RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 KLRK1P26718 216 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 DMTNQ08495 405 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 HPS5Q9UPZ3 1129 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 TACC3Q9Y6A5 838 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 XDHP47989 1333 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 SERPINB2P05120 415 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 TMC4Q7Z404 712 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 LCORLQ8N3X6 602 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 ZSCAN20P17040 1043 aaPredicted RBP15.5■□□□□ 0.07
ACTN4-204ENST00000440400 ST5P78524 1137 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 CCDC173Q0VFZ6 552 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 ZNF827Q17R98 1081 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 PPP4R3BQ5MIZ7 849 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 BRIP1Q9BX63 1249 aa15.5■□□□□ 0.07
ACTN4-204ENST00000440400 HMGN5P82970 282 aaKnown RBP15.49■□□□□ 0.07
ACTN4-204ENST00000440400 NAA16Q6N069 864 aaPredicted RBP15.49■□□□□ 0.07
ACTN4-204ENST00000440400 SGMS1Q86VZ5 419 aa15.49■□□□□ 0.07
ACTN4-204ENST00000440400 ELP1O95163 1332 aa15.49■□□□□ 0.07
ACTN4-204ENST00000440400 SH2B2O14492 632 aaPredicted RBP15.49■□□□□ 0.07
ACTN4-204ENST00000440400 PRC1O43663 620 aa15.49■□□□□ 0.07
ACTN4-204ENST00000440400 HIBADHP31937 336 aaKnown RBP15.49■□□□□ 0.07
ACTN4-204ENST00000440400 CBX1P83916 185 aa15.49■□□□□ 0.07
ACTN4-204ENST00000440400 TDRD7Q8NHU6 1098 aaKnown RBP15.49■□□□□ 0.07
ACTN4-204ENST00000440400 NSUN4Q96CB9 384 aaKnown RBP15.49■□□□□ 0.07
ACTN4-204ENST00000440400 TMEM87BQ96K49 555 aa15.49■□□□□ 0.07
ACTN4-204ENST00000440400 BRD2P25440 801 aaKnown RBP15.48■□□□□ 0.07
ACTN4-204ENST00000440400 APOBRQ0VD83 1088 aa15.48■□□□□ 0.07
ACTN4-204ENST00000440400 FLAD1Q8NFF5 587 aa15.48■□□□□ 0.07
ACTN4-204ENST00000440400 TSC1Q92574 1164 aa15.48■□□□□ 0.07
ACTN4-204ENST00000440400 NEDD4P46934 1319 aa15.48■□□□□ 0.07
ACTN4-204ENST00000440400 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
ACTN4-204ENST00000440400 NKX2-3Q8TAU0 364 aa15.48■□□□□ 0.07
ACTN4-204ENST00000440400 RBM17Q96I25 401 aaKnown RBP15.48■□□□□ 0.07
ACTN4-204ENST00000440400 ARMT1Q9H993 441 aa15.48■□□□□ 0.07
ACTN4-204ENST00000440400 RCAN1P53805 252 aa15.48■□□□□ 0.07
ACTN4-204ENST00000440400 CYB5R4Q7L1T6 521 aa15.48■□□□□ 0.07
ACTN4-204ENST00000440400 IGDCC4Q8TDY8 1250 aa15.48■□□□□ 0.07
ACTN4-204ENST00000440400 CNNM2Q9H8M5 875 aa15.48■□□□□ 0.07
ACTN4-204ENST00000440400 PRPF40AO75400 957 aaKnown RBP15.47■□□□□ 0.07
ACTN4-204ENST00000440400 BBOX1O75936 387 aa15.47■□□□□ 0.07
ACTN4-204ENST00000440400 PCP11498 1178 aaKnown RBP15.47■□□□□ 0.07
ACTN4-204ENST00000440400 NT5C2P49902 561 aa15.47■□□□□ 0.07
ACTN4-204ENST00000440400 RESTQ13127 1097 aa15.47■□□□□ 0.07
ACTN4-204ENST00000440400 IL1R1P14778 569 aa15.47■□□□□ 0.07
ACTN4-204ENST00000440400 LIFRP42702 1097 aa15.47■□□□□ 0.07
ACTN4-204ENST00000440400 LARP1BQ659C4 914 aaKnown RBP15.47■□□□□ 0.07
ACTN4-204ENST00000440400 DDX49Q9Y6V7 483 aaKnown RBP15.47■□□□□ 0.07
ACTN4-204ENST00000440400 BAZ2AQ9UIF9 1905 aaKnown RBP15.47■□□□□ 0.07
ACTN4-204ENST00000440400 CDC37L1Q7L3B6 337 aa15.46■□□□□ 0.07
ACTN4-204ENST00000440400 LRP2BPQ9P2M1 347 aa15.46■□□□□ 0.07
ACTN4-204ENST00000440400 JAK2O60674 1132 aa15.46■□□□□ 0.07
ACTN4-204ENST00000440400 USP48Q86UV5 1035 aa15.46■□□□□ 0.07
ACTN4-204ENST00000440400 CHAMP1Q96JM3 812 aa15.46■□□□□ 0.07
ACTN4-204ENST00000440400 ROBO3Q96MS0 1386 aa15.46■□□□□ 0.06
ACTN4-204ENST00000440400 MAGEB6P1A0A0J9YX57 407 aa15.46■□□□□ 0.06
ACTN4-204ENST00000440400 CYP7A1P22680 504 aa15.46■□□□□ 0.06
ACTN4-204ENST00000440400 ATP2B4P23634 1241 aa15.46■□□□□ 0.06
ACTN4-204ENST00000440400 HAND2P61296 217 aa15.46■□□□□ 0.06
ACTN4-204ENST00000440400 AKNAD1Q5T1N1 836 aa15.46■□□□□ 0.06
ACTN4-204ENST00000440400 LRRC2Q9BYS8 371 aa15.46■□□□□ 0.06
ACTN4-204ENST00000440400 KRT23Q9C075 422 aa15.46■□□□□ 0.06
ACTN4-204ENST00000440400 KIF13BQ9NQT8 1826 aa15.46■□□□□ 0.06
ACTN4-204ENST00000440400 TXNRD3Q86VQ6 643 aa15.45■□□□□ 0.06
ACTN4-204ENST00000440400 NACAP1Q9BZK3 213 aa15.45■□□□□ 0.06
ACTN4-204ENST00000440400 LY9Q9HBG7 655 aa15.45■□□□□ 0.06
ACTN4-204ENST00000440400 ANGEL1Q9UNK9 670 aaKnown RBP15.45■□□□□ 0.06
ACTN4-204ENST00000440400 GPSM2P81274 684 aa15.45■□□□□ 0.06
ACTN4-204ENST00000440400 SLC4A4Q9Y6R1 1079 aa15.45■□□□□ 0.06
ACTN4-204ENST00000440400 PTPDC1A2A3K4 754 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 FDPSP14324 419 aaKnown RBP15.44■□□□□ 0.06
ACTN4-204ENST00000440400 CSPP1Q1MSJ5 1256 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 COL23A1Q86Y22 540 aaPredicted RBP15.44■□□□□ 0.06
ACTN4-204ENST00000440400 PPP1R9BQ96SB3 815 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 NAPBQ9H115 298 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 ZSCAN16Q9H4T2 348 aaPredicted RBP15.44■□□□□ 0.06
ACTN4-204ENST00000440400 RGS17Q9UGC6 210 aaPredicted RBP15.44■□□□□ 0.06
ACTN4-204ENST00000440400 PRKAB2O43741 272 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 MECOMQ03112 1051 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 ZSCAN23Q3MJ62 389 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 SBK1Q52WX2 424 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 RALYLQ86SE5 291 aaKnown RBP15.44■□□□□ 0.06
ACTN4-204ENST00000440400 NLGN1Q8N2Q7 840 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 NSFL1CQ9UNZ2 370 aaKnown RBP15.44■□□□□ 0.06
ACTN4-204ENST00000440400 CNPY2Q9Y2B0 182 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 MYH2Q9UKX2 1941 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 SNED1Q8TER0 1413 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 RXRBP28702 533 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 UBE2HP62256 183 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 STK3Q13188 491 aa15.44■□□□□ 0.06
ACTN4-204ENST00000440400 SPTY2D1Q68D10 685 aaPredicted RBP15.44■□□□□ 0.06
ACTN4-204ENST00000440400 RPGRQ92834 1020 aaKnown RBP15.44■□□□□ 0.06
ACTN4-204ENST00000440400 EP400Q96L91 3159 aa15.43■□□□□ 0.06
ACTN4-204ENST00000440400 ATL3Q6DD88 541 aa15.43■□□□□ 0.06
ACTN4-204ENST00000440400 SP8Q8IXZ3 490 aa15.43■□□□□ 0.06
ACTN4-204ENST00000440400 CCDC24Q8N4L8 307 aa15.43■□□□□ 0.06
ACTN4-204ENST00000440400 CCDC94Q9BW85 323 aaPredicted RBP15.43■□□□□ 0.06
ACTN4-204ENST00000440400 MKRN1Q9UHC7 482 aaKnown RBP15.43■□□□□ 0.06
ACTN4-204ENST00000440400 PSME4Q14997 1843 aa15.43■□□□□ 0.06
ACTN4-204ENST00000440400 STK36Q9NRP7 1315 aa15.43■□□□□ 0.06
ACTN4-204ENST00000440400 TERF1P54274 439 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms