RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SOX4Q06945 474 aaPredicted RBP6.86□□□□□ -1.31
BRCA2-202ENST00000470094 CCDC85BQ15834 202 aaPredicted RBP6.86□□□□□ -1.31
BRCA2-202ENST00000470094 PRR23CQ6ZRP0 262 aa6.86□□□□□ -1.31
BRCA2-202ENST00000470094 PDZD3Q86UT5 571 aa6.86□□□□□ -1.31
BRCA2-202ENST00000470094 ARMC10Q8N2F6 343 aa6.86□□□□□ -1.31
BRCA2-202ENST00000470094 STK35Q8TDR2 534 aa6.86□□□□□ -1.31
BRCA2-202ENST00000470094 CRELD1Q96HD1 420 aa6.86□□□□□ -1.31
BRCA2-202ENST00000470094 SEMA6BQ9H3T3 888 aa6.86□□□□□ -1.31
BRCA2-202ENST00000470094 KRT82Q9NSB4 513 aa6.86□□□□□ -1.31
BRCA2-202ENST00000470094 AP4E1Q9UPM8 1137 aa6.86□□□□□ -1.31
BRCA2-202ENST00000470094 HIF3AQ9Y2N7 669 aa6.86□□□□□ -1.31
BRCA2-202ENST00000470094 BMP3P12645 472 aa6.85□□□□□ -1.31
BRCA2-202ENST00000470094 LIG1P18858 919 aa6.85□□□□□ -1.31
BRCA2-202ENST00000470094 LRRC14Q15048 493 aa6.85□□□□□ -1.31
BRCA2-202ENST00000470094 MEI1Q5TIA1 1274 aa6.85□□□□□ -1.31
BRCA2-202ENST00000470094 PCNX4Q63HM2 1172 aa6.85□□□□□ -1.31
BRCA2-202ENST00000470094 MAP1SQ66K74 1059 aaPredicted RBP6.85□□□□□ -1.31
BRCA2-202ENST00000470094 FAM20CQ8IXL6 584 aa6.85□□□□□ -1.31
BRCA2-202ENST00000470094 WDR18Q9BV38 432 aa6.85□□□□□ -1.31
BRCA2-202ENST00000470094 RAXQ9Y2V3 346 aa6.85□□□□□ -1.31
BRCA2-202ENST00000470094 ADAM23O75077 832 aa6.84□□□□□ -1.31
BRCA2-202ENST00000470094 SLFN14P0C7P3 912 aa6.84□□□□□ -1.31
BRCA2-202ENST00000470094 ZNF16P17020 682 aaPredicted RBP6.84□□□□□ -1.31
BRCA2-202ENST00000470094 BMP6P22004 513 aa6.84□□□□□ -1.31
BRCA2-202ENST00000470094 USP11P51784 963 aa6.84□□□□□ -1.31
BRCA2-202ENST00000470094 TAF1CQ15572 869 aaPredicted RBP6.84□□□□□ -1.31
BRCA2-202ENST00000470094 C2CD4AQ8NCU7 369 aaPredicted RBP6.84□□□□□ -1.31
BRCA2-202ENST00000470094 ACSBG1Q96GR2 724 aa6.84□□□□□ -1.31
BRCA2-202ENST00000470094 YIPF2Q9BWQ6 316 aa6.84□□□□□ -1.31
BRCA2-202ENST00000470094 KCNF1Q9H3M0 494 aa6.84□□□□□ -1.31
BRCA2-202ENST00000470094 SYNGAP1Q96PV0 1343 aa6.83□□□□□ -1.32
BRCA2-202ENST00000470094 CTSHP09668 335 aa6.83□□□□□ -1.32
BRCA2-202ENST00000470094 RXRBP28702 533 aa6.83□□□□□ -1.32
BRCA2-202ENST00000470094 ST13P50502 369 aaKnown RBP6.83□□□□□ -1.32
BRCA2-202ENST00000470094 ZNF252P-AS1Q0IIN9 211 aa6.83□□□□□ -1.32
BRCA2-202ENST00000470094 LLGL2Q6P1M3 1020 aa6.83□□□□□ -1.32
BRCA2-202ENST00000470094 DYMQ7RTS9 669 aa6.83□□□□□ -1.32
BRCA2-202ENST00000470094 WDR89Q96FK6 387 aaPredicted RBP6.83□□□□□ -1.32
BRCA2-202ENST00000470094 STOML1Q9UBI4 398 aa6.83□□□□□ -1.32
BRCA2-202ENST00000470094 CYP8B1Q9UNU6 501 aa6.83□□□□□ -1.32
BRCA2-202ENST00000470094 CCDC9Q9Y3X0 531 aaKnown RBP6.83□□□□□ -1.32
BRCA2-202ENST00000470094 ZNF862O60290 1169 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 TRIM37O94972 964 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 MAP4P27816 1152 aaKnown RBP6.82□□□□□ -1.32
BRCA2-202ENST00000470094 ID3Q02535 119 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 KIF4BQ2VIQ3 1234 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 SGO2Q562F6 1265 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 TTBK2Q6IQ55 1244 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 BEND4Q6ZU67 534 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 CLEC10AQ8IUN9 316 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 GRIN3AQ8TCU5 1115 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 GPBAR1Q8TDU6 330 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 ACTL7BQ9Y614 415 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 USP31Q70CQ4 1352 aa6.82□□□□□ -1.32
BRCA2-202ENST00000470094 TMPRSS2O15393 492 aa6.81□□□□□ -1.32
BRCA2-202ENST00000470094 RLBP1P12271 317 aa6.81□□□□□ -1.32
BRCA2-202ENST00000470094 RAB6AP20340 208 aa6.81□□□□□ -1.32
BRCA2-202ENST00000470094 LMNB1P20700 586 aa6.81□□□□□ -1.32
BRCA2-202ENST00000470094 ASPAP45381 313 aa6.81□□□□□ -1.32
BRCA2-202ENST00000470094 PRSS36Q5K4E3 855 aa6.81□□□□□ -1.32
BRCA2-202ENST00000470094 SCARA3Q6AZY7 606 aa6.81□□□□□ -1.32
BRCA2-202ENST00000470094 NOC4LQ9BVI4 516 aaKnown RBP6.81□□□□□ -1.32
BRCA2-202ENST00000470094 C7orf69Q9H7B7 122 aa6.81□□□□□ -1.32
BRCA2-202ENST00000470094 RBM47A0AV96 593 aaKnown RBP6.8□□□□□ -1.32
BRCA2-202ENST00000470094 GSC2O15499 205 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 FSTP19883 344 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 LIG3P49916 1009 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 RPS26P62854 115 aaKnown RBP6.8□□□□□ -1.32
BRCA2-202ENST00000470094 MAP3K11Q16584 847 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 RASIP1Q5U651 963 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 CDPF1Q6NVV7 123 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 TRIM42Q8IWZ5 723 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 FBLIM1Q8WUP2 373 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 FAM83CQ9BQN1 747 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 ATXN3LQ9H3M9 355 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 FAM105AQ9NUU6 356 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 CRIM1Q9NZV1 1036 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 PPP1R9AQ9ULJ8 1098 aa6.8□□□□□ -1.32
BRCA2-202ENST00000470094 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.79□□□□□ -1.32
BRCA2-202ENST00000470094 FAM95CA0A1B0GW59 222 aa6.79□□□□□ -1.32
BRCA2-202ENST00000470094 HMX2A2RU54 273 aa6.79□□□□□ -1.32
BRCA2-202ENST00000470094 MRPL58Q14197 206 aaKnown RBP6.79□□□□□ -1.32
BRCA2-202ENST00000470094 PAOXQ6QHF9 649 aa6.79□□□□□ -1.32
BRCA2-202ENST00000470094 MPRIPQ6WCQ1 1025 aa6.79□□□□□ -1.32
BRCA2-202ENST00000470094 GSX1Q9H4S2 264 aaPredicted RBP6.79□□□□□ -1.32
BRCA2-202ENST00000470094 PIDD1Q9HB75 910 aa6.79□□□□□ -1.32
BRCA2-202ENST00000470094 CACNA2D2Q9NY47 1150 aa6.79□□□□□ -1.32
BRCA2-202ENST00000470094 PCDHA4Q9UN74 947 aa6.79□□□□□ -1.32
BRCA2-202ENST00000470094 PCDHGC5Q9Y5F6 944 aa6.79□□□□□ -1.32
BRCA2-202ENST00000470094 MAP7Q14244 749 aa6.78□□□□□ -1.32
BRCA2-202ENST00000470094 NFKBIBQ15653 356 aa6.78□□□□□ -1.32
BRCA2-202ENST00000470094 SLC51AQ86UW1 340 aa6.78□□□□□ -1.32
BRCA2-202ENST00000470094 FANCD2OSQ96PS1 177 aa6.78□□□□□ -1.32
BRCA2-202ENST00000470094 IGLV1-40P01703 118 aa6.77□□□□□ -1.33
BRCA2-202ENST00000470094 NFIAQ12857 509 aa6.77□□□□□ -1.33
BRCA2-202ENST00000470094 ZC3H12AQ5D1E8 599 aaKnown RBP6.77□□□□□ -1.33
BRCA2-202ENST00000470094 RNF43Q68DV7 783 aa6.77□□□□□ -1.33
BRCA2-202ENST00000470094 AGMOQ6ZNB7 445 aa6.77□□□□□ -1.33
BRCA2-202ENST00000470094 RGS22Q8NE09 1264 aa6.77□□□□□ -1.33
BRCA2-202ENST00000470094 EZH1Q92800 747 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms