RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 EVCP57679 992 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 ME3Q16798 604 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 GRIPAP1Q4V328 841 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 EYA3Q99504 573 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 KCNA3P22001 575 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 HAND2P61296 217 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 GSTO1P78417 241 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 GRIK5Q16478 980 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 Q6ZUG5 572 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 NOL8Q76FK4 1167 aaKnown RBP6.54□□□□□ -1.36
EPHA4-202ENST00000409854 NCOA7Q8NI08 942 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 NACAP1Q9BZK3 213 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 MTFR1LQ9H019 292 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 NAPBQ9H115 298 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 FOXD4L1Q9NU39 408 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 SUGT1Q9Y2Z0 365 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 MROH7-TTC4A0A0A0MT08 1334 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 GAKO14976 1311 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 ANTXR2P58335 489 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 PPP4CP60510 307 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 DYNLL1P63167 89 aaKnown RBP6.53□□□□□ -1.36
EPHA4-202ENST00000409854 CLEC17AQ6ZS10 378 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 DZIP1Q86YF9 867 aaKnown RBP6.53□□□□□ -1.36
EPHA4-202ENST00000409854 STAG1Q8WVM7 1258 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 UPF1Q92900 1129 aaKnown RBP eCLIP6.53□□□□□ -1.36
EPHA4-202ENST00000409854 FAM163AQ96GL9 167 aaPredicted RBP6.53□□□□□ -1.36
EPHA4-202ENST00000409854 TMX4Q9H1E5 349 aaPredicted RBP6.53□□□□□ -1.36
EPHA4-202ENST00000409854 SIPA1L1O43166 1804 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 APPP05067 770 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 DEKP35659 375 aaKnown RBP6.53□□□□□ -1.36
EPHA4-202ENST00000409854 FKBP1AP62942 108 aaKnown RBP6.53□□□□□ -1.36
EPHA4-202ENST00000409854 NUCB2P80303 420 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 NFKBIBQ15653 356 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 CERS3Q8IU89 383 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 TCEANC2Q96MN5 208 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 SGIP1Q9BQI5 828 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 ZC3H12CQ9C0D7 883 aaKnown RBP6.53□□□□□ -1.36
EPHA4-202ENST00000409854 TACC3Q9Y6A5 838 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 NEDD4P46934 1319 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 TCHHQ07283 1943 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 FGRP09769 529 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 MCM5P33992 734 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 ATP8A2Q9NTI2 1148 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 MKRN1Q9UHC7 482 aaKnown RBP6.53□□□□□ -1.36
EPHA4-202ENST00000409854 JAG2Q9Y219 1238 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.53□□□□□ -1.36
EPHA4-202ENST00000409854 COL4A5P29400 1685 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 ROBO3Q96MS0 1386 aa6.53□□□□□ -1.36
EPHA4-202ENST00000409854 MYH6P13533 1939 aa6.52□□□□□ -1.36
EPHA4-202ENST00000409854 LDHCP07864 332 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 TDO2P48775 406 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 TGFB2P61812 414 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 SBK1Q52WX2 424 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 MFSD14BQ5SR56 506 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 AKNAD1Q5T1N1 836 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 PODNQ7Z5L7 613 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 SDR42E1Q8WUS8 393 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 GTF3C6Q969F1 213 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 MTA3Q9BTC8 594 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 CRNKL1Q9BZJ0 848 aaKnown RBP6.52□□□□□ -1.37
EPHA4-202ENST00000409854 CNNM2Q9H8M5 875 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 AATFQ9NY61 560 aaKnown RBP eCLIP6.52□□□□□ -1.37
EPHA4-202ENST00000409854 GREB1LQ9C091 1923 aaPredicted RBP6.52□□□□□ -1.37
EPHA4-202ENST00000409854 DICER1Q9UPY3 1922 aaKnown RBP6.52□□□□□ -1.37
EPHA4-202ENST00000409854 GPR75-ASB3A0A0A6YYF3 556 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 RIMBP2O15034 1052 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 PFKFB2O60825 505 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 PCP11498 1178 aaKnown RBP6.52□□□□□ -1.37
EPHA4-202ENST00000409854 PPARAQ07869 468 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 TTLL6Q8N841 843 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 SUPT20HQ8NEM7 779 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 NKX2-3Q8TAU0 364 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 TNPO1Q92973 898 aaKnown RBP6.52□□□□□ -1.37
EPHA4-202ENST00000409854 BRF1Q92994 677 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 ZNF274Q96GC6 653 aaPredicted RBP6.52□□□□□ -1.37
EPHA4-202ENST00000409854 LARP6Q9BRS8 491 aaKnown RBP6.52□□□□□ -1.37
EPHA4-202ENST00000409854 DCP1AQ9NPI6 582 aaPredicted RBP6.52□□□□□ -1.37
EPHA4-202ENST00000409854 ZDHHC9Q9Y397 364 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 NID2Q14112 1375 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 PRC1O43663 620 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 DPEP1P16444 411 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 CTDSPL2Q05D32 466 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 KIAA2012Q0VF49 1180 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 CYB5R4Q7L1T6 521 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 RALYLQ86SE5 291 aaKnown RBP6.52□□□□□ -1.37
EPHA4-202ENST00000409854 CCDC83Q8IWF9 413 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 CERS5Q8N5B7 392 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 PSMD1Q99460 953 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 KRT23Q9C075 422 aa6.52□□□□□ -1.37
EPHA4-202ENST00000409854 BRD1O95696 1058 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 GTF2IP78347 998 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 TRDNQ13061 729 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 PKP1Q13835 747 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 DIXDC1Q155Q3 683 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 CCDC93Q567U6 631 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 CTR9Q6PD62 1173 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 SLF2Q8IX21 1173 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 TMEM87BQ96K49 555 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 LRRC2Q9BYS8 371 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 ARPP21Q9UBL0 812 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms