RNA–Protein interactions for RNA: ENST00000443796.5

EPHA4-209, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 584 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-209ENST00000443796 RFC4P35249 363 aa9.47□□□□□ -0.89
EPHA4-209ENST00000443796 SWI5Q1ZZU3 235 aa9.47□□□□□ -0.89
EPHA4-209ENST00000443796 HSP90AB2PQ58FF8 381 aa9.47□□□□□ -0.89
EPHA4-209ENST00000443796 WDR44Q5JSH3 913 aa9.47□□□□□ -0.89
EPHA4-209ENST00000443796 GAS2L2Q8NHY3 880 aa9.47□□□□□ -0.89
EPHA4-209ENST00000443796 COL5A3P25940 1745 aaPredicted RBP9.47□□□□□ -0.89
EPHA4-209ENST00000443796 ROCK2O75116 1388 aaKnown RBP9.47□□□□□ -0.89
EPHA4-209ENST00000443796 SERTM1A2A2V5 107 aa9.46□□□□□ -0.9
EPHA4-209ENST00000443796 RPS6KA4O75676 772 aa9.46□□□□□ -0.9
EPHA4-209ENST00000443796 L3MBTL2Q969R5 705 aa9.46□□□□□ -0.9
EPHA4-209ENST00000443796 SRP68Q9UHB9 627 aaKnown RBP9.46□□□□□ -0.9
EPHA4-209ENST00000443796 PASKQ96RG2 1323 aa9.46□□□□□ -0.9
EPHA4-209ENST00000443796 ZNF831Q5JPB2 1677 aa9.45□□□□□ -0.9
EPHA4-209ENST00000443796 CARNS1A5YM72 827 aa9.45□□□□□ -0.9
EPHA4-209ENST00000443796 NFKBIEO00221 500 aa9.45□□□□□ -0.9
EPHA4-209ENST00000443796 NOS2P35228 1153 aa9.45□□□□□ -0.9
EPHA4-209ENST00000443796 PSMA6P60900 246 aaKnown RBP9.45□□□□□ -0.9
EPHA4-209ENST00000443796 RIPOR1Q6ZS17 1223 aa9.45□□□□□ -0.9
EPHA4-209ENST00000443796 CCDC155Q8N6L0 562 aa9.45□□□□□ -0.9
EPHA4-209ENST00000443796 RETREG2Q8NC44 543 aa9.45□□□□□ -0.9
EPHA4-209ENST00000443796 CNTNAP4Q9C0A0 1308 aa9.45□□□□□ -0.9
EPHA4-209ENST00000443796 INSRP06213 1382 aa9.45□□□□□ -0.9
EPHA4-209ENST00000443796 SLC35F4A4IF30 521 aa9.44□□□□□ -0.9
EPHA4-209ENST00000443796 POLRMTO00411 1230 aaKnown RBP9.44□□□□□ -0.9
EPHA4-209ENST00000443796 IGFBP4P22692 258 aa9.44□□□□□ -0.9
EPHA4-209ENST00000443796 TEAD4Q15561 434 aa9.44□□□□□ -0.9
EPHA4-209ENST00000443796 VTI1AQ96AJ9 217 aa9.44□□□□□ -0.9
EPHA4-209ENST00000443796 DYRK1BQ9Y463 629 aa9.44□□□□□ -0.9
EPHA4-209ENST00000443796 DLEC1Q9Y238 1755 aa9.43□□□□□ -0.9
EPHA4-209ENST00000443796 NCAPD2Q15021 1401 aa9.43□□□□□ -0.9
EPHA4-209ENST00000443796 USP42Q9H9J4 1324 aaKnown RBP9.43□□□□□ -0.9
EPHA4-209ENST00000443796 TMEM88BA6NKF7 163 aa9.43□□□□□ -0.9
EPHA4-209ENST00000443796 C21orf2O43822 256 aa9.43□□□□□ -0.9
EPHA4-209ENST00000443796 TM4SF1P30408 202 aa9.43□□□□□ -0.9
EPHA4-209ENST00000443796 ZDHHC1Q8WTX9 485 aa9.43□□□□□ -0.9
EPHA4-209ENST00000443796 GPAMQ9HCL2 828 aa9.43□□□□□ -0.9
EPHA4-209ENST00000443796 NXF1Q9UBU9 619 aaKnown RBP9.43□□□□□ -0.9
EPHA4-209ENST00000443796 SPG7Q9UQ90 795 aa9.43□□□□□ -0.9
EPHA4-209ENST00000443796 HCN4Q9Y3Q4 1203 aa9.43□□□□□ -0.9
EPHA4-209ENST00000443796 DICER1Q9UPY3 1922 aaKnown RBP9.43□□□□□ -0.9
EPHA4-209ENST00000443796 A0A1B0GTH6 734 aa9.42□□□□□ -0.9
EPHA4-209ENST00000443796 PPFIA3O75145 1194 aa9.42□□□□□ -0.9
EPHA4-209ENST00000443796 PHKG2P15735 406 aa9.42□□□□□ -0.9
EPHA4-209ENST00000443796 WEE1P30291 646 aa9.42□□□□□ -0.9
EPHA4-209ENST00000443796 CLP1Q92989 425 aaKnown RBP9.42□□□□□ -0.9
EPHA4-209ENST00000443796 FLT4P35916 1363 aa9.41□□□□□ -0.9
EPHA4-209ENST00000443796 AFDNP55196 1824 aaKnown RBP9.41□□□□□ -0.9
EPHA4-209ENST00000443796 DDNO94850 711 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-209ENST00000443796 F11P03951 625 aa9.41□□□□□ -0.9
EPHA4-209ENST00000443796 MSX1P28360 303 aa9.41□□□□□ -0.9
EPHA4-209ENST00000443796 PDE4CQ08493 712 aa9.41□□□□□ -0.9
EPHA4-209ENST00000443796 SH3PXD2AQ5TCZ1 1133 aa9.41□□□□□ -0.9
EPHA4-209ENST00000443796 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
EPHA4-209ENST00000443796 TTLL6Q8N841 843 aa9.41□□□□□ -0.9
EPHA4-209ENST00000443796 USTQ9Y2C2 406 aa9.41□□□□□ -0.9
EPHA4-209ENST00000443796 ADAMTS7Q9UKP4 1686 aa9.41□□□□□ -0.9
EPHA4-209ENST00000443796 RASSF10A6NK89 507 aa9.4□□□□□ -0.9
EPHA4-209ENST00000443796 EML1O00423 815 aa9.4□□□□□ -0.9
EPHA4-209ENST00000443796 FYB1O15117 783 aa9.4□□□□□ -0.9
EPHA4-209ENST00000443796 ATP2B4P23634 1241 aa9.4□□□□□ -0.9
EPHA4-209ENST00000443796 TXLNAP40222 546 aa9.4□□□□□ -0.9
EPHA4-209ENST00000443796 MAP2K1Q02750 393 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-209ENST00000443796 ARSJQ5FYB0 599 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-209ENST00000443796 BICDL1Q6ZP65 573 aa9.4□□□□□ -0.9
EPHA4-209ENST00000443796 LDHDQ86WU2 507 aa9.4□□□□□ -0.9
EPHA4-209ENST00000443796 IFNL2Q8IZJ0 200 aa9.4□□□□□ -0.9
EPHA4-209ENST00000443796 PGBD3Q8N328 593 aa9.4□□□□□ -0.9
EPHA4-209ENST00000443796 PUS7Q96PZ0 661 aaKnown RBP9.4□□□□□ -0.9
EPHA4-209ENST00000443796 C2orf49Q9BVC5 232 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-209ENST00000443796 GGNBP2Q9H3C7 697 aa9.4□□□□□ -0.9
EPHA4-209ENST00000443796 NRXN2Q9P2S2 1712 aa9.39□□□□□ -0.91
EPHA4-209ENST00000443796 WDR33Q9C0J8 1336 aaKnown RBP9.39□□□□□ -0.91
EPHA4-209ENST00000443796 FER1L6Q2WGJ9 1857 aa9.39□□□□□ -0.91
EPHA4-209ENST00000443796 ITGA6P23229 1130 aa9.39□□□□□ -0.91
EPHA4-209ENST00000443796 CRKLP46109 303 aaKnown RBP9.39□□□□□ -0.91
EPHA4-209ENST00000443796 DEFB115Q30KQ5 88 aa9.39□□□□□ -0.91
EPHA4-209ENST00000443796 RUBCNLQ9H714 662 aa9.39□□□□□ -0.91
EPHA4-209ENST00000443796 CXXC1Q9P0U4 656 aaPredicted RBP9.39□□□□□ -0.91
EPHA4-209ENST00000443796 KIF24Q5T7B8 1368 aa9.38□□□□□ -0.91
EPHA4-209ENST00000443796 TONSLQ96HA7 1378 aa9.38□□□□□ -0.91
EPHA4-209ENST00000443796 CDC14CA4D256 554 aa9.38□□□□□ -0.91
EPHA4-209ENST00000443796 OCLNQ16625 522 aa9.38□□□□□ -0.91
EPHA4-209ENST00000443796 USPL1Q5W0Q7 1092 aa9.38□□□□□ -0.91
EPHA4-209ENST00000443796 C2CD5Q86YS7 1000 aa9.38□□□□□ -0.91
EPHA4-209ENST00000443796 STAG2Q8N3U4 1231 aa9.38□□□□□ -0.91
EPHA4-209ENST00000443796 MKNK1Q9BUB5 465 aa9.38□□□□□ -0.91
EPHA4-209ENST00000443796 PHACTR1Q9C0D0 580 aa9.38□□□□□ -0.91
EPHA4-209ENST00000443796 TAF1DQ9H5J8 278 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-209ENST00000443796 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.38□□□□□ -0.91
EPHA4-209ENST00000443796 ZDHHC3Q9NYG2 299 aa9.38□□□□□ -0.91
EPHA4-209ENST00000443796 THSD7BQ9C0I4 1608 aa9.38□□□□□ -0.91
EPHA4-209ENST00000443796 CARMIL3Q8ND23 1372 aa9.37□□□□□ -0.91
EPHA4-209ENST00000443796 ERVV-2B6SEH9 535 aa9.37□□□□□ -0.91
EPHA4-209ENST00000443796 TERTO14746 1132 aaKnown RBP9.37□□□□□ -0.91
EPHA4-209ENST00000443796 FKBP5Q13451 457 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-209ENST00000443796 NFIXQ14938 502 aa9.37□□□□□ -0.91
EPHA4-209ENST00000443796 INTS5Q6P9B9 1019 aaKnown RBP9.37□□□□□ -0.91
EPHA4-209ENST00000443796 ALDH16A1Q8IZ83 802 aa9.37□□□□□ -0.91
EPHA4-209ENST00000443796 VWA5B2Q8N398 1253 aa9.37□□□□□ -0.91
EPHA4-209ENST00000443796 C1orf216Q8TAB5 229 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms