RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 AEBP2Q6ZN18 517 aaPredicted RBP15.95■□□□□ 0.14
HPS3-203ENST00000460822 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
HPS3-203ENST00000460822 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
HPS3-203ENST00000460822 PHF23Q9BUL5 403 aaPredicted RBP13.45□□□□□ -0.26
HPS3-203ENST00000460822 FOXD1Q16676 465 aa12.78□□□□□ -0.36
HPS3-203ENST00000460822 POTEDQ86YR6 584 aa12.37□□□□□ -0.43
HPS3-203ENST00000460822 MSH5O43196 834 aa12.12□□□□□ -0.47
HPS3-203ENST00000460822 PIAS4Q8N2W9 510 aaPredicted RBP11.83□□□□□ -0.52
HPS3-203ENST00000460822 PLPPR3Q6T4P5 718 aa11.72□□□□□ -0.53
HPS3-203ENST00000460822 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
HPS3-203ENST00000460822 ADRA2BP18089 450 aa11.61□□□□□ -0.55
HPS3-203ENST00000460822 DMRT2Q9Y5R5 561 aa10.81□□□□□ -0.68
HPS3-203ENST00000460822 MAPK8IP2Q13387 824 aaPredicted RBP10.77□□□□□ -0.69
HPS3-203ENST00000460822 SCAF1Q9H7N4 1312 aaKnown RBP10.69□□□□□ -0.7
HPS3-203ENST00000460822 CACNB1Q02641 598 aaPredicted RBP10.56□□□□□ -0.72
HPS3-203ENST00000460822 HOXD11P31277 338 aaPredicted RBP10.3□□□□□ -0.76
HPS3-203ENST00000460822 RNF39Q9H2S5 420 aa10.3□□□□□ -0.76
HPS3-203ENST00000460822 DCAF8L1A6NGE4 600 aa10.29□□□□□ -0.76
HPS3-203ENST00000460822 PPP4R3CPQ6ZMV5 832 aa10.23□□□□□ -0.77
HPS3-203ENST00000460822 C1QBPQ07021 282 aaKnown RBP10.15□□□□□ -0.78
HPS3-203ENST00000460822 CNKSR2Q8WXI2 1034 aa10.13□□□□□ -0.79
HPS3-203ENST00000460822 RNF216Q9NWF9 866 aaPredicted RBP10.13□□□□□ -0.79
HPS3-203ENST00000460822 DNAJC5BQ9UF47 199 aa10.08□□□□□ -0.8
HPS3-203ENST00000460822 NCBP3Q53F19 620 aaKnown RBP9.82□□□□□ -0.84
HPS3-203ENST00000460822 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.76□□□□□ -0.85
HPS3-203ENST00000460822 POTEHQ6S545 545 aa9.61□□□□□ -0.87
HPS3-203ENST00000460822 KCNA4P22459 653 aa9.59□□□□□ -0.87
HPS3-203ENST00000460822 NPM3O75607 178 aaKnown RBP9.58□□□□□ -0.88
HPS3-203ENST00000460822 DSG3P32926 999 aa9.52□□□□□ -0.89
HPS3-203ENST00000460822 U3KPZ7 1027 aaPredicted RBP9.52□□□□□ -0.89
HPS3-203ENST00000460822 CAPN15O75808 1086 aa9.46□□□□□ -0.89
HPS3-203ENST00000460822 SPINK5Q9NQ38 1064 aaPredicted RBP9.46□□□□□ -0.9
HPS3-203ENST00000460822 APLP2Q06481 763 aa9.28□□□□□ -0.92
HPS3-203ENST00000460822 ZNF219Q9P2Y4 722 aaPredicted RBP9.24□□□□□ -0.93
HPS3-203ENST00000460822 SLC4A2P04920 1241 aa9.23□□□□□ -0.93
HPS3-203ENST00000460822 TRHP20396 242 aaPredicted RBP9.22□□□□□ -0.93
HPS3-203ENST00000460822 ABCB7O75027 752 aa9.19□□□□□ -0.94
HPS3-203ENST00000460822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.18□□□□□ -0.94
HPS3-203ENST00000460822 HNRNPUL2Q1KMD3 747 aaKnown RBP9.18□□□□□ -0.94
HPS3-203ENST00000460822 SLC4A1APQ9BWU0 796 aaKnown RBP9.15□□□□□ -0.94
HPS3-203ENST00000460822 RBM42Q9BTD8 480 aaKnown RBP9.11□□□□□ -0.95
HPS3-203ENST00000460822 SAMD1Q6SPF0 538 aaPredicted RBP9.1□□□□□ -0.95
HPS3-203ENST00000460822 CHRDL2Q6WN34 429 aa9.01□□□□□ -0.97
HPS3-203ENST00000460822 POLA2Q14181 598 aa8.92□□□□□ -0.98
HPS3-203ENST00000460822 FOXD4L1Q9NU39 408 aa8.92□□□□□ -0.98
HPS3-203ENST00000460822 MYCNP04198 464 aaPredicted RBP8.9□□□□□ -0.98
HPS3-203ENST00000460822 SP7Q8TDD2 431 aaPredicted RBP8.86□□□□□ -0.99
HPS3-203ENST00000460822 AKT1S1Q96B36 256 aa8.84□□□□□ -0.99
HPS3-203ENST00000460822 ZBTB22O15209 634 aa8.77□□□□□ -1.01
HPS3-203ENST00000460822 ZBTB12Q9Y330 459 aaPredicted RBP8.76□□□□□ -1.01
HPS3-203ENST00000460822 REM2Q8IYK8 340 aaPredicted RBP8.73□□□□□ -1.01
HPS3-203ENST00000460822 PIP4P2Q8N4L2 257 aa8.73□□□□□ -1.01
HPS3-203ENST00000460822 EHMT2Q96KQ7 1210 aa8.68□□□□□ -1.02
HPS3-203ENST00000460822 FXR2P51116 673 aaKnown RBP eCLIP8.66□□□□□ -1.02
HPS3-203ENST00000460822 ATF5Q9Y2D1 282 aaPredicted RBP8.66□□□□□ -1.02
HPS3-203ENST00000460822 HAX1O00165 279 aa8.64□□□□□ -1.03
HPS3-203ENST00000460822 ATXN8OSP0DMR3 200 aa8.63□□□□□ -1.03
HPS3-203ENST00000460822 PITPNM1O00562 1244 aa8.62□□□□□ -1.03
HPS3-203ENST00000460822 OSCARQ8IYS5 282 aa8.61□□□□□ -1.03
HPS3-203ENST00000460822 CSRNP3Q8WYN3 585 aa8.61□□□□□ -1.03
HPS3-203ENST00000460822 PLSCR2Q9NRY7 297 aa8.61□□□□□ -1.03
HPS3-203ENST00000460822 EVX2Q03828 476 aa8.52□□□□□ -1.05
HPS3-203ENST00000460822 SPDYE2BA6NHP3 402 aa8.46□□□□□ -1.06
HPS3-203ENST00000460822 SPDYE6P0CI01 402 aa8.46□□□□□ -1.06
HPS3-203ENST00000460822 SPDYE2Q495Y8 402 aa8.46□□□□□ -1.06
HPS3-203ENST00000460822 C19orf67A6NJJ6 358 aa8.4□□□□□ -1.06
HPS3-203ENST00000460822 PRKAR2AP13861 404 aaKnown RBP8.4□□□□□ -1.06
HPS3-203ENST00000460822 FBLN2P98095 1184 aa8.39□□□□□ -1.07
HPS3-203ENST00000460822 SPDYE1Q8NFV5 336 aaPredicted RBP8.38□□□□□ -1.07
HPS3-203ENST00000460822 GABBR2O75899 941 aa8.33□□□□□ -1.08
HPS3-203ENST00000460822 CLEC11AQ9Y240 323 aa8.33□□□□□ -1.08
HPS3-203ENST00000460822 LHX8Q68G74 356 aa8.31□□□□□ -1.08
HPS3-203ENST00000460822 SSUH2Q9Y2M2 353 aa8.3□□□□□ -1.08
HPS3-203ENST00000460822 ZNF692Q9BU19 519 aaPredicted RBP8.27□□□□□ -1.09
HPS3-203ENST00000460822 MKRN4PQ13434 485 aaPredicted RBP8.26□□□□□ -1.09
HPS3-203ENST00000460822 CHADLQ6NUI6 762 aa8.21□□□□□ -1.1
HPS3-203ENST00000460822 PRR29P0C7W0 189 aa8.19□□□□□ -1.1
HPS3-203ENST00000460822 CLCN6P51797 869 aa8.17□□□□□ -1.1
HPS3-203ENST00000460822 POTEIP0CG38 1075 aa8.15□□□□□ -1.11
HPS3-203ENST00000460822 PABPN1Q86U42 306 aaKnown RBP eCLIP8.12□□□□□ -1.11
HPS3-203ENST00000460822 CD44P16070 742 aaKnown RBP8.1□□□□□ -1.11
HPS3-203ENST00000460822 FARP1Q9Y4F1 1045 aaPredicted RBP8.1□□□□□ -1.11
HPS3-203ENST00000460822 SPDYE4A6NLX3 237 aa8.02□□□□□ -1.12
HPS3-203ENST00000460822 DCBLD2Q96PD2 775 aa8.02□□□□□ -1.13
HPS3-203ENST00000460822 ZNF579Q8NAF0 562 aaKnown RBP8□□□□□ -1.13
HPS3-203ENST00000460822 ZRANB1Q9UGI0 708 aa7.95□□□□□ -1.14
HPS3-203ENST00000460822 CREBZFQ9NS37 354 aa7.91□□□□□ -1.14
HPS3-203ENST00000460822 OTUD5Q96G74 571 aa7.91□□□□□ -1.14
HPS3-203ENST00000460822 STAG3Q9UJ98 1225 aa7.9□□□□□ -1.14
HPS3-203ENST00000460822 GALR2O43603 387 aaPredicted RBP7.88□□□□□ -1.15
HPS3-203ENST00000460822 POTEB2H3BUK9 544 aa7.86□□□□□ -1.15
HPS3-203ENST00000460822 FKBP8Q14318 412 aa7.86□□□□□ -1.15
HPS3-203ENST00000460822 POTEMA6NI47 508 aa7.82□□□□□ -1.16
HPS3-203ENST00000460822 PAK3O75914 559 aaPredicted RBP7.82□□□□□ -1.16
HPS3-203ENST00000460822 PCDH10Q9P2E7 1040 aa7.81□□□□□ -1.16
HPS3-203ENST00000460822 POTEGQ6S5H5 508 aa7.79□□□□□ -1.16
HPS3-203ENST00000460822 NPM1P06748 294 aaKnown RBP eCLIP7.78□□□□□ -1.16
HPS3-203ENST00000460822 PELP1Q8IZL8 1130 aaKnown RBP7.78□□□□□ -1.16
HPS3-203ENST00000460822 PHF12Q96QT6 1004 aa7.78□□□□□ -1.16
HPS3-203ENST00000460822 PROM2Q8N271 834 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms