RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 PDE6AP16499 860 aa11.13□□□□□ -0.63
PCCB-202ENST00000459873 BTDP43251 543 aa11.13□□□□□ -0.63
PCCB-202ENST00000459873 RBM5P52756 815 aaKnown RBP eCLIP11.13□□□□□ -0.63
PCCB-202ENST00000459873 GSTO1P78417 241 aa11.13□□□□□ -0.63
PCCB-202ENST00000459873 NAA16Q6N069 864 aaPredicted RBP11.13□□□□□ -0.63
PCCB-202ENST00000459873 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
PCCB-202ENST00000459873 FAM163AQ96GL9 167 aaPredicted RBP11.13□□□□□ -0.63
PCCB-202ENST00000459873 PRMT6Q96LA8 375 aaPredicted RBP11.13□□□□□ -0.63
PCCB-202ENST00000459873 CNTNAP1P78357 1384 aa11.13□□□□□ -0.63
PCCB-202ENST00000459873 MYH1P12882 1939 aa11.12□□□□□ -0.63
PCCB-202ENST00000459873 GPR75-ASB3A0A0A6YYF3 556 aa11.12□□□□□ -0.63
PCCB-202ENST00000459873 MYO1BO43795 1136 aa11.12□□□□□ -0.63
PCCB-202ENST00000459873 MAP3K12Q12852 859 aa11.12□□□□□ -0.63
PCCB-202ENST00000459873 MAGEB6Q8N7X4 407 aa11.12□□□□□ -0.63
PCCB-202ENST00000459873 KBTBD3Q8NAB2 608 aa11.12□□□□□ -0.63
PCCB-202ENST00000459873 GLIS2Q9BZE0 524 aaPredicted RBP11.12□□□□□ -0.63
PCCB-202ENST00000459873 TDRD3Q9H7E2 651 aaKnown RBP11.12□□□□□ -0.63
PCCB-202ENST00000459873 PPP4R2Q9NY27 417 aa11.12□□□□□ -0.63
PCCB-202ENST00000459873 CLEC11AQ9Y240 323 aa11.12□□□□□ -0.63
PCCB-202ENST00000459873 ITGBL1O95965 494 aaPredicted RBP11.11□□□□□ -0.63
PCCB-202ENST00000459873 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
PCCB-202ENST00000459873 ADD2P35612 726 aa11.11□□□□□ -0.63
PCCB-202ENST00000459873 RHBDL3P58872 404 aa11.11□□□□□ -0.63
PCCB-202ENST00000459873 CDC42EP5Q6NZY7 148 aa11.11□□□□□ -0.63
PCCB-202ENST00000459873 KRT26Q7Z3Y9 468 aa11.11□□□□□ -0.63
PCCB-202ENST00000459873 CNTROBQ8N137 903 aa11.11□□□□□ -0.63
PCCB-202ENST00000459873 DCPSQ96C86 337 aaKnown RBP11.11□□□□□ -0.63
PCCB-202ENST00000459873 VEZTQ9HBM0 779 aa11.11□□□□□ -0.63
PCCB-202ENST00000459873 ZNF70Q9UC06 446 aaPredicted RBP11.11□□□□□ -0.63
PCCB-202ENST00000459873 PPP2R3BQ9Y5P8 575 aa11.11□□□□□ -0.63
PCCB-202ENST00000459873 ATRNL1Q5VV63 1379 aa11.11□□□□□ -0.63
PCCB-202ENST00000459873 ATAD5Q96QE3 1844 aa11.11□□□□□ -0.63
PCCB-202ENST00000459873 ZNF532Q9HCE3 1301 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 DOCK1Q14185 1865 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 BAZ2AQ9UIF9 1905 aaKnown RBP11.1□□□□□ -0.63
PCCB-202ENST00000459873 TRAF5O00463 557 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 MAP4K4O95819 1239 aaPredicted RBP11.1□□□□□ -0.63
PCCB-202ENST00000459873 CHGBP05060 677 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 CACNB3P54284 484 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 NFIAQ12857 509 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 TNFAIP1Q13829 316 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 SLC9C2Q5TAH2 1124 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 FKBP1CQ5VVH2 108 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 CDC37L1Q7L3B6 337 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 SKAP1Q86WV1 359 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 SULF1Q8IWU6 871 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 CDCA5Q96FF9 252 aa11.1□□□□□ -0.63
PCCB-202ENST00000459873 RIOK1Q9BRS2 568 aaKnown RBP11.1□□□□□ -0.63
PCCB-202ENST00000459873 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.1□□□□□ -0.632e-7■■■■□ 20.5
PCCB-202ENST00000459873 SCAF8Q9UPN6 1271 aaKnown RBP11.1□□□□□ -0.63
PCCB-202ENST00000459873 WDHD1O75717 1129 aaPredicted RBP11.09□□□□□ -0.63
PCCB-202ENST00000459873 LDHCP07864 332 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 CYP7A1P22680 504 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 C1QTNF8P60827 252 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 FMR1Q06787 632 aaKnown RBP eCLIP11.09□□□□□ -0.63
PCCB-202ENST00000459873 UBE3CQ15386 1083 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 TTC22Q5TAA0 569 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 DLK2Q6UY11 383 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 FAM83AQ86UY5 434 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 CDAN1Q8IWY9 1227 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 MIGA1Q8NAN2 632 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
PCCB-202ENST00000459873 FSD1Q9BTV5 496 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 IDI2Q9BXS1 227 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 AATFQ9NY61 560 aaKnown RBP eCLIP11.09□□□□□ -0.63
PCCB-202ENST00000459873 TMOD2Q9NZR1 351 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 FAM198AQ9UFP1 575 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 MYH8P13535 1937 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 FLT1P17948 1338 aa11.09□□□□□ -0.63
PCCB-202ENST00000459873 ZFYP08048 801 aaPredicted RBP11.08□□□□□ -0.64
PCCB-202ENST00000459873 PPP4CP60510 307 aa11.08□□□□□ -0.64
PCCB-202ENST00000459873 DYNLL1P63167 89 aaKnown RBP11.08□□□□□ -0.64
PCCB-202ENST00000459873 RASA3Q14644 834 aa11.08□□□□□ -0.64
PCCB-202ENST00000459873 ZSCAN25Q6NSZ9 544 aa11.08□□□□□ -0.64
PCCB-202ENST00000459873 USP48Q86UV5 1035 aa11.08□□□□□ -0.64
PCCB-202ENST00000459873 CERS3Q8IU89 383 aa11.08□□□□□ -0.64
PCCB-202ENST00000459873 EVI5LQ96CN4 794 aa11.08□□□□□ -0.64
PCCB-202ENST00000459873 TEPSINQ96N21 525 aa11.08□□□□□ -0.64
PCCB-202ENST00000459873 DEFB129Q9H1M3 183 aa11.08□□□□□ -0.64
PCCB-202ENST00000459873 DDX4Q9NQI0 724 aaKnown RBP11.08□□□□□ -0.64
PCCB-202ENST00000459873 TCP10L2B9ZVM9 353 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 NPM3O75607 178 aaKnown RBP11.07□□□□□ -0.64
PCCB-202ENST00000459873 MBD4O95243 580 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 BAG3O95817 575 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 PLCG2P16885 1265 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 TNNI2P48788 182 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 RGS3P49796 1198 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 TICAM2Q86XR7 235 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 TEX11Q8IYF3 940 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 LCORLQ8N3X6 602 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 APPBP2Q92624 585 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 NOL10Q9BSC4 688 aaKnown RBP11.07□□□□□ -0.64
PCCB-202ENST00000459873 TMEM39BQ9GZU3 492 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 USP40Q9NVE5 1235 aa11.07□□□□□ -0.64
PCCB-202ENST00000459873 MAGEB6P1A0A0J9YX57 407 aa11.06□□□□□ -0.64
PCCB-202ENST00000459873 RNF113AO15541 343 aaKnown RBP11.06□□□□□ -0.64
PCCB-202ENST00000459873 ENTPD3O75355 529 aa11.06□□□□□ -0.64
PCCB-202ENST00000459873 LRRFIP1Q32MZ4 808 aaKnown RBP11.06□□□□□ -0.64
PCCB-202ENST00000459873 FAM151AQ8WW52 585 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms