RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 RAXQ9Y2V3 346 aa6.67□□□□□ -1.34
VPS50-209ENST00000467326 FBXO24O75426 580 aa6.66□□□□□ -1.34
VPS50-209ENST00000467326 EIF4BP23588 611 aaKnown RBP6.66□□□□□ -1.34
VPS50-209ENST00000467326 HNRNPUQ00839 825 aaKnown RBP eCLIP6.66□□□□□ -1.34
VPS50-209ENST00000467326 FBXO33Q7Z6M2 555 aa6.66□□□□□ -1.34
VPS50-209ENST00000467326 FAM20CQ8IXL6 584 aa6.66□□□□□ -1.34
VPS50-209ENST00000467326 CEP44Q9C0F1 390 aa6.66□□□□□ -1.34
VPS50-209ENST00000467326 AP4E1Q9UPM8 1137 aa6.66□□□□□ -1.34
VPS50-209ENST00000467326 GSTP1P09211 210 aaKnown RBP6.65□□□□□ -1.34
VPS50-209ENST00000467326 BMP3P12645 472 aa6.65□□□□□ -1.34
VPS50-209ENST00000467326 TMCO4Q5TGY1 634 aa6.65□□□□□ -1.34
VPS50-209ENST00000467326 NECAB3Q96P71 396 aaPredicted RBP6.65□□□□□ -1.34
VPS50-209ENST00000467326 KCNF1Q9H3M0 494 aa6.65□□□□□ -1.34
VPS50-209ENST00000467326 TTF2Q9UNY4 1162 aaKnown RBP6.65□□□□□ -1.34
VPS50-209ENST00000467326 ENC1O14682 589 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 DRD2P14416 443 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 FSTP19883 344 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 NME2P22392 152 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 SOX4Q06945 474 aaPredicted RBP6.64□□□□□ -1.35
VPS50-209ENST00000467326 PSMD2Q13200 908 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 SGO2Q562F6 1265 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 AKAP4Q5JQC9 854 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 C2CD4AQ8NCU7 369 aaPredicted RBP6.64□□□□□ -1.35
VPS50-209ENST00000467326 ANKRD24Q8TF21 1146 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 WDR18Q9BV38 432 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 ZC3H12CQ9C0D7 883 aaKnown RBP6.64□□□□□ -1.35
VPS50-209ENST00000467326 CCDC86Q9H6F5 360 aaKnown RBP6.64□□□□□ -1.35
VPS50-209ENST00000467326 C7orf69Q9H7B7 122 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 RAD18Q9NS91 495 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 KRT82Q9NSB4 513 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 RNF19AQ9NV58 838 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 STOML1Q9UBI4 398 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 PARP2Q9UGN5 583 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 RNF114Q9Y508 228 aa6.64□□□□□ -1.35
VPS50-209ENST00000467326 AOC2O75106 756 aa6.63□□□□□ -1.35
VPS50-209ENST00000467326 SSTR4P31391 388 aa6.63□□□□□ -1.35
VPS50-209ENST00000467326 FZD5Q13467 585 aa6.63□□□□□ -1.35
VPS50-209ENST00000467326 BEND4Q6ZU67 534 aa6.63□□□□□ -1.35
VPS50-209ENST00000467326 PDZD3Q86UT5 571 aa6.63□□□□□ -1.35
VPS50-209ENST00000467326 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
VPS50-209ENST00000467326 SAMM50Q9Y512 469 aa6.63□□□□□ -1.35
VPS50-209ENST00000467326 ACTL7BQ9Y614 415 aa6.63□□□□□ -1.35
VPS50-209ENST00000467326 AK5Q9Y6K8 562 aa6.63□□□□□ -1.35
VPS50-209ENST00000467326 HMX2A2RU54 273 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 PAGE1O75459 146 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 CELA3AP09093 270 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 MAP4P27816 1152 aaKnown RBP6.62□□□□□ -1.35
VPS50-209ENST00000467326 RXRBP28702 533 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 CD97P48960 835 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 USP11P51784 963 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 XPCQ01831 940 aaPredicted RBP6.62□□□□□ -1.35
VPS50-209ENST00000467326 CLEC10AQ8IUN9 316 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 TRIM42Q8IWZ5 723 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 STK35Q8TDR2 534 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 KCNB2Q92953 911 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 YIPF2Q9BWQ6 316 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 EMILIN2Q9BXX0 1053 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 CBX8Q9HC52 389 aa6.62□□□□□ -1.35
VPS50-209ENST00000467326 SYNGAP1Q96PV0 1343 aa6.61□□□□□ -1.35
VPS50-209ENST00000467326 TAL1P17542 331 aaPredicted RBP6.61□□□□□ -1.35
VPS50-209ENST00000467326 LIG1P18858 919 aa6.61□□□□□ -1.35
VPS50-209ENST00000467326 RAB6AP20340 208 aa6.61□□□□□ -1.35
VPS50-209ENST00000467326 ARNTP27540 789 aa6.61□□□□□ -1.35
VPS50-209ENST00000467326 DAB2P98082 770 aa6.61□□□□□ -1.35
VPS50-209ENST00000467326 MAP1SQ66K74 1059 aaPredicted RBP6.61□□□□□ -1.35
VPS50-209ENST00000467326 DYMQ7RTS9 669 aa6.61□□□□□ -1.35
VPS50-209ENST00000467326 TMC4Q7Z404 712 aa6.61□□□□□ -1.35
VPS50-209ENST00000467326 WDR89Q96FK6 387 aaPredicted RBP6.61□□□□□ -1.35
VPS50-209ENST00000467326 FAM161BQ96MY7 647 aa6.61□□□□□ -1.35
VPS50-209ENST00000467326 FAM83CQ9BQN1 747 aa6.61□□□□□ -1.35
VPS50-209ENST00000467326 TMPRSS2O15393 492 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 ZNF862O60290 1169 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 IGLV1-40P01703 118 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 GRIK1P39086 918 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 ZNF252P-AS1Q0IIN9 211 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 NFIAQ12857 509 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 KIF4BQ2VIQ3 1234 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 PCNX4Q63HM2 1172 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 CDPF1Q6NVV7 123 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 FBLIM1Q8WUP2 373 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 ACSBG1Q96GR2 724 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 DBNDD2Q9BQY9 259 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 BCL2L13Q9BXK5 485 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 MRS2Q9HD23 443 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 FAM105AQ9NUU6 356 aa6.6□□□□□ -1.35
VPS50-209ENST00000467326 FAM95CA0A1B0GW59 222 aa6.59□□□□□ -1.35
VPS50-209ENST00000467326 GP2P55259 537 aaKnown RBP6.59□□□□□ -1.35
VPS50-209ENST00000467326 TAGLNQ01995 201 aaKnown RBP6.59□□□□□ -1.35
VPS50-209ENST00000467326 ID3Q02535 119 aa6.59□□□□□ -1.35
VPS50-209ENST00000467326 CCDC85BQ15834 202 aaPredicted RBP6.59□□□□□ -1.35
VPS50-209ENST00000467326 RNF43Q68DV7 783 aa6.59□□□□□ -1.35
VPS50-209ENST00000467326 LLGL2Q6P1M3 1020 aa6.59□□□□□ -1.35
VPS50-209ENST00000467326 INTS5Q6P9B9 1019 aaKnown RBP6.59□□□□□ -1.35
VPS50-209ENST00000467326 SV2BQ7L1I2 683 aa6.59□□□□□ -1.35
VPS50-209ENST00000467326 CRELD1Q96HD1 420 aa6.59□□□□□ -1.35
VPS50-209ENST00000467326 PPP1R9AQ9ULJ8 1098 aa6.59□□□□□ -1.35
VPS50-209ENST00000467326 PCDHGC5Q9Y5F6 944 aa6.59□□□□□ -1.35
VPS50-209ENST00000467326 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.58□□□□□ -1.36
VPS50-209ENST00000467326 SLFN14P0C7P3 912 aa6.58□□□□□ -1.36
VPS50-209ENST00000467326 ITGAEP38570 1179 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms