RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 SPIDRQ14159 915 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 POSTNQ15063 836 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 NCAPH2Q6IBW4 605 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 WDR93Q6P2C0 686 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 SLC4A10Q6U841 1118 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CNNM3Q8NE01 707 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 SPZ1Q9BXG8 430 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 KCNG1Q9UIX4 513 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CETN3O15182 167 aa3.28□□□□□ -1.89
CHD9-203ENST00000447540 RAD21O60216 631 aa3.28□□□□□ -1.89
CHD9-203ENST00000447540 STX10O60499 249 aa3.28□□□□□ -1.89
CHD9-203ENST00000447540 ATN1P54259 1190 aaPredicted RBP3.28□□□□□ -1.89
CHD9-203ENST00000447540 CNGA3Q16281 694 aa3.28□□□□□ -1.89
CHD9-203ENST00000447540 SYNE3Q6ZMZ3 975 aa3.28□□□□□ -1.89
CHD9-203ENST00000447540 RAB11FIP4Q86YS3 637 aa3.28□□□□□ -1.89
CHD9-203ENST00000447540 TRIM42Q8IWZ5 723 aa3.28□□□□□ -1.89
CHD9-203ENST00000447540 GALNT15Q8N3T1 639 aa3.28□□□□□ -1.89
CHD9-203ENST00000447540 RNF10Q8N5U6 811 aaKnown RBP3.28□□□□□ -1.89
CHD9-203ENST00000447540 MMTAG2Q9BU76 263 aaKnown RBP3.28□□□□□ -1.89
CHD9-203ENST00000447540 FAM53CQ9NYF3 392 aa3.28□□□□□ -1.89
CHD9-203ENST00000447540 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.28□□□□□ -1.89
CHD9-203ENST00000447540 H3BQV1 296 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 STX6O43752 255 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 PTGS1P23219 599 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 PARP10Q53GL7 1025 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 IFFO2Q5TF58 517 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 NXNQ6DKJ4 435 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 NYAP1Q6ZVC0 841 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 PPP1R14CQ8TAE6 165 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 SPATA32Q96LK8 384 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 TM6SF1Q9BZW5 370 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 TRPV5Q9NQA5 729 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 GAPVD1Q14C86 1478 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 YEATS4O95619 227 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 USP5P45974 858 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 MXRA7P84157 204 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 SCRN1Q12765 414 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 GRIK3Q13003 919 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 SREK1Q8WXA9 508 aaKnown RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 SCLT1Q96NL6 688 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 CAPS2Q9BXY5 557 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 IL1RAPL1Q9NZN1 696 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 ADGRL1O94910 1474 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 KRT83P78385 493 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 KLC1Q07866 573 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 EIF2B5Q13144 721 aaKnown RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 STIM1Q13586 685 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 SOGA3Q5TF21 947 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 PABPN1Q86U42 306 aaKnown RBP eCLIP3.27□□□□□ -1.89
CHD9-203ENST00000447540 RASEFQ8IZ41 740 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 ATRIPQ8WXE1 791 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 ITPKCQ96DU7 683 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 E9PMD0 336 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 DIAPH2O60879 1101 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 PENKP01210 267 aaPredicted RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 LIG3P49916 1009 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 HNRNPMP52272 730 aaKnown RBP eCLIP3.27□□□□□ -1.897e-7■■■■□ 21.6
CHD9-203ENST00000447540 MTMR3Q13615 1198 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 RASGRF1Q13972 1273 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 KPNB1Q14974 876 aaKnown RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 SART3Q15020 963 aaKnown RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 GLE1Q53GS7 698 aaKnown RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 NLRP9Q7RTR0 991 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 CROCCP3Q8IVE0 287 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 SPINK5Q9NQ38 1064 aaPredicted RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 SLC4A7Q9Y6M7 1214 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 KIAA0586Q9BVV6 1533 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 B4DLN1 442 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 SMAPO00193 183 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 USO1O60763 962 aaKnown RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 WDHD1O75717 1129 aaPredicted RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 BCRP11274 1271 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 WLSQ5T9L3 541 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 C10orf88Q9H8K7 445 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 ARAP1Q96P48 1450 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 IQANK1A0A1B0GTG1 560 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 TRIM66O15016 1216 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 AARSP49588 968 aaKnown RBP eCLIP3.27□□□□□ -1.892e-6■■■■■ 61.6
CHD9-203ENST00000447540 SLC44A4Q53GD3 710 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 CCDC63Q8NA47 563 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 EZH1Q92800 747 aaPredicted RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 IL20Q9NYY1 176 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 KDM6BO15054 1643 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 CCDC189A1A4V9 331 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 TMEM259Q4ZIN3 620 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 MAP3K21Q5TCX8 1036 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 VPS53Q5VIR6 699 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 HOOK3Q86VS8 718 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 NCAPG2Q86XI2 1143 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 PARP9Q8IXQ6 854 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 CFAP57Q96MR6 1250 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 TRIM55Q9BYV6 548 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 TSPYL2Q9H2G4 693 aaPredicted RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 BCAP29Q9UHQ4 241 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 EHBP1L1Q8N3D4 1523 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 AOX1Q06278 1338 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 CBFA2T3O75081 653 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 ATP5DP30049 168 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 RETREG2Q8NC44 543 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 TRAIPQ9BWF2 469 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms