.64
SMC5-203ENST00000475540 FANCD2OSQ96PS1 177 aa11.08□□□□□ -0.64
SMC5-203ENST00000475540 NOC4LQ9BVI4 516 aaKnown RBP11.08□□□□□ -0.64
SMC5-203ENST00000475540 PIDD1Q9HB75 910 aa11.08□□□□□ -0.64
SMC5-203ENST00000475540 PCDHGC5Q9Y5F6 944 aa11.08□□□□□ -0.64
SMC5-203ENST00000475540 NFICP08651 508 aa11.07□□□□□ -0.64
SMC5-203ENST00000475540 RPS26P62854 115 aaKnown RBP11.07□□□□□ -0.64
SMC5-203ENST00000475540 MAP3K11Q16584 847 aa11.07□□□□□ -0.64
SMC5-203ENST00000475540 ZC3H12AQ5D1E8 599 aaKnown RBP11.07□□□□□ -0.64
SMC5-203ENST00000475540 DBNDD2Q9BQY9 259 aa11.06□□□□□ -0.64
SMC5-203ENST00000475540 ACSS3Q9H6R3 686 aa11.06□□□□□ -0.64
SMC5-203ENST00000475540 DISC1Q9NRI5 854 aa11.06□□□□□ -0.64
SMC5-203ENST00000475540 PCDHA4Q9UN74 947 aa11.06□□□□□ -0.64
SMC5-203ENST00000475540 LIG3P49916 1009 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms