RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 MYO1AQ9UBC5 1043 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 BZW2Q9Y6E2 419 aaKnown RBP6.76□□□□□ -1.33
CUBN-202ENST00000377833 IFIT3O14879 490 aaKnown RBP6.76□□□□□ -1.33
CUBN-202ENST00000377833 CCDC6Q16204 474 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 SIL1Q9H173 461 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 PFDN4Q9NQP4 134 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 TRAPPC10P48553 1259 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 APBA1Q02410 837 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 ORC2Q13416 577 aaPredicted RBP6.76□□□□□ -1.33
CUBN-202ENST00000377833 PTCH1Q13635 1447 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 HSPA8P11142 646 aaKnown RBP6.76□□□□□ -1.33
CUBN-202ENST00000377833 MTIF2P46199 727 aaKnown RBP6.76□□□□□ -1.33
CUBN-202ENST00000377833 TSNAXIP1Q2TAA8 658 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 TBC1D9Q6ZT07 1266 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 TMEM87AQ8NBN3 555 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 CCDC26Q8TAB7 109 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 PTPRTO14522 1441 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 ABCC3O15438 1527 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 SPECC1Q5M775 1068 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 P3H4Q92791 437 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 TRIM11Q96F44 468 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 GOPCQ9HD26 462 aa6.76□□□□□ -1.33
CUBN-202ENST00000377833 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
CUBN-202ENST00000377833 LGSNQ5TDP6 509 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 RUFY4Q6ZNE9 571 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 SPC24Q8NBT2 197 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 FER1L4A9Z1Z3 1794 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 TOM1O60784 492 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 RUBCNQ92622 972 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 RSRC1Q96IZ7 334 aaKnown RBP6.75□□□□□ -1.33
CUBN-202ENST00000377833 C16orf45Q96MC5 204 aaPredicted RBP6.75□□□□□ -1.33
CUBN-202ENST00000377833 ATP6V0A2Q9Y487 856 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 N4BP3O15049 544 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 THAP12O43422 761 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 KRT2P35908 639 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 EVCP57679 992 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 FBF1Q8TES7 1133 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 SEC62Q99442 399 aaKnown RBP6.75□□□□□ -1.33
CUBN-202ENST00000377833 TSPY2A6NKD2 308 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 ARHGEF10LQ9HCE6 1279 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 ODF2LQ9ULJ1 636 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 KIRREL3Q8IZU9 778 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 CCHCR1Q8TD31 782 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 KIF2CQ99661 725 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 DDX23Q9BUQ8 820 aaKnown RBP6.75□□□□□ -1.33
CUBN-202ENST00000377833 CPSF1Q10570 1443 aaKnown RBP6.75□□□□□ -1.33
CUBN-202ENST00000377833 LRRC59Q96AG4 307 aaKnown RBP6.75□□□□□ -1.33
CUBN-202ENST00000377833 OVOS2A0A0G2JMS6 1433 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 KIF1AQ12756 1690 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 KRT25Q7Z3Z0 450 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 FSIP1Q8NA03 581 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 TACO1Q9BSH4 297 aaKnown RBP6.75□□□□□ -1.33
CUBN-202ENST00000377833 MBIPQ9NS73 344 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 A0A1B0GUA9 196 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 PUM3Q15397 648 aaKnown RBP6.75□□□□□ -1.33
CUBN-202ENST00000377833 RANBP6O60518 1105 aaKnown RBP6.75□□□□□ -1.33
CUBN-202ENST00000377833 CLCN1P35523 988 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 KRT79Q5XKE5 535 aa6.75□□□□□ -1.33
CUBN-202ENST00000377833 ATP2B3Q16720 1220 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 WDR66Q8TBY9 1149 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 TXNDC16Q9P2K2 825 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 ABCF2Q9UG63 623 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 TMEM2Q9UHN6 1383 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 POLD1P28340 1107 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 NLRP5P59047 1200 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 SMARCC2Q8TAQ2 1214 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 SEMA3EO15041 775 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.74□□□□□ -1.33
CUBN-202ENST00000377833 ARPP21Q9UBL0 812 aaPredicted RBP6.74□□□□□ -1.33
CUBN-202ENST00000377833 LUC7L2Q9Y383 392 aaKnown RBP6.74□□□□□ -1.33
CUBN-202ENST00000377833 COMMD10Q9Y6G5 202 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 RAPGEF3O95398 923 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 ELMSAN1Q6PJG2 1045 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 RGS22Q8NE09 1264 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 PPP1R12CQ9BZL4 782 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 DONSONQ9NYP3 566 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 SPTLC2O15270 562 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 BCRP11274 1271 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 RNASELQ05823 741 aaKnown RBP6.74□□□□□ -1.33
CUBN-202ENST00000377833 CDC37Q16543 378 aaPredicted RBP6.74□□□□□ -1.33
CUBN-202ENST00000377833 MAP7D1Q3KQU3 841 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 VSIG10Q8N0Z9 540 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 NECTIN2Q92692 538 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 NLRP3Q96P20 1036 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 F8W8V4 182 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 GJB2P29033 226 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 HLTFQ14527 1009 aaKnown RBP eCLIP6.74□□□□□ -1.33
CUBN-202ENST00000377833 MTA3Q9BTC8 594 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 CCDC129Q6ZRS4 1044 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 BICD1Q96G01 975 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 RNF113AO15541 343 aaKnown RBP6.74□□□□□ -1.33
CUBN-202ENST00000377833 MYL6BP14649 208 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 CCDC125Q86Z20 511 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 JPH2Q9BR39 696 aaPredicted RBP6.74□□□□□ -1.33
CUBN-202ENST00000377833 MED4Q9NPJ6 270 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 SYNRGQ9UMZ2 1314 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 A0A1W2PRG0 241 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 CALUO43852 315 aaPredicted RBP6.74□□□□□ -1.33
CUBN-202ENST00000377833 KRT10P13645 584 aa6.74□□□□□ -1.33
CUBN-202ENST00000377833 GABPB1Q06547 395 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms