RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ATP2B3Q16720 1220 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 CC2D2AQ9P2K1 1620 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 U2AF2P26368 475 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL4A3-202ENST00000396578 ZNF219Q9P2Y4 722 aaPredicted RBP15.63■□□□□ 0.09
COL4A3-202ENST00000396578 TOP2BQ02880 1626 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 NOX5Q96PH1 765 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 TTC41PQ6P2S7 1318 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 SV2BQ7L1I2 683 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 ZRANB1Q9UGI0 708 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 VSIG1Q86XK7 387 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 DDX27Q96GQ7 796 aaKnown RBP15.62■□□□□ 0.09
COL4A3-202ENST00000396578 GRM8O00222 908 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 NCOA1Q15788 1441 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 CNNM4Q6P4Q7 775 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 SMC5Q8IY18 1101 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 RAB3IPQ96QF0 476 aaPredicted RBP15.62■□□□□ 0.09
COL4A3-202ENST00000396578 SLC9C2Q5TAH2 1124 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 IMPACTQ9P2X3 320 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 SCAF11Q99590 1463 aaKnown RBP15.62■□□□□ 0.09
COL4A3-202ENST00000396578 TXNDC9O14530 226 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 STMN1P16949 149 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 CNGA1P29973 690 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 NMIQ13287 307 aaPredicted RBP15.62■□□□□ 0.09
COL4A3-202ENST00000396578 ZNF365Q70YC5 407 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 SRGAP1Q7Z6B7 1085 aa15.62■□□□□ 0.09
COL4A3-202ENST00000396578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.62■□□□□ 0.09
COL4A3-202ENST00000396578 CCDC117Q8IWD4 279 aaPredicted RBP15.61■□□□□ 0.09
COL4A3-202ENST00000396578 CREB3L3Q68CJ9 461 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 PLCD3Q8N3E9 789 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 APOBRQ0VD83 1088 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 ASIC2Q16515 512 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 PTPDC1A2A3K4 754 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 IRX5P78411 483 aaPredicted RBP15.61■□□□□ 0.09
COL4A3-202ENST00000396578 PPFIA1Q13136 1202 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 NUP58Q9BVL2 599 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 SYNRGQ9UMZ2 1314 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 IRX4P78413 519 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 PLS1Q14651 629 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 RILPL1Q5EBL4 403 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 PRPF31Q8WWY3 499 aaKnown RBP15.61■□□□□ 0.09
COL4A3-202ENST00000396578 RFC4P35249 363 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 DENND2CQ68D51 928 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 ZKSCAN3Q9BRR0 538 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 CHPF2Q9P2E5 772 aa15.61■□□□□ 0.09
COL4A3-202ENST00000396578 KRT9P35527 623 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 SLC8A3P57103 927 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 LIN9Q5TKA1 542 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 IFNL2Q8IZJ0 200 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 CABS1Q96KC9 395 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 MEIS3Q99687 375 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 BCAP29Q9UHQ4 241 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 VWA3AA6NCI4 1184 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 TRAF5O00463 557 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 SH3BGRP55822 239 aaPredicted RBP15.6■□□□□ 0.09
COL4A3-202ENST00000396578 HHATQ5VTY9 493 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 RNF168Q8IYW5 571 aaPredicted RBP15.6■□□□□ 0.09
COL4A3-202ENST00000396578 RIOK3O14730 519 aaKnown RBP15.6■□□□□ 0.09
COL4A3-202ENST00000396578 TNNI2P48788 182 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 ANKRD44Q8N8A2 993 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 TNFAIP3P21580 790 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 CALUO43852 315 aaPredicted RBP15.6■□□□□ 0.09
COL4A3-202ENST00000396578 TBC1D8BQ0IIM8 1120 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 CHST3Q7LGC8 479 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 MRRFQ96E11 262 aaKnown RBP15.6■□□□□ 0.09
COL4A3-202ENST00000396578 A0A1B0GVL5 298 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 WHAMMP3Q1A5X7 153 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 NBPF5PQ86XG9 351 aaPredicted RBP15.6■□□□□ 0.09
COL4A3-202ENST00000396578 FNBP1Q96RU3 617 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 IL15P40933 162 aaPredicted RBP15.6■□□□□ 0.09
COL4A3-202ENST00000396578 MTMR3Q13615 1198 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 PRR16Q569H4 304 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 VTI1AQ96AJ9 217 aa15.6■□□□□ 0.09
COL4A3-202ENST00000396578 CUL7Q14999 1698 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 PLCD1P51178 756 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 PICALMQ13492 652 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 TAF12Q16514 161 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 TMCO4Q5TGY1 634 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 PNMA8AQ86V59 439 aaPredicted RBP15.59■□□□□ 0.09
COL4A3-202ENST00000396578 GBP5Q96PP8 586 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 EXOC5O00471 708 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 PPFIA2O75334 1257 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 DHX32Q7L7V1 743 aaKnown RBP15.59■□□□□ 0.09
COL4A3-202ENST00000396578 ZNF804AQ7Z570 1209 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 LGSNQ5TDP6 509 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 MYRIPQ8NFW9 859 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 RNASE9P60153 205 aaKnown RBP15.59■□□□□ 0.09
COL4A3-202ENST00000396578 ELF2Q15723 593 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 VCX3AQ9NNX9 186 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 MAP3K1Q13233 1512 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 CDK13Q14004 1512 aaKnown RBP15.59■□□□□ 0.09
COL4A3-202ENST00000396578 PAK2Q13177 524 aa15.59■□□□□ 0.09
COL4A3-202ENST00000396578 HMGB1P1B2RPK0 211 aaPredicted RBP15.58■□□□□ 0.09
COL4A3-202ENST00000396578 GSDMBQ8TAX9 411 aa15.58■□□□□ 0.09
COL4A3-202ENST00000396578 NAP1L4Q99733 375 aaKnown RBP15.58■□□□□ 0.09
COL4A3-202ENST00000396578 ZBTB21Q9ULJ3 1066 aa15.58■□□□□ 0.09
COL4A3-202ENST00000396578 SECISBP2LQ93073 1101 aaKnown RBP15.58■□□□□ 0.09
COL4A3-202ENST00000396578 HVCN1Q96D96 273 aa15.58■□□□□ 0.09
COL4A3-202ENST00000396578 MUM1Q2TAK8 710 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 SYCE1Q8N0S2 351 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 ANKRD36BQ8N2N9 1353 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms