RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 HAUS1Q96CS2 278 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 PAWRQ96IZ0 340 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 IFT74Q96LB3 600 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 GSDMAQ96QA5 445 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 MOSPD1Q9UJG1 213 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 MAFFQ9ULX9 164 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 CEP131Q9UPN4 1083 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 LZTS1Q9Y250 596 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 AP3B1O00203 1094 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 KRT14P02533 472 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 MMEP08473 750 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 DDX10Q13206 875 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 TRIM14Q14142 442 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 DDB1Q16531 1140 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 AKNAD1Q5T1N1 836 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 RBM20Q5T481 1227 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 SDE2Q6IQ49 451 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 NLRP9Q7RTR0 991 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 CHPFQ8IZ52 775 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 SH3KBP1Q96B97 665 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 OMA1Q96E52 524 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 HOOK2Q96ED9 719 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 CDHR1Q96JP9 859 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 NR1H4Q96RI1 486 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 PLIN2Q99541 437 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 XPO4Q9C0E2 1151 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 POLE3Q9NRF9 147 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 AASDHPPTQ9NRN7 309 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 POLR3EQ9NVU0 708 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 MKRN1Q9UHC7 482 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 SLC8A1P32418 973 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 CASP2P42575 452 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 TUFMP49411 452 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 TAF12Q16514 161 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 TNNI3KQ59H18 835 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 ODF2Q5BJF6 829 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 SLC44A2Q8IWA5 706 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 B4GALNT2Q8NHY0 566 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 GOLGA1Q92805 767 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 GBP5Q96PP8 586 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 PRKRIP1Q9H875 184 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 ZNF304Q9HCX3 659 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 PCSK1NQ9UHG2 260 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 CAPN7Q9Y6W3 813 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 CCNCP24863 283 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 PCK1P35558 622 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 ADCY2Q08462 1091 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 CEP85LQ5SZL2 805 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 EFHD1Q9BUP0 239 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 DDX21Q9NR30 783 aaKnown RBP eCLIP5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 PDRG1Q9NUG6 133 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 DSEQ9UL01 958 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 PCP4L1A6NKN8 68 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 TTLL13PA6NNM8 815 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 MTRF1O75570 445 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 PRR29P0C7W0 189 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 MYCLP1P12525 358 aaPredicted RBP5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 LMOD1P29536 600 aaPredicted RBP5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 PPP1R7Q15435 360 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 NXNQ6DKJ4 435 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 NEK10Q6ZWH5 1172 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 RAPH1Q70E73 1250 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 PASD1Q8IV76 773 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 SNRNP27Q8WVK2 155 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 RUNDC3BQ96NL0 473 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 CD248Q9HCU0 757 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 COG6Q9Y2V7 657 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 B4DLN1 442 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 ZSCAN12O43309 604 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 APOEP02649 317 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 SSBP05455 408 aaKnown RBP eCLIP5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 RRP1P56182 461 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 SNX1Q13596 522 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 ARHGAP44Q17R89 818 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 C6orf163Q5TEZ5 329 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 IQCEQ6IPM2 695 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 CTAGE6Q86UF2 777 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 CPLX3Q8WVH0 158 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 TCP11Q8WWU5 503 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 GTF3C6Q969F1 213 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 SPAG5Q96R06 1193 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 SELENOOQ9BVL4 669 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 KCTD5Q9NXV2 234 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 KLF15Q9UIH9 416 aa5.87□□□□□ -1.47
R3HDM1-204ENST00000410054 ROCK2O75116 1388 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 IL16Q14005 1332 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 NACADO15069 1562 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 MYO1CO00159 1063 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 P4HA2O15460 535 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 REC8O95072 547 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 CLUP10909 449 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 PDE4DQ08499 809 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 PICALMQ13492 652 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 CCNG2Q16589 344 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 ALKBH2Q6NS38 261 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 RALYLQ86SE5 291 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 CNDP2Q96KP4 475 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 C16orf45Q96MC5 204 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 SH2D4AQ9H788 454 aa5.86□□□□□ -1.47
R3HDM1-204ENST00000410054 SPATA7Q9P0W8 599 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms