RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 CCDC151A5D8V7 595 aa7.84□□□□□ -1.16
CSMD2-206ENST00000373388 ATP5HO75947 161 aa7.84□□□□□ -1.16
CSMD2-206ENST00000373388 GJB2P29033 226 aa7.84□□□□□ -1.16
CSMD2-206ENST00000373388 EEF1DP29692 281 aaKnown RBP7.84□□□□□ -1.16
CSMD2-206ENST00000373388 KRT71Q3SY84 523 aa7.84□□□□□ -1.16
CSMD2-206ENST00000373388 ISM2Q6H9L7 571 aa7.84□□□□□ -1.16
CSMD2-206ENST00000373388 TMEM132EQ6IEE7 984 aa7.84□□□□□ -1.16
CSMD2-206ENST00000373388 CALML4Q96GE6 196 aa7.84□□□□□ -1.16
CSMD2-206ENST00000373388 PARVBQ9HBI1 364 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 TTC41PQ6P2S7 1318 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 PPP4R1Q8TF05 950 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 CCDC169A6NNP5 214 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 MTHFSP49914 203 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.83□□□□□ -1.16
CSMD2-206ENST00000373388 AOPEPQ8N6M6 819 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 TUBA8Q9NY65 449 aaPredicted RBP7.83□□□□□ -1.16
CSMD2-206ENST00000373388 SMARCA2P51531 1590 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 LOC102724159A0A0B4J2E5 919 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 EXOSC9Q06265 439 aaKnown RBP7.83□□□□□ -1.16
CSMD2-206ENST00000373388 PWP2Q15269 919 aaKnown RBP7.83□□□□□ -1.16
CSMD2-206ENST00000373388 SLC44A4Q53GD3 710 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 TMTC1Q8IUR5 882 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 USP48Q86UV5 1035 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 SERPINB10P48595 397 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 TRIM58Q8NG06 486 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 FGFR1OP2Q9NVK5 253 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 LZTFL1Q9NQ48 299 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 UTP6Q9NYH9 597 aaKnown RBP7.83□□□□□ -1.16
CSMD2-206ENST00000373388 PUF60Q9UHX1 559 aaKnown RBP7.83□□□□□ -1.16
CSMD2-206ENST00000373388 RASGRF2O14827 1237 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 CHGBP05060 677 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 ARHGAP4P98171 946 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 MYO1AQ9UBC5 1043 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 SIL1Q9H173 461 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 STX2P32856 288 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 PSME1Q06323 249 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 GJC2Q5T442 439 aaPredicted RBP7.83□□□□□ -1.16
CSMD2-206ENST00000373388 PIP4K2CQ8TBX8 421 aa7.83□□□□□ -1.16
CSMD2-206ENST00000373388 PPP4R3AQ6IN85 833 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 SH3GL2Q99962 352 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 UBA5Q9GZZ9 404 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 FYCO1Q9BQS8 1478 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 TBC1D9Q6ZT07 1266 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 ZRANB2O95218 330 aaKnown RBP eCLIP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 HOXA7P31268 230 aaPredicted RBP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 HHATQ5VTY9 493 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 GCFC2P16383 781 aaKnown RBP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 GUCY2CP25092 1073 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 IRX5P78411 483 aaPredicted RBP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 CCDC51Q96ER9 411 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 KDM1AO60341 852 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 GAS8O95995 478 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 KRT2P35908 639 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 RAD51AP2Q09MP3 1159 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 BIN1O00499 593 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 MCF2L2Q86YR7 1114 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 DACT3Q96B18 629 aaPredicted RBP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 CALR3Q96L12 384 aaKnown RBP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 TMCC1O94876 653 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 ZNF75DP51815 510 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 BBOF1Q8ND07 529 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 KIF1BPQ96EK5 621 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 CFAP65Q6ZU64 1925 aaKnown RBP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 HSPA8P11142 646 aaKnown RBP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 CCT5P48643 541 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 CCDC184Q52MB2 194 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 RNF41Q9H4P4 317 aaPredicted RBP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 KIF21BO75037 1637 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 SUPT6HQ7KZ85 1726 aaKnown RBP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 INAQ16352 499 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 CCDC93Q567U6 631 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 CTAGE3PQ8IX95 158 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 TEX9Q8N6V9 391 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 PPP2R1AP30153 589 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 CCDC80Q76M96 950 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 ARMCX6Q7L4S7 300 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 BRAPQ7Z569 592 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 FCHSD1Q86WN1 690 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 TBC1D23Q9NUY8 699 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 DDX41Q9UJV9 622 aaKnown RBP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 MAP1BP46821 2468 aaKnown RBP7.82□□□□□ -1.16
CSMD2-206ENST00000373388 UBXN1Q04323 297 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 GAS2L2Q8NHY3 880 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 OPTNQ96CV9 577 aa7.82□□□□□ -1.16
CSMD2-206ENST00000373388 F13A1P00488 732 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 OCA2Q04671 838 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 CEP70Q8NHQ1 597 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 MCF2LO15068 1137 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 IFT88Q13099 833 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 GLE1Q53GS7 698 aaKnown RBP7.81□□□□□ -1.16
CSMD2-206ENST00000373388 PALM2Q8IXS6 379 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 SNX29Q8TEQ0 813 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 RAPGEF4Q8WZA2 1011 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 CCDC194A0A1B0GVG4 234 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 TWISTNBQ3B726 338 aaPredicted RBP7.81□□□□□ -1.16
CSMD2-206ENST00000373388 AACSQ86V21 672 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 STOML1Q9UBI4 398 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 CTNNA1P35221 906 aaKnown RBP7.81□□□□□ -1.16
CSMD2-206ENST00000373388 RUNDC3BQ96NL0 473 aa7.81□□□□□ -1.16
CSMD2-206ENST00000373388 FAM204AQ9H8W3 233 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms