RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 ZKSCAN3Q9BRR0 538 aa20.17■□□□□ 0.82
SEMA3B-204ENST00000433753 ARMT1Q9H993 441 aa20.17■□□□□ 0.82
SEMA3B-204ENST00000433753 MYH7P12883 1935 aa20.17■□□□□ 0.82
SEMA3B-204ENST00000433753 TTF1Q15361 905 aaPredicted RBP20.17■□□□□ 0.82
SEMA3B-204ENST00000433753 UBE3CQ15386 1083 aa20.17■□□□□ 0.82
SEMA3B-204ENST00000433753 ZRSR1Q15695 479 aaKnown RBP20.17■□□□□ 0.82
SEMA3B-204ENST00000433753 NBPF11Q86T75 865 aa20.17■□□□□ 0.82
SEMA3B-204ENST00000433753 CCDC82Q8N4S0 544 aa20.17■□□□□ 0.82
SEMA3B-204ENST00000433753 IGDCC4Q8TDY8 1250 aa20.17■□□□□ 0.82
SEMA3B-204ENST00000433753 EPB41L4AQ9HCS5 686 aaPredicted RBP20.17■□□□□ 0.82
SEMA3B-204ENST00000433753 ZMYM6O95789 1325 aa20.17■□□□□ 0.82
SEMA3B-204ENST00000433753 RANBP6O60518 1105 aaKnown RBP20.16■□□□□ 0.82
SEMA3B-204ENST00000433753 ZSWIM5Q9P217 1185 aa20.16■□□□□ 0.82
SEMA3B-204ENST00000433753 MBD4O95243 580 aa20.16■□□□□ 0.82
SEMA3B-204ENST00000433753 GNL2Q13823 731 aaKnown RBP20.16■□□□□ 0.82
SEMA3B-204ENST00000433753 RASGRF1Q13972 1273 aa20.16■□□□□ 0.82
SEMA3B-204ENST00000433753 TMEM67Q5HYA8 995 aa20.15■□□□□ 0.82
SEMA3B-204ENST00000433753 RRP12Q5JTH9 1297 aaKnown RBP20.15■□□□□ 0.82
SEMA3B-204ENST00000433753 CMTR1Q8N1G2 835 aaKnown RBP20.15■□□□□ 0.82
SEMA3B-204ENST00000433753 SPATA5Q8NB90 893 aa20.15■□□□□ 0.82
SEMA3B-204ENST00000433753 NAT10Q9H0A0 1025 aaKnown RBP20.15■□□□□ 0.82
SEMA3B-204ENST00000433753 FAM217BQ9NTX9 383 aaPredicted RBP20.15■□□□□ 0.82
SEMA3B-204ENST00000433753 ABCC12Q96J65 1359 aa20.15■□□□□ 0.82
SEMA3B-204ENST00000433753 LY9Q9HBG7 655 aa20.15■□□□□ 0.82
SEMA3B-204ENST00000433753 ZBTB43O43298 467 aa20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 SMC2O95347 1197 aa20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 ARID4AP29374 1257 aaPredicted RBP20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 CCZ1BP86790 482 aa20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 CCZ1P86791 482 aaPredicted RBP20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 SLC39A14Q15043 492 aa20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 PUM3Q15397 648 aaKnown RBP20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 SUSD4Q5VX71 490 aa20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 IFNL3Q8IZI9 196 aa20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 TOMM22Q9NS69 142 aa20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 IFNKQ9P0W0 207 aa20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 IQSEC3Q9UPP2 1182 aaPredicted RBP20.14■□□□□ 0.82
SEMA3B-204ENST00000433753 SPECC1Q5M775 1068 aa20.14■□□□□ 0.81
SEMA3B-204ENST00000433753 PPP4R3BQ5MIZ7 849 aa20.14■□□□□ 0.81
SEMA3B-204ENST00000433753 LPIN2Q92539 896 aa20.14■□□□□ 0.81
SEMA3B-204ENST00000433753 ZNF512BQ96KM6 892 aaPredicted RBP20.14■□□□□ 0.81
SEMA3B-204ENST00000433753 XPO4Q9C0E2 1151 aaKnown RBP20.14■□□□□ 0.81
SEMA3B-204ENST00000433753 GUCY1A2P33402 732 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 BCAMP50895 628 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 NTRK3Q16288 839 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 SHC4Q6S5L8 630 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 ITGB4P16144 1822 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 GOLGA8AA7E2F4 631 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 FGFR2P21802 821 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 CMA1P23946 247 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 IARSP41252 1262 aaKnown RBP20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 SLC26A6Q9BXS9 759 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 NAPBQ9H115 298 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 BCL9O00512 1426 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 WDR19Q8NEZ3 1342 aa20.13■□□□□ 0.81
SEMA3B-204ENST00000433753 IFIT3O14879 490 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 LMOD1P29536 600 aaPredicted RBP20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 PTPN21Q16825 1174 aa20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 MIGA1Q8NAN2 632 aa20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 PRDM10Q9NQV6 1147 aa20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 ZNF34Q8IZ26 560 aa20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 CCDC94Q9BW85 323 aaPredicted RBP20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 WTIPA6NIX2 430 aaPredicted RBP20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 SMIM22K7EJ46 135 aa20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 CTIFO43310 598 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 SYKP43405 635 aa20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 PNOCQ13519 176 aa20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 MPHOSPH8Q99549 860 aa20.12■□□□□ 0.81
SEMA3B-204ENST00000433753 C4AP0C0L4 1744 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 C4BP0C0L5 1744 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 ABCA3Q99758 1704 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 PATL2C9JE40 543 aaKnown RBP20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 EXOC5O00471 708 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 UQCRFS1P1P0C7P4 283 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 ATP1A3P13637 1013 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 CBX1P83916 185 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 CEP135Q66GS9 1140 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 NLRP12P59046 1061 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 RBM6P78332 1123 aaKnown RBP20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 NCAPHQ15003 741 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 PTPAQ15257 358 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 TMC6Q7Z403 805 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 LCORLQ8N3X6 602 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 ACSBG1Q96GR2 724 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 KCNJ14Q9UNX9 436 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 SLIT2O94813 1529 aa20.11■□□□□ 0.81
SEMA3B-204ENST00000433753 SPDYE4A6NLX3 237 aa20.1■□□□□ 0.81
SEMA3B-204ENST00000433753 GSG1L2A8MUP6 293 aa20.1■□□□□ 0.81
SEMA3B-204ENST00000433753 PDCL2Q8N4E4 241 aa20.1■□□□□ 0.81
SEMA3B-204ENST00000433753 MAP3K14Q99558 947 aa20.1■□□□□ 0.81
SEMA3B-204ENST00000433753 SLC12A7Q9Y666 1083 aa20.1■□□□□ 0.81
SEMA3B-204ENST00000433753 NUP98P52948 1817 aa20.1■□□□□ 0.81
SEMA3B-204ENST00000433753 TMEM87BQ96K49 555 aa20.1■□□□□ 0.81
SEMA3B-204ENST00000433753 SMTNL1A8MU46 457 aa20.09■□□□□ 0.81
SEMA3B-204ENST00000433753 CDKL5O76039 1030 aa20.09■□□□□ 0.81
SEMA3B-204ENST00000433753 SLC5A1P13866 664 aa20.09■□□□□ 0.81
SEMA3B-204ENST00000433753 NCBP1Q09161 790 aaKnown RBP20.09■□□□□ 0.81
SEMA3B-204ENST00000433753 MAP3K12Q12852 859 aa20.09■□□□□ 0.81
SEMA3B-204ENST00000433753 CPLX2Q6PUV4 134 aaKnown RBP20.09■□□□□ 0.81
SEMA3B-204ENST00000433753 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms