RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 FGAP02671 866 aa14.44□□□□□ -0.1
VPS16-206ENST00000466415 USP5P45974 858 aa14.44□□□□□ -0.1
VPS16-206ENST00000466415 SCNN1DP51172 638 aa14.44□□□□□ -0.1
VPS16-206ENST00000466415 CIAPIN1Q6FI81 312 aa14.44□□□□□ -0.1
VPS16-206ENST00000466415 RSBN1LQ6PCB5 846 aaPredicted RBP14.44□□□□□ -0.1
VPS16-206ENST00000466415 RASEFQ8IZ41 740 aa14.44□□□□□ -0.1
VPS16-206ENST00000466415 IFNL3Q8IZI9 196 aa14.44□□□□□ -0.1
VPS16-206ENST00000466415 KCNB2Q92953 911 aa14.44□□□□□ -0.1
VPS16-206ENST00000466415 HDAC9Q9UKV0 1011 aa14.44□□□□□ -0.1
VPS16-206ENST00000466415 SCN9AQ15858 1988 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 GSG1L2A8MUP6 293 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 FOXP2O15409 715 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 CYP21A2P08686 494 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 CASTP20810 708 aaKnown RBP14.43□□□□□ -0.1
VPS16-206ENST00000466415 CRKP46108 304 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 RBM5P52756 815 aaKnown RBP eCLIP14.43□□□□□ -0.1
VPS16-206ENST00000466415 EIF6P56537 245 aaKnown RBP14.43□□□□□ -0.1
VPS16-206ENST00000466415 PPP4CP60510 307 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 HAND2P61296 217 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 TNIP1Q15025 636 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 ALX1Q15699 326 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 AMOTL1Q8IY63 956 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 TEX11Q8IYF3 940 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 SDR42E1Q8WUS8 393 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 IL17RAQ96F46 866 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 FAM163AQ96GL9 167 aaPredicted RBP14.43□□□□□ -0.1
VPS16-206ENST00000466415 EPB41L4AQ9HCS5 686 aaPredicted RBP14.43□□□□□ -0.1
VPS16-206ENST00000466415 DAGLAQ9Y4D2 1042 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 PSME4Q14997 1843 aa14.43□□□□□ -0.1
VPS16-206ENST00000466415 GPR75-ASB3A0A0A6YYF3 556 aa14.42□□□□□ -0.1
VPS16-206ENST00000466415 NEK4P51957 841 aa14.42□□□□□ -0.1
VPS16-206ENST00000466415 HDLBPQ00341 1268 aaKnown RBP14.42□□□□□ -0.1
VPS16-206ENST00000466415 GIMAP6Q6P9H5 292 aa14.42□□□□□ -0.1
VPS16-206ENST00000466415 BLOC1S2Q6QNY1 142 aa14.42□□□□□ -0.1
VPS16-206ENST00000466415 HHIPL2Q6UWX4 724 aa14.42□□□□□ -0.1
VPS16-206ENST00000466415 IL27Q8NEV9 243 aa14.42□□□□□ -0.1
VPS16-206ENST00000466415 SH3RF3Q8TEJ3 882 aaPredicted RBP14.42□□□□□ -0.1
VPS16-206ENST00000466415 IPO9Q96P70 1041 aaKnown RBP14.42□□□□□ -0.1
VPS16-206ENST00000466415 ATP8A2Q9NTI2 1148 aa14.42□□□□□ -0.1
VPS16-206ENST00000466415 CYP46A1Q9Y6A2 500 aa14.42□□□□□ -0.1
VPS16-206ENST00000466415 ZNF646O15015 1829 aaPredicted RBP14.42□□□□□ -0.1
VPS16-206ENST00000466415 MYH2Q9UKX2 1941 aa14.42□□□□□ -0.1
VPS16-206ENST00000466415 VIL1P09327 827 aaKnown RBP14.41□□□□□ -0.1
VPS16-206ENST00000466415 LMNB1P20700 586 aa14.41□□□□□ -0.1
VPS16-206ENST00000466415 TSGA10IPQ3SY00 556 aa14.41□□□□□ -0.1
VPS16-206ENST00000466415 OGFOD1Q8N543 542 aa14.41□□□□□ -0.1
VPS16-206ENST00000466415 AGBL3Q8NEM8 1001 aa14.41□□□□□ -0.1
VPS16-206ENST00000466415 NEK1Q96PY6 1258 aa14.41□□□□□ -0.1
VPS16-206ENST00000466415 UPF3BQ9BZI7 483 aaKnown RBP14.41□□□□□ -0.1
VPS16-206ENST00000466415 TM6SF1Q9BZW5 370 aa14.41□□□□□ -0.1
VPS16-206ENST00000466415 SERPINA10Q9UK55 444 aa14.41□□□□□ -0.1
VPS16-206ENST00000466415 LAMA4Q16363 1823 aa14.41□□□□□ -0.1
VPS16-206ENST00000466415 MINDY4BA8MYZ0 360 aa14.4□□□□□ -0.1
VPS16-206ENST00000466415 HMGB1P09429 215 aaKnown RBP14.4□□□□□ -0.1
VPS16-206ENST00000466415 CXCL9Q07325 125 aa14.4□□□□□ -0.1
VPS16-206ENST00000466415 TRDNQ13061 729 aa14.4□□□□□ -0.1
VPS16-206ENST00000466415 ADCK5Q3MIX3 580 aa14.4□□□□□ -0.1
VPS16-206ENST00000466415 RALYLQ86SE5 291 aaKnown RBP14.4□□□□□ -0.1
VPS16-206ENST00000466415 SNX21Q969T3 373 aa14.4□□□□□ -0.1
VPS16-206ENST00000466415 ARPP21Q9UBL0 812 aaPredicted RBP14.4□□□□□ -0.1
VPS16-206ENST00000466415 NAV1Q8NEY1 1877 aa14.4□□□□□ -0.1
VPS16-206ENST00000466415 TIAM2Q8IVF5 1701 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 E7EWF7 191 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 SLC3A2P08195 630 aaKnown RBP14.39□□□□□ -0.11
VPS16-206ENST00000466415 MCM2P49736 904 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 PPARAQ07869 468 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 GPR162Q16538 588 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 RUFY3Q7L099 469 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 TGFBRAP1Q8WUH2 860 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 ZDHHC15Q96MV8 337 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 MRIQ9BWK5 157 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 RNF41Q9H4P4 317 aaPredicted RBP14.39□□□□□ -0.11
VPS16-206ENST00000466415 ZSWIM6Q9HCJ5 1215 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 DCP1AQ9NPI6 582 aaPredicted RBP14.39□□□□□ -0.11
VPS16-206ENST00000466415 USP40Q9NVE5 1235 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 MCM9Q9NXL9 1143 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 ZBTB12Q9Y330 459 aaPredicted RBP14.39□□□□□ -0.11
VPS16-206ENST00000466415 TAF6LQ9Y6J9 622 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 ADAMTSL1Q8N6G6 1762 aa14.39□□□□□ -0.11
VPS16-206ENST00000466415 USP17L8P0C7I0 530 aa14.38□□□□□ -0.11
VPS16-206ENST00000466415 YBX3P16989 372 aaKnown RBP eCLIP14.38□□□□□ -0.11
VPS16-206ENST00000466415 RPS6KB1P23443 525 aa14.38□□□□□ -0.11
VPS16-206ENST00000466415 RPS12P25398 132 aaKnown RBP14.38□□□□□ -0.11
VPS16-206ENST00000466415 RHBDL3P58872 404 aa14.38□□□□□ -0.11
VPS16-206ENST00000466415 CFAP100Q494V2 611 aa14.38□□□□□ -0.11
VPS16-206ENST00000466415 MAPKAPK5Q8IW41 473 aa14.38□□□□□ -0.11
VPS16-206ENST00000466415 NCOA7Q8NI08 942 aa14.38□□□□□ -0.11
VPS16-206ENST00000466415 TBC1D2Q9BYX2 928 aa14.38□□□□□ -0.11
VPS16-206ENST00000466415 PDRG1Q9NUG6 133 aa14.38□□□□□ -0.11
VPS16-206ENST00000466415 TMOD2Q9NZR1 351 aa14.38□□□□□ -0.11
VPS16-206ENST00000466415 GJA3Q9Y6H8 435 aa14.38□□□□□ -0.11
VPS16-206ENST00000466415 FLT1P17948 1338 aa14.38□□□□□ -0.11
VPS16-206ENST00000466415 LAMB1P07942 1786 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 FZD9O00144 591 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 POLR3DP05423 398 aaPredicted RBP14.37□□□□□ -0.11
VPS16-206ENST00000466415 PRELPP51888 382 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 FGD1P98174 961 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 CTDSPL2Q05D32 466 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 PICALMQ13492 652 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 DLGAP5Q15398 846 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms