RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 IGHDP01880 384 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 TROVE2P10155 538 aaKnown RBP eCLIP12.69□□□□□ -0.384e-7■■■■■ 27.2
ITM2B-202ENST00000378565 RILPQ96NA2 401 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 ZNF445P59923 1031 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 LGSNQ5TDP6 509 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 SYCE1Q8N0S2 351 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 PPP4R1Q8TF05 950 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 SLC4A8Q2Y0W8 1093 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 HS2ST1Q7LGA3 356 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 AMOTQ4VCS5 1084 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 RBSNQ9H1K0 784 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 RRP15Q9Y3B9 282 aaKnown RBP12.69□□□□□ -0.38
ITM2B-202ENST00000378565 ZNF644Q9H582 1327 aaPredicted RBP12.69□□□□□ -0.38
ITM2B-202ENST00000378565 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 PARP2Q9UGN5 583 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 DRC3Q9H069 523 aa12.69□□□□□ -0.38
ITM2B-202ENST00000378565 STX2P32856 288 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 C17orf53Q8N3J3 647 aaPredicted RBP12.68□□□□□ -0.38
ITM2B-202ENST00000378565 ARHGAP42A6NI28 874 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 RPL13P26373 211 aaKnown RBP12.68□□□□□ -0.38
ITM2B-202ENST00000378565 KRT2P35908 639 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 TMTC1Q8IUR5 882 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 STK10O94804 968 aaKnown RBP12.68□□□□□ -0.38
ITM2B-202ENST00000378565 STX17P56962 302 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 PPP2R5AQ15172 486 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 ESCO1Q5FWF5 840 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 HOMER3Q9NSC5 361 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 RTL9Q8NET4 1388 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 GNGT1P63211 74 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 TAF7Q15545 349 aaPredicted RBP12.68□□□□□ -0.38
ITM2B-202ENST00000378565 ZKSCAN8Q15776 578 aaPredicted RBP12.68□□□□□ -0.38
ITM2B-202ENST00000378565 SEPT10Q9P0V9 454 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 PPP1R2P41236 205 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 INPP1P49441 399 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 PIK3R4Q99570 1358 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 BAG3O95817 575 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 NCAPGQ9BPX3 1015 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 KRT15P19012 456 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 PDCD7Q8N8D1 485 aaKnown RBP12.68□□□□□ -0.38
ITM2B-202ENST00000378565 ESR2Q92731 530 aa12.68□□□□□ -0.38
ITM2B-202ENST00000378565 BRD2P25440 801 aaKnown RBP12.68□□□□□ -0.38
ITM2B-202ENST00000378565 GAPVD1Q14C86 1478 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 CTNNA1P35221 906 aaKnown RBP12.67□□□□□ -0.38
ITM2B-202ENST00000378565 N4BP2L2Q92802 583 aaPredicted RBP12.67□□□□□ -0.38
ITM2B-202ENST00000378565 ASIC3Q9UHC3 531 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 MX2P20592 715 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 RAPGEF1Q13905 1077 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 KIFC2Q96AC6 838 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 TMED1Q13445 227 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 EIF2AQ9BY44 585 aaKnown RBP12.67□□□□□ -0.38
ITM2B-202ENST00000378565 MPHOSPH6Q99547 160 aaKnown RBP12.67□□□□□ -0.38
ITM2B-202ENST00000378565 THUMPD2Q9BTF0 503 aaKnown RBP12.67□□□□□ -0.38
ITM2B-202ENST00000378565 NUP58Q9BVL2 599 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 RSPH3Q86UC2 560 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 P3H4Q92791 437 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 GNAQP50148 359 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 CENPKQ9BS16 269 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 EFCAB8A8MWE9 144 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 F6X3S4 739 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 CEP104O60308 925 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 DCAF17Q5H9S7 520 aaPredicted RBP12.67□□□□□ -0.38
ITM2B-202ENST00000378565 MGARPQ8TDB4 240 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 BCAS4Q8TDM0 211 aa12.67□□□□□ -0.38
ITM2B-202ENST00000378565 TOM1L2Q6ZVM7 507 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
ITM2B-202ENST00000378565 RBM8AQ9Y5S9 174 aaKnown RBP12.66□□□□□ -0.38
ITM2B-202ENST00000378565 NCOA1Q15788 1441 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 RNASE9P60153 205 aaKnown RBP12.66□□□□□ -0.38
ITM2B-202ENST00000378565 VAT1LQ9HCJ6 419 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 RASA3Q14644 834 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 PPP1R42Q7Z4L9 355 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 MYD88Q99836 296 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 TRIM31Q9BZY9 425 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 MRPL46Q9H2W6 279 aaKnown RBP12.66□□□□□ -0.38
ITM2B-202ENST00000378565 FAM204AQ9H8W3 233 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 DBF4Q9UBU7 674 aaPredicted RBP12.66□□□□□ -0.38
ITM2B-202ENST00000378565 ABTB1Q969K4 478 aaPredicted RBP12.66□□□□□ -0.38
ITM2B-202ENST00000378565 NOC4LQ9BVI4 516 aaKnown RBP12.66□□□□□ -0.38
ITM2B-202ENST00000378565 MAP3K1Q13233 1512 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 EPB41P11171 864 aaKnown RBP12.66□□□□□ -0.38
ITM2B-202ENST00000378565 PHEXP78562 749 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 PPP2R5EQ16537 467 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 SDCCAG3Q96C92 435 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 ZNF500O60304 480 aaPredicted RBP12.66□□□□□ -0.38
ITM2B-202ENST00000378565 VPS41P49754 854 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 SND1Q7KZF4 910 aaKnown RBP eCLIP12.66□□□□□ -0.388e-8■■■■■ 34.2
ITM2B-202ENST00000378565 TMEM87AQ8NBN3 555 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 LRRC2Q9BYS8 371 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 SCOCQ9UIL1 159 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 SAR1BQ9Y6B6 198 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 IRX5P78411 483 aaPredicted RBP12.66□□□□□ -0.38
ITM2B-202ENST00000378565 SERPINB6P35237 376 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 JPH2Q9BR39 696 aaPredicted RBP12.66□□□□□ -0.38
ITM2B-202ENST00000378565 C6orf50Q9HD87 102 aa12.66□□□□□ -0.38
ITM2B-202ENST00000378565 BAG2O95816 211 aa12.65□□□□□ -0.38
ITM2B-202ENST00000378565 TRMT1LQ7Z2T5 733 aaKnown RBP12.65□□□□□ -0.38
ITM2B-202ENST00000378565 ESRRGP62508 458 aa12.65□□□□□ -0.38
ITM2B-202ENST00000378565 STX8Q9UNK0 236 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms