RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ZFYVE1Q9HBF4 777 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 PRKAG2Q9UGJ0 569 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 AK5Q9Y6K8 562 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 GADD45BO75293 160 aaPredicted RBP4.47□□□□□ -1.69
HPS3-203ENST00000460822 IGLV1-40P01703 118 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 ESRRAP11474 423 aaPredicted RBP4.47□□□□□ -1.69
HPS3-203ENST00000460822 RXRBP28702 533 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 ZNF394Q53GI3 561 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 C12orf50Q8NA57 414 aaPredicted RBP4.47□□□□□ -1.69
HPS3-203ENST00000460822 FAM46AQ96IP4 442 aaKnown RBP4.47□□□□□ -1.69
HPS3-203ENST00000460822 SPATA32Q96LK8 384 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 DNAJC25Q9H1X3 360 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 CLEC4MQ9H2X3 399 aaPredicted RBP4.47□□□□□ -1.69
HPS3-203ENST00000460822 PPP4R2Q9NY27 417 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 SPG7Q9UQ90 795 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 PCDHGB7Q9Y5F8 929 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 MEGF11A6BM72 1044 aa4.46□□□□□ -1.7
HPS3-203ENST00000460822 METTL12A8MUP2 240 aa4.46□□□□□ -1.7
HPS3-203ENST00000460822 DNAJA1P31689 397 aaKnown RBP4.46□□□□□ -1.7
HPS3-203ENST00000460822 PCDH1Q08174 1060 aa4.46□□□□□ -1.7
HPS3-203ENST00000460822 HGSNATQ68CP4 663 aa4.46□□□□□ -1.7
HPS3-203ENST00000460822 CLEC10AQ8IUN9 316 aa4.46□□□□□ -1.7
HPS3-203ENST00000460822 CCNJLQ8IV13 435 aa4.46□□□□□ -1.7
HPS3-203ENST00000460822 GIMAP7Q8NHV1 300 aa4.46□□□□□ -1.7
HPS3-203ENST00000460822 MYRFLQ96LU7 910 aa4.46□□□□□ -1.7
HPS3-203ENST00000460822 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.46□□□□□ -1.7
HPS3-203ENST00000460822 HIF3AQ9Y2N7 669 aa4.46□□□□□ -1.7
HPS3-203ENST00000460822 TM4SF5O14894 197 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 CYP11A1P05108 521 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 BMP3P12645 472 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 USP11P51784 963 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 FZD5Q13467 585 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 GNL2Q13823 731 aaKnown RBP4.45□□□□□ -1.7
HPS3-203ENST00000460822 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.45□□□□□ -1.7
HPS3-203ENST00000460822 EXOSC6Q5RKV6 272 aaKnown RBP4.45□□□□□ -1.7
HPS3-203ENST00000460822 KIAA0319Q5VV43 1072 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 USPL1Q5W0Q7 1092 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 PI16Q6UXB8 463 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 DPH6Q7L8W6 267 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 ARMC10Q8N2F6 343 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 DHX38Q92620 1227 aaKnown RBP4.45□□□□□ -1.7
HPS3-203ENST00000460822 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 NPHS2Q9NP85 383 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 TRAK1Q9UPV9 953 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 ATP2B1P20020 1258 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 EIF4BP23588 611 aaKnown RBP4.45□□□□□ -1.7
HPS3-203ENST00000460822 GTF2F1P35269 517 aaKnown RBP eCLIP4.45□□□□□ -1.7
HPS3-203ENST00000460822 PREPP48147 710 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 SPRED3Q2MJR0 410 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 BEND4Q6ZU67 534 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 FAM20CQ8IXL6 584 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 SLC43A3Q8NBI5 491 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 CCDC74AQ96AQ1 378 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 FRMD6Q96NE9 622 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 YIPF2Q9BWQ6 316 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 RAD18Q9NS91 495 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 PCMTD2Q9NV79 361 aa4.45□□□□□ -1.7
HPS3-203ENST00000460822 CDK11BP21127 795 aaKnown RBP4.44□□□□□ -1.7
HPS3-203ENST00000460822 GRIK1P39086 918 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 RACK1P63244 317 aaKnown RBP4.44□□□□□ -1.7
HPS3-203ENST00000460822 HNRNPUQ00839 825 aaKnown RBP eCLIP4.44□□□□□ -1.7
HPS3-203ENST00000460822 POU4F3Q15319 338 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 GIMAP6Q6P9H5 292 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.44□□□□□ -1.7
HPS3-203ENST00000460822 USP48Q86UV5 1035 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 TRIM42Q8IWZ5 723 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 SMG8Q8ND04 991 aaKnown RBP4.44□□□□□ -1.7
HPS3-203ENST00000460822 TCF12Q99081 682 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 FAM83CQ9BQN1 747 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 CORO1BQ9BR76 489 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 C7orf69Q9H7B7 122 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 NLRP2Q9NX02 1062 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 CDK11AQ9UQ88 783 aaPredicted RBP4.44□□□□□ -1.7
HPS3-203ENST00000460822 INPP5FQ9Y2H2 1132 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 LOC100289279A0A1B0GTE1 492 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 HMX2A2RU54 273 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 GRIA4P48058 902 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 NFIAQ12857 509 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 MEI1Q5TIA1 1274 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 RNF43Q68DV7 783 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 HS2ST1Q7LGA3 356 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 EPS8L3Q8TE67 593 aaKnown RBP4.44□□□□□ -1.7
HPS3-203ENST00000460822 DBNDD2Q9BQY9 259 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 OSBPL7Q9BZF2 842 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 LNPKQ9C0E8 428 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 C12orf49Q9H741 205 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 GGT7Q9UJ14 662 aa4.44□□□□□ -1.7
HPS3-203ENST00000460822 DDX41Q9UJV9 622 aaKnown RBP4.44□□□□□ -1.7
HPS3-203ENST00000460822 MAP4P27816 1152 aaKnown RBP4.43□□□□□ -1.7
HPS3-203ENST00000460822 CANXP27824 592 aaKnown RBP4.43□□□□□ -1.7
HPS3-203ENST00000460822 SSTR4P31391 388 aa4.43□□□□□ -1.7
HPS3-203ENST00000460822 GMLQ99445 158 aa4.43□□□□□ -1.7
HPS3-203ENST00000460822 TMPRSS13Q9BYE2 586 aa4.43□□□□□ -1.7
HPS3-203ENST00000460822 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
HPS3-203ENST00000460822 ATG3Q9NT62 314 aa4.43□□□□□ -1.7
HPS3-203ENST00000460822 MAOBP27338 520 aa4.42□□□□□ -1.7
HPS3-203ENST00000460822 PDE3AQ14432 1141 aa4.42□□□□□ -1.7
HPS3-203ENST00000460822 NFKBIBQ15653 356 aa4.42□□□□□ -1.7
HPS3-203ENST00000460822 ZNF423Q2M1K9 1284 aa4.42□□□□□ -1.7
HPS3-203ENST00000460822 PAOXQ6QHF9 649 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms