RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 CEP57L1Q8IYX8 460 aa24.64■■□□□ 1.54
PUF60-203ENST00000453551 ALG1Q9BT22 464 aa24.64■■□□□ 1.54
PUF60-203ENST00000453551 LOC102724428A0A0B4J2F2 783 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 B4E1Z4 1266 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 RGL2O15211 777 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 ZBTB43O43298 467 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 CMA1P23946 247 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 GTF2F1P35269 517 aaKnown RBP eCLIP24.63■■□□□ 1.537e-9■■■■□ 26.6
PUF60-203ENST00000453551 IGHMBP2P38935 993 aaKnown RBP24.63■■□□□ 1.53
PUF60-203ENST00000453551 SIK1P57059 783 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 NTRK3Q16288 839 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 MAGEB6Q8N7X4 407 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 HELBQ8NG08 1087 aaPredicted RBP24.63■■□□□ 1.53
PUF60-203ENST00000453551 MAP7D2Q96T17 732 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 KRT23Q9C075 422 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 NAT10Q9H0A0 1025 aaKnown RBP24.63■■□□□ 1.53
PUF60-203ENST00000453551 NAPBQ9H115 298 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 DENND2AQ9ULE3 1009 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 CHD4Q14839 1912 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 ECM29Q5VYK3 1845 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 PPFIA3O75145 1194 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 MBD4O95243 580 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 ATP6V1AP38606 617 aa24.63■■□□□ 1.53
PUF60-203ENST00000453551 DNTTIP2Q5QJE6 756 aaKnown RBP24.63■■□□□ 1.53
PUF60-203ENST00000453551 AXDND1Q5T1B0 1012 aaPredicted RBP24.63■■□□□ 1.53
PUF60-203ENST00000453551 RCAN1P53805 252 aa24.62■■□□□ 1.53
PUF60-203ENST00000453551 SLC39A14Q15043 492 aa24.62■■□□□ 1.53
PUF60-203ENST00000453551 CCDC186Q7Z3E2 898 aa24.62■■□□□ 1.53
PUF60-203ENST00000453551 NKX2-3Q8TAU0 364 aa24.62■■□□□ 1.53
PUF60-203ENST00000453551 STAG1Q8WVM7 1258 aa24.62■■□□□ 1.53
PUF60-203ENST00000453551 TIGD1Q96MW7 591 aa24.62■■□□□ 1.53
PUF60-203ENST00000453551 COL5A3P25940 1745 aaPredicted RBP24.62■■□□□ 1.53
PUF60-203ENST00000453551 FAM237AA0A1B0GTK4 181 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 GSG1L2A8MUP6 293 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 PPP6R2O75170 966 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 NDUFA8P51970 172 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 AKNAD1Q5T1N1 836 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 DHX40Q8IX18 779 aaKnown RBP24.61■■□□□ 1.53
PUF60-203ENST00000453551 SEC31BQ9NQW1 1179 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 NEMFO60524 1076 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 POLR3DP05423 398 aaPredicted RBP24.61■■□□□ 1.53
PUF60-203ENST00000453551 CDC27P30260 824 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 ITPK1Q13572 414 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 TMEM67Q5HYA8 995 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 KRT40Q6A162 431 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 SMARCC1Q92922 1105 aaPredicted RBP24.61■■□□□ 1.53
PUF60-203ENST00000453551 CDC5LQ99459 802 aaKnown RBP24.61■■□□□ 1.53
PUF60-203ENST00000453551 FAM217BQ9NTX9 383 aaPredicted RBP24.61■■□□□ 1.53
PUF60-203ENST00000453551 KIAA1468Q9P260 1216 aa24.61■■□□□ 1.53
PUF60-203ENST00000453551 GOLGA8AA7E2F4 631 aa24.6■■□□□ 1.53
PUF60-203ENST00000453551 BARGINQ6ZT62 677 aa24.6■■□□□ 1.53
PUF60-203ENST00000453551 RAB11FIP4Q86YS3 637 aa24.6■■□□□ 1.53
PUF60-203ENST00000453551 C17orf53Q8N3J3 647 aaPredicted RBP24.6■■□□□ 1.53
PUF60-203ENST00000453551 NACAP1Q9BZK3 213 aa24.6■■□□□ 1.53
PUF60-203ENST00000453551 PDCL3Q9H2J4 239 aa24.6■■□□□ 1.53
PUF60-203ENST00000453551 CLIP2Q9UDT6 1046 aa24.6■■□□□ 1.53
PUF60-203ENST00000453551 MYH14Q7Z406 1995 aaKnown RBP24.59■■□□□ 1.53
PUF60-203ENST00000453551 A0A1B0GVL5 298 aa24.59■■□□□ 1.53
PUF60-203ENST00000453551 U2AF2P26368 475 aaKnown RBP eCLIP24.59■■□□□ 1.53
PUF60-203ENST00000453551 RBM6P78332 1123 aaKnown RBP24.59■■□□□ 1.53
PUF60-203ENST00000453551 MTERF4Q7Z6M4 381 aaKnown RBP24.59■■□□□ 1.53
PUF60-203ENST00000453551 JMYQ8N9B5 988 aa24.59■■□□□ 1.53
PUF60-203ENST00000453551 MARCH10Q8NA82 808 aaPredicted RBP24.59■■□□□ 1.53
PUF60-203ENST00000453551 WASF1Q92558 559 aa24.59■■□□□ 1.53
PUF60-203ENST00000453551 ZNF652Q9Y2D9 606 aa24.59■■□□□ 1.53
PUF60-203ENST00000453551 ZNF804BA4D1E1 1349 aa24.59■■□□□ 1.53
PUF60-203ENST00000453551 IARSP41252 1262 aaKnown RBP24.58■■□□□ 1.53
PUF60-203ENST00000453551 SPATA31A5Q5VU36 1347 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 CLEC4GQ6UXB4 293 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 VPS37DQ86XT2 251 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 SPATA31A7Q8IWB4 1347 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 DRC7Q8IY82 874 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 SDF4Q9BRK5 362 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 ARMT1Q9H993 441 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 A0A1B0GUL6 1792 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 BECN2A8MW95 431 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 IFNAR1P17181 557 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 SENP2Q9HC62 589 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 ZSWIM5Q9P217 1185 aa24.58■■□□□ 1.53
PUF60-203ENST00000453551 NIP7Q9Y221 180 aaKnown RBP eCLIP24.58■■□□□ 1.53
PUF60-203ENST00000453551 FMNL1O95466 1100 aaPredicted RBP24.57■■□□□ 1.52
PUF60-203ENST00000453551 PTPAQ15257 358 aa24.57■■□□□ 1.52
PUF60-203ENST00000453551 NFXL1Q6ZNB6 911 aa24.57■■□□□ 1.52
PUF60-203ENST00000453551 SLC12A7Q9Y666 1083 aa24.57■■□□□ 1.52
PUF60-203ENST00000453551 IFIT3O14879 490 aaKnown RBP24.56■■□□□ 1.52
PUF60-203ENST00000453551 RANBP6O60518 1105 aaKnown RBP24.56■■□□□ 1.52
PUF60-203ENST00000453551 CHRNDQ07001 517 aa24.56■■□□□ 1.52
PUF60-203ENST00000453551 MFSD6Q6ZSS7 791 aa24.56■■□□□ 1.52
PUF60-203ENST00000453551 MICU3Q86XE3 530 aa24.56■■□□□ 1.52
PUF60-203ENST00000453551 RNF41Q9H4P4 317 aaPredicted RBP24.56■■□□□ 1.52
PUF60-203ENST00000453551 GJB4Q9NTQ9 266 aa24.56■■□□□ 1.52
PUF60-203ENST00000453551 HPSEQ9Y251 543 aa24.56■■□□□ 1.52
PUF60-203ENST00000453551 TACC3Q9Y6A5 838 aa24.56■■□□□ 1.52
PUF60-203ENST00000453551 KAT6BQ8WYB5 2073 aa24.56■■□□□ 1.52
PUF60-203ENST00000453551 CCDC69A6NI79 296 aa24.56■■□□□ 1.52
PUF60-203ENST00000453551 ZNF202O95125 648 aa24.56■■□□□ 1.52
PUF60-203ENST00000453551 TMTC2Q8N394 836 aa24.56■■□□□ 1.52
PUF60-203ENST00000453551 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.56■■□□□ 1.52
PUF60-203ENST00000453551 PFKFB1P16118 471 aa24.55■■□□□ 1.52
PUF60-203ENST00000453551 BCAMP50895 628 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms