RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 KIF6Q6ZMV9 814 aa15.41■□□□□ 0.06
TRIM40-207ENST00000396581 CHST3Q7LGC8 479 aa15.41■□□□□ 0.06
TRIM40-207ENST00000396581 MB21D2Q8IYB1 491 aaPredicted RBP15.41■□□□□ 0.06
TRIM40-207ENST00000396581 SMARCC1Q92922 1105 aaPredicted RBP15.41■□□□□ 0.06
TRIM40-207ENST00000396581 GJD4Q96KN9 370 aaPredicted RBP15.41■□□□□ 0.06
TRIM40-207ENST00000396581 ZBTB1Q9Y2K1 713 aa15.41■□□□□ 0.06
TRIM40-207ENST00000396581 TJP1Q07157 1748 aa15.41■□□□□ 0.06
TRIM40-207ENST00000396581 MAP3K15Q6ZN16 1313 aa15.41■□□□□ 0.06
TRIM40-207ENST00000396581 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.4■□□□□ 0.06
TRIM40-207ENST00000396581 MYO1BO43795 1136 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 ONECUT3O60422 494 aaPredicted RBP15.4■□□□□ 0.06
TRIM40-207ENST00000396581 TIMM10P62072 90 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 ETF1P62495 437 aaKnown RBP15.4■□□□□ 0.06
TRIM40-207ENST00000396581 SF3A1Q15459 793 aaKnown RBP15.4■□□□□ 0.06
TRIM40-207ENST00000396581 ZRSR1Q15695 479 aaKnown RBP15.4■□□□□ 0.06
TRIM40-207ENST00000396581 ERCC6LQ2NKX8 1250 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 ANO1Q5XXA6 986 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 OSBP2Q969R2 916 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 HPSEQ9Y251 543 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 ZNF330Q9Y3S2 320 aaPredicted RBP15.4■□□□□ 0.06
TRIM40-207ENST00000396581 IFIT1P09914 478 aaKnown RBP15.4■□□□□ 0.06
TRIM40-207ENST00000396581 PFKFB1P16118 471 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 FANCCQ00597 558 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 KIF23Q02241 960 aaPredicted RBP15.4■□□□□ 0.06
TRIM40-207ENST00000396581 TTLL5Q6EMB2 1281 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 GIGYF2Q6Y7W6 1299 aaKnown RBP15.4■□□□□ 0.06
TRIM40-207ENST00000396581 FCHSD1Q86WN1 690 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 NEUROD6Q96NK8 337 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 FHOD1Q9Y613 1164 aa15.4■□□□□ 0.06
TRIM40-207ENST00000396581 EYA2O00167 538 aa15.39■□□□□ 0.05
TRIM40-207ENST00000396581 SLC39A14Q15043 492 aa15.39■□□□□ 0.05
TRIM40-207ENST00000396581 OTUD7BQ6GQQ9 843 aa15.39■□□□□ 0.05
TRIM40-207ENST00000396581 TRIM65Q6PJ69 517 aa15.39■□□□□ 0.05
TRIM40-207ENST00000396581 ORC3Q9UBD5 711 aaPredicted RBP15.39■□□□□ 0.05
TRIM40-207ENST00000396581 C4AP0C0L4 1744 aa15.39■□□□□ 0.05
TRIM40-207ENST00000396581 C4BP0C0L5 1744 aa15.39■□□□□ 0.05
TRIM40-207ENST00000396581 AFF2P51816 1311 aa15.39■□□□□ 0.05
TRIM40-207ENST00000396581 KIF28PB7ZC32 967 aa15.39■□□□□ 0.05
TRIM40-207ENST00000396581 ZRANB2O95218 330 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRIM40-207ENST00000396581 POLR3DP05423 398 aaPredicted RBP15.39■□□□□ 0.05
TRIM40-207ENST00000396581 ZFYP08048 801 aaPredicted RBP15.39■□□□□ 0.05
TRIM40-207ENST00000396581 CLCN6P51797 869 aa15.39■□□□□ 0.05
TRIM40-207ENST00000396581 EIF5P55010 431 aaKnown RBP15.39■□□□□ 0.05
TRIM40-207ENST00000396581 LRRFIP1Q32MZ4 808 aaKnown RBP15.39■□□□□ 0.05
TRIM40-207ENST00000396581 INTS5Q6P9B9 1019 aaKnown RBP15.39■□□□□ 0.05
TRIM40-207ENST00000396581 LRRN4CLQ8ND94 238 aa15.39■□□□□ 0.05
TRIM40-207ENST00000396581 FBXW7Q969H0 707 aa15.39■□□□□ 0.05
TRIM40-207ENST00000396581 SRRTQ9BXP5 876 aaKnown RBP15.39■□□□□ 0.05
TRIM40-207ENST00000396581 GPHNQ9NQX3 736 aaPredicted RBP15.39■□□□□ 0.05
TRIM40-207ENST00000396581 NAP1L2Q9ULW6 460 aaPredicted RBP15.39■□□□□ 0.05
TRIM40-207ENST00000396581 THSD7AQ9UPZ6 1657 aa15.38■□□□□ 0.05
TRIM40-207ENST00000396581 A0A0G2JS52 829 aa15.38■□□□□ 0.05
TRIM40-207ENST00000396581 A0A1B0GUL7 405 aa15.38■□□□□ 0.05
TRIM40-207ENST00000396581 ERVV-1B6SEH8 477 aa15.38■□□□□ 0.05
TRIM40-207ENST00000396581 PPFIA3O75145 1194 aa15.38■□□□□ 0.05
TRIM40-207ENST00000396581 PPP6R2O75170 966 aa15.38■□□□□ 0.05
TRIM40-207ENST00000396581 ANTXR2P58335 489 aa15.38■□□□□ 0.05
TRIM40-207ENST00000396581 IMMTQ16891 758 aaKnown RBP15.38■□□□□ 0.05
TRIM40-207ENST00000396581 MROH7-TTC4A0A0A0MT08 1334 aa15.38■□□□□ 0.05
TRIM40-207ENST00000396581 KLF18A0A0U1RQI7 1052 aa15.37■□□□□ 0.05
TRIM40-207ENST00000396581 CCDC66A2RUB6 948 aa15.37■□□□□ 0.05
TRIM40-207ENST00000396581 PRC1O43663 620 aa15.37■□□□□ 0.05
TRIM40-207ENST00000396581 WDHD1O75717 1129 aaPredicted RBP15.37■□□□□ 0.05
TRIM40-207ENST00000396581 SYNE3Q6ZMZ3 975 aa15.37■□□□□ 0.05
TRIM40-207ENST00000396581 CCDC87Q9NVE4 849 aa15.37■□□□□ 0.05
TRIM40-207ENST00000396581 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
TRIM40-207ENST00000396581 CICQ96RK0 1608 aaPredicted RBP15.37■□□□□ 0.05
TRIM40-207ENST00000396581 CBFA2T2O43439 604 aa15.37■□□□□ 0.05
TRIM40-207ENST00000396581 CRKLP46109 303 aaKnown RBP15.37■□□□□ 0.05
TRIM40-207ENST00000396581 ITPK1Q13572 414 aa15.37■□□□□ 0.05
TRIM40-207ENST00000396581 LRRC24Q50LG9 513 aa15.37■□□□□ 0.05
TRIM40-207ENST00000396581 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
TRIM40-207ENST00000396581 REXO1L1PQ8IX06 675 aa15.37■□□□□ 0.05
TRIM40-207ENST00000396581 ELOA2Q8IYF1 753 aaPredicted RBP15.37■□□□□ 0.05
TRIM40-207ENST00000396581 TRPC5Q9UL62 973 aaPredicted RBP15.37■□□□□ 0.05
TRIM40-207ENST00000396581 GOLGA8BA8MQT2 603 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 BIN1O00499 593 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 FGAP02671 866 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 HLFQ16534 295 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 NCOA7Q8NI08 942 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 BCL11BQ9C0K0 894 aaPredicted RBP15.36■□□□□ 0.05
TRIM40-207ENST00000396581 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 ATRNO75882 1429 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 FANCGO15287 622 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 ATP8B1O43520 1251 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 PNMA6AP0CW24 399 aaPredicted RBP15.36■□□□□ 0.05
TRIM40-207ENST00000396581 ATP1A3P13637 1013 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 LMOD1P29536 600 aaPredicted RBP15.36■□□□□ 0.05
TRIM40-207ENST00000396581 MYL5Q02045 173 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 PTPAQ15257 358 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 ARHGAP29Q52LW3 1261 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 VSTM4Q8IW00 320 aa15.36■□□□□ 0.05
TRIM40-207ENST00000396581 TADA3O75528 432 aa15.35■□□□□ 0.05
TRIM40-207ENST00000396581 PCCAP05165 728 aaPredicted RBP15.35■□□□□ 0.05
TRIM40-207ENST00000396581 SYKP43405 635 aa15.35■□□□□ 0.05
TRIM40-207ENST00000396581 PLA2G4AP47712 749 aa15.35■□□□□ 0.05
TRIM40-207ENST00000396581 DZIP3Q86Y13 1208 aaKnown RBP15.35■□□□□ 0.05
TRIM40-207ENST00000396581 TMEM139Q8IV31 216 aa15.35■□□□□ 0.05
TRIM40-207ENST00000396581 ZBTB38Q8NAP3 1195 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms