RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 ZNF532Q9HCE3 1301 aa15.17■□□□□ 0.02
PRAME-201ENST00000398741 IRS4O14654 1257 aaPredicted RBP15.17■□□□□ 0.02
PRAME-201ENST00000398741 NRDCO43847 1150 aa15.17■□□□□ 0.02
PRAME-201ENST00000398741 RXRAP19793 462 aa15.17■□□□□ 0.02
PRAME-201ENST00000398741 TRIM29Q14134 588 aa15.17■□□□□ 0.02
PRAME-201ENST00000398741 TMC6Q7Z403 805 aa15.17■□□□□ 0.02
PRAME-201ENST00000398741 VPS37DQ86XT2 251 aa15.17■□□□□ 0.02
PRAME-201ENST00000398741 CCDC150Q8NCX0 1101 aa15.17■□□□□ 0.02
PRAME-201ENST00000398741 PIGBQ92521 554 aa15.17■□□□□ 0.02
PRAME-201ENST00000398741 PKNOX2Q96KN3 472 aa15.17■□□□□ 0.02
PRAME-201ENST00000398741 XPO4Q9C0E2 1151 aaKnown RBP15.17■□□□□ 0.02
PRAME-201ENST00000398741 PIH1D3Q9NQM4 214 aaKnown RBP15.17■□□□□ 0.02
PRAME-201ENST00000398741 BTG4Q9NY30 223 aa15.17■□□□□ 0.02
PRAME-201ENST00000398741 DENND2AQ9ULE3 1009 aa15.17■□□□□ 0.02
PRAME-201ENST00000398741 NEDD4P46934 1319 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 SYKP43405 635 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 KRT40Q6A162 431 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 APOA5Q6Q788 366 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 NYAP1Q6ZVC0 841 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 NBPF11Q86T75 865 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 MICU3Q86XE3 530 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 CCAR2Q8N163 923 aaKnown RBP15.16■□□□□ 0.02
PRAME-201ENST00000398741 AIDAQ96BJ3 306 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 TMEM87BQ96K49 555 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 AIFM3Q96NN9 605 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 PRDM10Q9NQV6 1147 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 TRMT112Q9UI30 125 aaKnown RBP15.16■□□□□ 0.02
PRAME-201ENST00000398741 MROH7-TTC4A0A0A0MT08 1334 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 B4E1Z4 1266 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 ZBTB43O43298 467 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 PDE8BO95263 885 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 UQCRFS1P1P0C7P4 283 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 U2AF2P26368 475 aaKnown RBP eCLIP15.16■□□□□ 0.023e-26■□□□□ 8.5
PRAME-201ENST00000398741 DHX8Q14562 1220 aaKnown RBP15.16■□□□□ 0.02
PRAME-201ENST00000398741 TIGD1Q96MW7 591 aa15.16■□□□□ 0.02
PRAME-201ENST00000398741 GOLGA8AA7E2F4 631 aa15.15■□□□□ 0.02
PRAME-201ENST00000398741 KIF2AO00139 706 aaPredicted RBP15.15■□□□□ 0.02
PRAME-201ENST00000398741 PPP6R2O75170 966 aa15.15■□□□□ 0.02
PRAME-201ENST00000398741 WDHD1O75717 1129 aaPredicted RBP15.15■□□□□ 0.02
PRAME-201ENST00000398741 PDE6AP16499 860 aa15.15■□□□□ 0.02
PRAME-201ENST00000398741 CCDC102BQ68D86 513 aa15.15■□□□□ 0.02
PRAME-201ENST00000398741 PHKBQ93100 1093 aa15.15■□□□□ 0.02
PRAME-201ENST00000398741 CGNQ9P2M7 1197 aaKnown RBP15.15■□□□□ 0.02
PRAME-201ENST00000398741 PLCH1Q4KWH8 1693 aa15.15■□□□□ 0.02
PRAME-201ENST00000398741 SFPQP23246 707 aaKnown RBP eCLIP15.15■□□□□ 0.02
PRAME-201ENST00000398741 IARSP41252 1262 aaKnown RBP15.15■□□□□ 0.02
PRAME-201ENST00000398741 PHKA1P46020 1223 aa15.15■□□□□ 0.02
PRAME-201ENST00000398741 VGLL2Q8N8G2 317 aa15.15■□□□□ 0.02
PRAME-201ENST00000398741 KIF18AQ8NI77 898 aa15.15■□□□□ 0.02
PRAME-201ENST00000398741 KCND1Q9NSA2 647 aa15.15■□□□□ 0.02
PRAME-201ENST00000398741 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
PRAME-201ENST00000398741 ARID4AP29374 1257 aaPredicted RBP15.14■□□□□ 0.01
PRAME-201ENST00000398741 CDC27P30260 824 aa15.14■□□□□ 0.01
PRAME-201ENST00000398741 TMEM67Q5HYA8 995 aa15.14■□□□□ 0.01
PRAME-201ENST00000398741 ISM2Q6H9L7 571 aa15.14■□□□□ 0.01
PRAME-201ENST00000398741 WWC3Q9ULE0 1092 aa15.14■□□□□ 0.01
PRAME-201ENST00000398741 SHANK3Q9BYB0 1731 aa15.14■□□□□ 0.01
PRAME-201ENST00000398741 IKBKBO14920 756 aa15.13■□□□□ 0.01
PRAME-201ENST00000398741 PDE8AO60658 829 aa15.13■□□□□ 0.01
PRAME-201ENST00000398741 ADAMTS2O95450 1211 aa15.13■□□□□ 0.01
PRAME-201ENST00000398741 PUM3Q15397 648 aaKnown RBP15.13■□□□□ 0.01
PRAME-201ENST00000398741 LPIN2Q92539 896 aa15.13■□□□□ 0.01
PRAME-201ENST00000398741 FEZ1Q99689 392 aa15.13■□□□□ 0.01
PRAME-201ENST00000398741 NAPBQ9H115 298 aa15.13■□□□□ 0.01
PRAME-201ENST00000398741 C4AP0C0L4 1744 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 C4BP0C0L5 1744 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 NRAPQ86VF7 1730 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 TOGARAM1Q9Y4F4 1720 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 LMOD1P29536 600 aaPredicted RBP15.12■□□□□ 0.01
PRAME-201ENST00000398741 NCAPHQ15003 741 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 SHC4Q6S5L8 630 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 NKX2-3Q8TAU0 364 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 STRBPQ96SI9 672 aaKnown RBP15.12■□□□□ 0.01
PRAME-201ENST00000398741 LY9Q9HBG7 655 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 SENP2Q9HC62 589 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 HPSEQ9Y251 543 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 SLC12A7Q9Y666 1083 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 NUTM2BA6NNL0 878 aaPredicted RBP15.12■□□□□ 0.01
PRAME-201ENST00000398741 NUTM2EB1AL46 878 aaPredicted RBP15.12■□□□□ 0.01
PRAME-201ENST00000398741 IFIT3O14879 490 aaKnown RBP15.12■□□□□ 0.01
PRAME-201ENST00000398741 FANCCQ00597 558 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 SSRP1Q08945 709 aaKnown RBP15.12■□□□□ 0.01
PRAME-201ENST00000398741 NAA30Q147X3 362 aaPredicted RBP15.12■□□□□ 0.01
PRAME-201ENST00000398741 PTPAQ15257 358 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 ARMCX5Q6P1M9 558 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 SGMS1Q86VZ5 419 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 NUTM2AQ8IVF1 878 aaPredicted RBP15.12■□□□□ 0.01
PRAME-201ENST00000398741 IGDCC4Q8TDY8 1250 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 MYL10Q9BUA6 226 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 SLC26A6Q9BXS9 759 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 TUBE1Q9UJT0 475 aa15.12■□□□□ 0.01
PRAME-201ENST00000398741 DDX60Q8IY21 1712 aaKnown RBP15.12■□□□□ 0.01
PRAME-201ENST00000398741 TCRBV5S4A2TA0A5A2 114 aa15.11■□□□□ 0.01
PRAME-201ENST00000398741 PATL2C9JE40 543 aaKnown RBP15.11■□□□□ 0.01
PRAME-201ENST00000398741 CBFA2T2O43439 604 aa15.11■□□□□ 0.01
PRAME-201ENST00000398741 CUTAO60888 179 aa15.11■□□□□ 0.01
PRAME-201ENST00000398741 MAP3K12Q12852 859 aa15.11■□□□□ 0.01
PRAME-201ENST00000398741 ALX1Q15699 326 aa15.11■□□□□ 0.01
PRAME-201ENST00000398741 OLFM4Q6UX06 510 aa15.11■□□□□ 0.01
PRAME-201ENST00000398741 HELBQ8NG08 1087 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms