RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 MROH7-TTC4A0A0A0MT08 1334 aa17.35■□□□□ 0.37
TTC39A-208ENST00000413473 PDE8BO95263 885 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 CCDC102BQ68D86 513 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 APOA5Q6Q788 366 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 INCENPQ9NQS7 918 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 IMPACTQ9P2X3 320 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 TRMT112Q9UI30 125 aaKnown RBP17.34■□□□□ 0.37
TTC39A-208ENST00000413473 WWC3Q9ULE0 1092 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 PDE6AP16499 860 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 NCAPHQ15003 741 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
TTC39A-208ENST00000413473 SHANK3Q9BYB0 1731 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 CDKL5O76039 1030 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 SYKP43405 635 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 GNL2Q13823 731 aaKnown RBP17.34■□□□□ 0.37
TTC39A-208ENST00000413473 CPLX2Q6PUV4 134 aaKnown RBP17.34■□□□□ 0.37
TTC39A-208ENST00000413473 TMC6Q7Z403 805 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 PKNOX2Q96KN3 472 aa17.34■□□□□ 0.37
TTC39A-208ENST00000413473 MYO5AQ9Y4I1 1855 aaKnown RBP17.33■□□□□ 0.37
TTC39A-208ENST00000413473 HSPA2P54652 639 aa17.33■□□□□ 0.36
TTC39A-208ENST00000413473 IGDCC4Q8TDY8 1250 aa17.33■□□□□ 0.36
TTC39A-208ENST00000413473 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.36
TTC39A-208ENST00000413473 ZBTB43O43298 467 aa17.33■□□□□ 0.36
TTC39A-208ENST00000413473 TPM4P67936 248 aa17.33■□□□□ 0.36
TTC39A-208ENST00000413473 NFXL1Q6ZNB6 911 aa17.33■□□□□ 0.36
TTC39A-208ENST00000413473 HELBQ8NG08 1087 aaPredicted RBP17.33■□□□□ 0.36
TTC39A-208ENST00000413473 STRBPQ96SI9 672 aaKnown RBP17.33■□□□□ 0.36
TTC39A-208ENST00000413473 MYL10Q9BUA6 226 aa17.33■□□□□ 0.36
TTC39A-208ENST00000413473 LMOD1P29536 600 aaPredicted RBP17.32■□□□□ 0.36
TTC39A-208ENST00000413473 ARMCX5Q6P1M9 558 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 SHC4Q6S5L8 630 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 RGS22Q8NE09 1264 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 AIDAQ96BJ3 306 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 C4AP0C0L4 1744 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 C4BP0C0L5 1744 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 DDX60Q8IY21 1712 aaKnown RBP17.32■□□□□ 0.36
TTC39A-208ENST00000413473 IARSP41252 1262 aaKnown RBP17.32■□□□□ 0.36
TTC39A-208ENST00000413473 PTPAQ15257 358 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 NTRK3Q16288 839 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 TMEM87BQ96K49 555 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 TIGD1Q96MW7 591 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 SLAIN2Q9P270 581 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 TOGARAM1Q9Y4F4 1720 aa17.32■□□□□ 0.36
TTC39A-208ENST00000413473 TCRBV5S4A2TA0A5A2 114 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 PPP6R2O75170 966 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 JMYQ8N9B5 988 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 CLIC6Q96NY7 704 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 KCND1Q9NSA2 647 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 HPSEQ9Y251 543 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 UBE2Q2LH0YL09 131 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 ARID4AP29374 1257 aaPredicted RBP17.31■□□□□ 0.36
TTC39A-208ENST00000413473 TMEM67Q5HYA8 995 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 SLC4A9Q96Q91 983 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 MAP3K14Q99558 947 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 LY9Q9HBG7 655 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 FAM217BQ9NTX9 383 aaPredicted RBP17.31■□□□□ 0.36
TTC39A-208ENST00000413473 ATRNO75882 1429 aa17.31■□□□□ 0.36
TTC39A-208ENST00000413473 GOLGA8AA7E2F4 631 aa17.3■□□□□ 0.36
TTC39A-208ENST00000413473 RANBP6O60518 1105 aaKnown RBP17.3■□□□□ 0.36
TTC39A-208ENST00000413473 PDE8AO60658 829 aa17.3■□□□□ 0.36
TTC39A-208ENST00000413473 UQCRFS1P1P0C7P4 283 aa17.3■□□□□ 0.36
TTC39A-208ENST00000413473 ATP1A3P13637 1013 aa17.3■□□□□ 0.36
TTC39A-208ENST00000413473 ZSCAN20P17040 1043 aaPredicted RBP17.3■□□□□ 0.36
TTC39A-208ENST00000413473 E4F1Q66K89 784 aaPredicted RBP17.3■□□□□ 0.36
TTC39A-208ENST00000413473 KIF18AQ8NI77 898 aa17.3■□□□□ 0.36
TTC39A-208ENST00000413473 TUBE1Q9UJT0 475 aa17.3■□□□□ 0.36
TTC39A-208ENST00000413473 ZNF215Q9UL58 517 aaPredicted RBP17.3■□□□□ 0.36
TTC39A-208ENST00000413473 ZBTB1Q9Y2K1 713 aa17.3■□□□□ 0.36
TTC39A-208ENST00000413473 CYP19A1P11511 503 aaPredicted RBP17.3■□□□□ 0.36
TTC39A-208ENST00000413473 SFPQP23246 707 aaKnown RBP eCLIP17.3■□□□□ 0.36
TTC39A-208ENST00000413473 FANCCQ00597 558 aa17.3■□□□□ 0.36
TTC39A-208ENST00000413473 CCDC150Q8NCX0 1101 aa17.3■□□□□ 0.36
TTC39A-208ENST00000413473 PRDM4Q9UKN5 801 aa17.3■□□□□ 0.36
TTC39A-208ENST00000413473 CTDSPL2Q05D32 466 aa17.29■□□□□ 0.36
TTC39A-208ENST00000413473 PNOCQ13519 176 aa17.29■□□□□ 0.36
TTC39A-208ENST00000413473 TRIM29Q14134 588 aa17.29■□□□□ 0.36
TTC39A-208ENST00000413473 SGMS1Q86VZ5 419 aa17.29■□□□□ 0.36
TTC39A-208ENST00000413473 IFNL3Q8IZI9 196 aa17.29■□□□□ 0.36
TTC39A-208ENST00000413473 LPIN2Q92539 896 aa17.29■□□□□ 0.36
TTC39A-208ENST00000413473 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.29■□□□□ 0.36
TTC39A-208ENST00000413473 HSD3B7Q9H2F3 369 aa17.29■□□□□ 0.36
TTC39A-208ENST00000413473 ZSWIM5Q9P217 1185 aa17.29■□□□□ 0.36
TTC39A-208ENST00000413473 UBN2Q6ZU65 1347 aa17.29■□□□□ 0.36
TTC39A-208ENST00000413473 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
TTC39A-208ENST00000413473 SNAP23O00161 211 aa17.29■□□□□ 0.36
TTC39A-208ENST00000413473 IKBKBO14920 756 aa17.29■□□□□ 0.36
TTC39A-208ENST00000413473 PUM3Q15397 648 aaKnown RBP17.29■□□□□ 0.36
TTC39A-208ENST00000413473 IFIT3O14879 490 aaKnown RBP17.28■□□□□ 0.36
TTC39A-208ENST00000413473 ALX1Q15699 326 aa17.28■□□□□ 0.36
TTC39A-208ENST00000413473 MAGEB6Q8N7X4 407 aa17.28■□□□□ 0.36
TTC39A-208ENST00000413473 FEZ1Q99689 392 aa17.28■□□□□ 0.36
TTC39A-208ENST00000413473 SLC26A6Q9BXS9 759 aa17.28■□□□□ 0.36
TTC39A-208ENST00000413473 EPB41L4AQ9HCS5 686 aaPredicted RBP17.28■□□□□ 0.36
TTC39A-208ENST00000413473 CGNQ9P2M7 1197 aaKnown RBP17.28■□□□□ 0.36
TTC39A-208ENST00000413473 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.28■□□□□ 0.36
TTC39A-208ENST00000413473 SLC12A7Q9Y666 1083 aa17.28■□□□□ 0.36
TTC39A-208ENST00000413473 V9GYY5 206 aaPredicted RBP17.28■□□□□ 0.36
TTC39A-208ENST00000413473 RESP18Q5W5W9 173 aa17.28■□□□□ 0.36
TTC39A-208ENST00000413473 SPATA5Q8NB90 893 aa17.28■□□□□ 0.36
TTC39A-208ENST00000413473 NAPBQ9H115 298 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms