RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 DHX16O60231 1041 aaKnown RBP16.09■□□□□ 0.17
APOB-202ENST00000399256 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
APOB-202ENST00000399256 GPR161Q8N6U8 529 aaKnown RBP16.09■□□□□ 0.17
APOB-202ENST00000399256 MPHOSPH8Q99549 860 aa16.09■□□□□ 0.17
APOB-202ENST00000399256 BAG1Q99933 345 aaPredicted RBP16.09■□□□□ 0.17
APOB-202ENST00000399256 PARD6BQ9BYG5 372 aa16.09■□□□□ 0.17
APOB-202ENST00000399256 FEZ2Q9UHY8 353 aaPredicted RBP16.09■□□□□ 0.17
APOB-202ENST00000399256 MAP3K9P80192 1104 aa16.09■□□□□ 0.17
APOB-202ENST00000399256 FCHSD1Q86WN1 690 aa16.09■□□□□ 0.17
APOB-202ENST00000399256 ATP8B1O43520 1251 aa16.08■□□□□ 0.17
APOB-202ENST00000399256 ADKP55263 362 aaKnown RBP16.08■□□□□ 0.17
APOB-202ENST00000399256 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.17
APOB-202ENST00000399256 PDE4BQ07343 736 aa16.08■□□□□ 0.17
APOB-202ENST00000399256 WASHC4Q2M389 1173 aa16.08■□□□□ 0.17
APOB-202ENST00000399256 DESI2Q9BSY9 194 aa16.08■□□□□ 0.17
APOB-202ENST00000399256 ZSWIM4Q9H7M6 989 aa16.08■□□□□ 0.17
APOB-202ENST00000399256 ARFGAP3Q9NP61 516 aa16.08■□□□□ 0.17
APOB-202ENST00000399256 MRFAP1Q9Y605 127 aa16.08■□□□□ 0.17
APOB-202ENST00000399256 KARSQ15046 597 aaKnown RBP16.08■□□□□ 0.16
APOB-202ENST00000399256 ZNF594Q96JF6 807 aaPredicted RBP16.08■□□□□ 0.16
APOB-202ENST00000399256 SIPA1L3O60292 1781 aaPredicted RBP16.08■□□□□ 0.16
APOB-202ENST00000399256 CDC27P30260 824 aa16.08■□□□□ 0.16
APOB-202ENST00000399256 ANTXR2P58335 489 aa16.08■□□□□ 0.16
APOB-202ENST00000399256 IMMTQ16891 758 aaKnown RBP16.08■□□□□ 0.16
APOB-202ENST00000399256 LRRC24Q50LG9 513 aa16.08■□□□□ 0.16
APOB-202ENST00000399256 LRP10Q7Z4F1 713 aa16.08■□□□□ 0.16
APOB-202ENST00000399256 METTL16Q86W50 562 aaKnown RBP16.08■□□□□ 0.16
APOB-202ENST00000399256 DHX58Q96C10 678 aa16.08■□□□□ 0.16
APOB-202ENST00000399256 AXIN2Q9Y2T1 843 aa16.08■□□□□ 0.16
APOB-202ENST00000399256 ROBO1Q9Y6N7 1651 aa16.07■□□□□ 0.16
APOB-202ENST00000399256 FOXP2O15409 715 aa16.07■□□□□ 0.16
APOB-202ENST00000399256 SLC52A2Q9HAB3 445 aa16.07■□□□□ 0.16
APOB-202ENST00000399256 HPSEQ9Y251 543 aa16.07■□□□□ 0.16
APOB-202ENST00000399256 AFDNP55196 1824 aaKnown RBP16.07■□□□□ 0.16
APOB-202ENST00000399256 FOXN1O15353 648 aa16.07■□□□□ 0.16
APOB-202ENST00000399256 RXRAP19793 462 aa16.07■□□□□ 0.16
APOB-202ENST00000399256 CASP7P55210 303 aa16.07■□□□□ 0.16
APOB-202ENST00000399256 SLC20A2Q08357 652 aa16.07■□□□□ 0.16
APOB-202ENST00000399256 GPS2Q13227 327 aa16.07■□□□□ 0.16
APOB-202ENST00000399256 LONRF3Q496Y0 759 aa16.07■□□□□ 0.16
APOB-202ENST00000399256 RSRC2Q7L4I2 434 aaKnown RBP16.07■□□□□ 0.16
APOB-202ENST00000399256 FOXP4Q8IVH2 680 aaPredicted RBP16.07■□□□□ 0.16
APOB-202ENST00000399256 MB21D2Q8IYB1 491 aaPredicted RBP16.07■□□□□ 0.16
APOB-202ENST00000399256 VPS37DQ86XT2 251 aa16.06■□□□□ 0.16
APOB-202ENST00000399256 KIFC2Q96AC6 838 aa16.06■□□□□ 0.16
APOB-202ENST00000399256 ALG1Q9BT22 464 aa16.06■□□□□ 0.16
APOB-202ENST00000399256 FUT8Q9BYC5 575 aa16.06■□□□□ 0.16
APOB-202ENST00000399256 PCDHA5Q9Y5H7 936 aa16.06■□□□□ 0.16
APOB-202ENST00000399256 FGAP02671 866 aa16.06■□□□□ 0.16
APOB-202ENST00000399256 FOXO4P98177 505 aa16.06■□□□□ 0.16
APOB-202ENST00000399256 ZSCAN26Q16670 478 aa16.06■□□□□ 0.16
APOB-202ENST00000399256 RALYLQ86SE5 291 aaKnown RBP16.06■□□□□ 0.16
APOB-202ENST00000399256 FBXL16Q8N461 479 aa16.06■□□□□ 0.16
APOB-202ENST00000399256 A0A1B0GUL7 405 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 BMP6P22004 513 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 SPECC1Q5M775 1068 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 CCDC191Q8NCU4 936 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 CNNM3Q8NE01 707 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 CABLES1Q8TDN4 633 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 H3BQF6 201 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 TC2NQ8N9U0 490 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 CCDC12Q8WUD4 166 aaPredicted RBP16.05■□□□□ 0.16
APOB-202ENST00000399256 GOLGA1Q92805 767 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 IRX2Q9BZI1 471 aaPredicted RBP16.05■□□□□ 0.16
APOB-202ENST00000399256 LMAN1P49257 510 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 TBX2Q13207 712 aaPredicted RBP16.05■□□□□ 0.16
APOB-202ENST00000399256 PTPAQ15257 358 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 MUM1L1Q5H9M0 696 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 DENND2AQ9ULE3 1009 aa16.05■□□□□ 0.16
APOB-202ENST00000399256 COL18A1P39060 1754 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 ZC3H6P61129 1189 aaKnown RBP16.04■□□□□ 0.16
APOB-202ENST00000399256 MTF1Q14872 753 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 LONRF2Q1L5Z9 754 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 RESP18Q5W5W9 173 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 KRT40Q6A162 431 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 TRMT44Q8IYL2 757 aaKnown RBP16.04■□□□□ 0.16
APOB-202ENST00000399256 JMYQ8N9B5 988 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 NCOA7Q8NI08 942 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 RABGGTAQ92696 567 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 PHKBQ93100 1093 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 TSPYL1Q9H0U9 437 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 ABCA3Q99758 1704 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 GOLGA6L9A6NEM1 432 aa16.04■□□□□ 0.16
APOB-202ENST00000399256 ZFP91Q96JP5 570 aaPredicted RBP16.04■□□□□ 0.16
APOB-202ENST00000399256 PPP6R2O75170 966 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 CCDC102BQ68D86 513 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 PUS3Q9BZE2 481 aaKnown RBP16.03■□□□□ 0.16
APOB-202ENST00000399256 LCMT1Q9UIC8 334 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 NWD2Q9ULI1 1742 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 KDM6AO15550 1401 aaPredicted RBP16.03■□□□□ 0.16
APOB-202ENST00000399256 STX10O60499 249 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 SNRPA1P09661 255 aaKnown RBP16.03■□□□□ 0.16
APOB-202ENST00000399256 IL15P40933 162 aaPredicted RBP16.03■□□□□ 0.16
APOB-202ENST00000399256 ZNF827Q17R98 1081 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 TTC5Q8N0Z6 440 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 MRPL44Q9H9J2 332 aaKnown RBP16.03■□□□□ 0.16
APOB-202ENST00000399256 ADAM21Q9UKJ8 722 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 KCNH3Q9ULD8 1083 aa16.03■□□□□ 0.16
APOB-202ENST00000399256 TXLNAP40222 546 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms