RNA–Protein interactions for RNA: ENST00000443796.5

EPHA4-209, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 584 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-209ENST00000443796 AEBP2Q6ZN18 517 aaPredicted RBP25.98■■□□□ 1.75
EPHA4-209ENST00000443796 CHIC1Q5VXU3 224 aa25.49■■□□□ 1.67
EPHA4-209ENST00000443796 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
EPHA4-209ENST00000443796 SENP3Q9H4L4 574 aaPredicted RBP22.06■■□□□ 1.12
EPHA4-209ENST00000443796 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
EPHA4-209ENST00000443796 FOXD1Q16676 465 aa20.46■□□□□ 0.87
EPHA4-209ENST00000443796 ADRA2BP18089 450 aa19.79■□□□□ 0.76
EPHA4-209ENST00000443796 PPP6R1Q9UPN7 881 aa19.76■□□□□ 0.75
EPHA4-209ENST00000443796 PIAS4Q8N2W9 510 aaPredicted RBP19.36■□□□□ 0.69
EPHA4-209ENST00000443796 MSH5O43196 834 aa18.83■□□□□ 0.6
EPHA4-209ENST00000443796 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.52
EPHA4-209ENST00000443796 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
EPHA4-209ENST00000443796 KCNA4P22459 653 aa18.01■□□□□ 0.47
EPHA4-209ENST00000443796 MAPK8IP2Q13387 824 aaPredicted RBP17.93■□□□□ 0.46
EPHA4-209ENST00000443796 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
EPHA4-209ENST00000443796 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
EPHA4-209ENST00000443796 DMRT2Q9Y5R5 561 aa17.6■□□□□ 0.41
EPHA4-209ENST00000443796 NPM3O75607 178 aaKnown RBP17.59■□□□□ 0.41
EPHA4-209ENST00000443796 NISCHQ9Y2I1 1504 aa17.43■□□□□ 0.38
EPHA4-209ENST00000443796 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
EPHA4-209ENST00000443796 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
EPHA4-209ENST00000443796 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
EPHA4-209ENST00000443796 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
EPHA4-209ENST00000443796 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
EPHA4-209ENST00000443796 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
EPHA4-209ENST00000443796 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
EPHA4-209ENST00000443796 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
EPHA4-209ENST00000443796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.24
EPHA4-209ENST00000443796 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
EPHA4-209ENST00000443796 FOXD4L1Q9NU39 408 aa16.55■□□□□ 0.24
EPHA4-209ENST00000443796 ZBTB22O15209 634 aa16.53■□□□□ 0.24
EPHA4-209ENST00000443796 ABCC9O60706 1549 aa16.4■□□□□ 0.22
EPHA4-209ENST00000443796 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
EPHA4-209ENST00000443796 U3KPZ7 1027 aaPredicted RBP16.23■□□□□ 0.19
EPHA4-209ENST00000443796 RNF39Q9H2S5 420 aa16.12■□□□□ 0.17
EPHA4-209ENST00000443796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
EPHA4-209ENST00000443796 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
EPHA4-209ENST00000443796 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
EPHA4-209ENST00000443796 C1QBPQ07021 282 aaKnown RBP15.95■□□□□ 0.14
EPHA4-209ENST00000443796 ATXN8OSP0DMR3 200 aa15.92■□□□□ 0.14
EPHA4-209ENST00000443796 APLP2Q06481 763 aa15.92■□□□□ 0.14
EPHA4-209ENST00000443796 CCDC180Q9P1Z9 1646 aa15.85■□□□□ 0.13
EPHA4-209ENST00000443796 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
EPHA4-209ENST00000443796 SPINK5Q9NQ38 1064 aaPredicted RBP15.77■□□□□ 0.12
EPHA4-209ENST00000443796 CAPN15O75808 1086 aa15.76■□□□□ 0.11
EPHA4-209ENST00000443796 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
EPHA4-209ENST00000443796 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
EPHA4-209ENST00000443796 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
EPHA4-209ENST00000443796 ABCB7O75027 752 aa15.46■□□□□ 0.07
EPHA4-209ENST00000443796 POLA2Q14181 598 aa15.45■□□□□ 0.06
EPHA4-209ENST00000443796 DSG3P32926 999 aa15.39■□□□□ 0.05
EPHA4-209ENST00000443796 RB1CC1Q8TDY2 1594 aa15.34■□□□□ 0.05
EPHA4-209ENST00000443796 FBLN2P98095 1184 aa15.2■□□□□ 0.02
EPHA4-209ENST00000443796 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
EPHA4-209ENST00000443796 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
EPHA4-209ENST00000443796 NACADO15069 1562 aa15.11■□□□□ 0.01
EPHA4-209ENST00000443796 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
EPHA4-209ENST00000443796 UNC13AQ9UPW8 1703 aa15.03■□□□□ -0
EPHA4-209ENST00000443796 FKBP8Q14318 412 aa15.01□□□□□ -0.01
EPHA4-209ENST00000443796 BICRAQ9NZM4 1560 aa14.97□□□□□ -0.01
EPHA4-209ENST00000443796 DNAJC5Q9H3Z4 198 aa14.95□□□□□ -0.02
EPHA4-209ENST00000443796 DCAF8L2P0C7V8 631 aa14.92□□□□□ -0.02
EPHA4-209ENST00000443796 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
EPHA4-209ENST00000443796 SPDYE4A6NLX3 237 aa14.88□□□□□ -0.03
EPHA4-209ENST00000443796 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
EPHA4-209ENST00000443796 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
EPHA4-209ENST00000443796 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
EPHA4-209ENST00000443796 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
EPHA4-209ENST00000443796 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
EPHA4-209ENST00000443796 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
EPHA4-209ENST00000443796 MYO15BQ96JP2 1530 aa14.73□□□□□ -0.05
EPHA4-209ENST00000443796 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
EPHA4-209ENST00000443796 SHROOM4Q9ULL8 1493 aa14.65□□□□□ -0.06
EPHA4-209ENST00000443796 SSUH2Q9Y2M2 353 aa14.63□□□□□ -0.07
EPHA4-209ENST00000443796 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
EPHA4-209ENST00000443796 PROM2Q8N271 834 aa14.54□□□□□ -0.08
EPHA4-209ENST00000443796 AKT1S1Q96B36 256 aa14.52□□□□□ -0.09
EPHA4-209ENST00000443796 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
EPHA4-209ENST00000443796 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
EPHA4-209ENST00000443796 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
EPHA4-209ENST00000443796 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
EPHA4-209ENST00000443796 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
EPHA4-209ENST00000443796 ZCCHC6Q5VYS8 1495 aaKnown RBP14.33□□□□□ -0.12
EPHA4-209ENST00000443796 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
EPHA4-209ENST00000443796 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
EPHA4-209ENST00000443796 CUX2O14529 1486 aa14.32□□□□□ -0.12
EPHA4-209ENST00000443796 PITPNM1O00562 1244 aa14.22□□□□□ -0.13
EPHA4-209ENST00000443796 VASPP50552 380 aaPredicted RBP14.22□□□□□ -0.13
EPHA4-209ENST00000443796 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
EPHA4-209ENST00000443796 ERCC6Q03468 1493 aa14.17□□□□□ -0.14
EPHA4-209ENST00000443796 MIER1Q8N108 512 aa14.15□□□□□ -0.14
EPHA4-209ENST00000443796 PLCD3Q8N3E9 789 aa14.15□□□□□ -0.14
EPHA4-209ENST00000443796 PLEKHG5O94827 1062 aa14.08□□□□□ -0.16
EPHA4-209ENST00000443796 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
EPHA4-209ENST00000443796 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
EPHA4-209ENST00000443796 CHRDL2Q6WN34 429 aa14.04□□□□□ -0.16
EPHA4-209ENST00000443796 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
EPHA4-209ENST00000443796 NCAPD3P42695 1498 aa13.98□□□□□ -0.17
EPHA4-209ENST00000443796 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
EPHA4-209ENST00000443796 NESP48681 1621 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms