RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 NAPBQ9H115 298 aa15.83■□□□□ 0.13
TMEM50B-201ENST00000420455 MTA3Q9BTC8 594 aa15.83■□□□□ 0.12
TMEM50B-201ENST00000420455 GZF1Q9H116 711 aaPredicted RBP15.83■□□□□ 0.12
TMEM50B-201ENST00000420455 PDIA4P13667 645 aaKnown RBP15.83■□□□□ 0.12
TMEM50B-201ENST00000420455 CCDC83Q8IWF9 413 aa15.83■□□□□ 0.12
TMEM50B-201ENST00000420455 NKX2-3Q8TAU0 364 aa15.83■□□□□ 0.12
TMEM50B-201ENST00000420455 MKRN1Q9UHC7 482 aaKnown RBP15.83■□□□□ 0.12
TMEM50B-201ENST00000420455 SUGT1Q9Y2Z0 365 aa15.83■□□□□ 0.12
TMEM50B-201ENST00000420455 DTNBO60941 627 aa15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 LDHBP07195 334 aaKnown RBP15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 CHAF1AQ13111 956 aaPredicted RBP15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 TBC1D22AQ8WUA7 517 aa15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 CNKSR1Q969H4 720 aa15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 LMBRD1Q9NUN5 540 aa15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 APPP05067 770 aa15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 DYNLL1P63167 89 aaKnown RBP15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 GSTO1P78417 241 aa15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 GRIK5Q16478 980 aa15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 MCTP1Q6DN14 999 aa15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 BRF1Q92994 677 aa15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 LLPHQ9BRT6 129 aaKnown RBP15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 PSME4Q14997 1843 aa15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 NEDD4P46934 1319 aa15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 BAZ2AQ9UIF9 1905 aaKnown RBP15.82■□□□□ 0.12
TMEM50B-201ENST00000420455 FSD2A1L4K1 749 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 AKNAD1Q5T1N1 836 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 CERS3Q8IU89 383 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 CNNM2Q9H8M5 875 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 SBK1Q52WX2 424 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 FOXD4L5Q5VV16 416 aaPredicted RBP15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 DPP8Q6V1X1 898 aaPredicted RBP15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 SMARCC2Q8TAQ2 1214 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 FOXD4L4Q8WXT5 416 aaPredicted RBP15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 ATP8A2Q9NTI2 1148 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 NAV1Q8NEY1 1877 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 NID2Q14112 1375 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 PRC1O43663 620 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 PCP11498 1178 aaKnown RBP15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 OLFM4Q6UX06 510 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 NECAB1Q8N987 351 aa15.81■□□□□ 0.12
TMEM50B-201ENST00000420455 GAKO14976 1311 aa15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 CC2D2BQ6DHV5 1058 aa15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 CYB5R4Q7L1T6 521 aa15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 SMC3Q9UQE7 1217 aa15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 BRCA1P38398 1863 aaKnown RBP15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 MROH7-TTC4A0A0A0MT08 1334 aa15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 C6orf229H3BNL8 230 aa15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 PDIA3P30101 505 aaKnown RBP15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 PPARAQ07869 468 aa15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 SCRN1Q12765 414 aa15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 GRIPAP1Q4V328 841 aa15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 SDR42E1Q8WUS8 393 aa15.8■□□□□ 0.12
TMEM50B-201ENST00000420455 GJB2P29033 226 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 FKBP1AP62942 108 aaKnown RBP15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 DZIP1Q86YF9 867 aaKnown RBP15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 IGDCC4Q8TDY8 1250 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 TMEM87BQ96K49 555 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 EYA3Q99504 573 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 LRRC2Q9BYS8 371 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 KRT23Q9C075 422 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 GPR75-ASB3A0A0A6YYF3 556 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 SH2B2O14492 632 aaPredicted RBP15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 KCNA3P22001 575 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 CHRNA5P30532 468 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 TDO2P48775 406 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 CTR9Q6PD62 1173 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 RALYLQ86SE5 291 aaKnown RBP15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 ZNF622Q969S3 477 aaKnown RBP eCLIP15.79■□□□□ 0.125e-7■□□□□ 9.6
TMEM50B-201ENST00000420455 CRNKL1Q9BZJ0 848 aaKnown RBP15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 DCP1AQ9NPI6 582 aaPredicted RBP15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 WDR33Q9C0J8 1336 aaKnown RBP15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 SYT1P21579 422 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 CTDSPL2Q05D32 466 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 APOBRQ0VD83 1088 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 TRDNQ13061 729 aa15.79■□□□□ 0.12
TMEM50B-201ENST00000420455 ROBO3Q96MS0 1386 aa15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 LDHCP07864 332 aa15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 NT5C2P49902 561 aa15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 SGMS1Q86VZ5 419 aa15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 CHMP4CQ96CF2 233 aa15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 AATFQ9NY61 560 aaKnown RBP eCLIP15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 HPS5Q9UPZ3 1129 aa15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 CTDNEP1O95476 244 aa15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 PTMSP20962 102 aa15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 LIFRP42702 1097 aa15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 KLHL40Q2TBA0 621 aa15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 ZC3H12CQ9C0D7 883 aaKnown RBP15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 RNF41Q9H4P4 317 aaPredicted RBP15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 BRPF3Q9ULD4 1205 aa15.78■□□□□ 0.12
TMEM50B-201ENST00000420455 MFSD6Q6ZSS7 791 aa15.77■□□□□ 0.12
TMEM50B-201ENST00000420455 CHST3Q7LGC8 479 aa15.77■□□□□ 0.12
TMEM50B-201ENST00000420455 ZSWIM5Q9P217 1185 aa15.77■□□□□ 0.12
TMEM50B-201ENST00000420455 JAG2Q9Y219 1238 aa15.77■□□□□ 0.12
TMEM50B-201ENST00000420455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.77■□□□□ 0.12
TMEM50B-201ENST00000420455 STX6O43752 255 aa15.77■□□□□ 0.11
TMEM50B-201ENST00000420455 SKOR2Q2VWA4 1001 aaPredicted RBP15.77■□□□□ 0.11
TMEM50B-201ENST00000420455 PODNQ7Z5L7 613 aa15.77■□□□□ 0.11
TMEM50B-201ENST00000420455 RGS22Q8NE09 1264 aa15.77■□□□□ 0.11
TMEM50B-201ENST00000420455 GPT2Q8TD30 523 aa15.77■□□□□ 0.11
TMEM50B-201ENST00000420455 ANGEL1Q9UNK9 670 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms