RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 TMEM87BQ96K49 555 aa9.56□□□□□ -0.88
SSR2-202ENST00000368311 ASNSP08243 561 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 GNAT1P11488 350 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 GTF2A2P52657 109 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 HDLBPQ00341 1268 aaKnown RBP9.55□□□□□ -0.88
SSR2-202ENST00000368311 MAP2K1Q02750 393 aaPredicted RBP9.55□□□□□ -0.88
SSR2-202ENST00000368311 CCDC117Q8IWD4 279 aaPredicted RBP9.55□□□□□ -0.88
SSR2-202ENST00000368311 APPBP2Q92624 585 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 EXOC4Q96A65 974 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 LBHD1Q9BQE6 289 aaPredicted RBP9.55□□□□□ -0.88
SSR2-202ENST00000368311 HOXC10Q9NYD6 342 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 ABCC12Q96J65 1359 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 MANSC4A6NHS7 340 aaPredicted RBP9.55□□□□□ -0.88
SSR2-202ENST00000368311 C9orf131Q5VYM1 1079 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 PAF1Q8N7H5 531 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 LRRC45Q96CN5 670 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 TNNI3KQ59H18 835 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 FMNL3Q8IVF7 1028 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 GIMAP8Q8ND71 665 aaPredicted RBP9.55□□□□□ -0.88
SSR2-202ENST00000368311 HELBQ8NG08 1087 aaPredicted RBP9.55□□□□□ -0.88
SSR2-202ENST00000368311 PI4KBQ9UBF8 816 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 FPGT-TNNI3KV9GXZ4 949 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 A0A1B0GUL7 405 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 BECN2A8MW95 431 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 PES1O00541 588 aaKnown RBP9.55□□□□□ -0.88
SSR2-202ENST00000368311 FAM160B1Q5W0V3 765 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 PKNOX2Q96KN3 472 aa9.55□□□□□ -0.88
SSR2-202ENST00000368311 HDAC1Q13547 482 aaPredicted RBP9.54□□□□□ -0.88
SSR2-202ENST00000368311 CERKLQ49MI3 558 aaPredicted RBP9.54□□□□□ -0.88
SSR2-202ENST00000368311 CWC27Q6UX04 472 aaKnown RBP9.54□□□□□ -0.88
SSR2-202ENST00000368311 C8orf58Q8NAV2 365 aa9.54□□□□□ -0.88
SSR2-202ENST00000368311 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.54□□□□□ -0.88
SSR2-202ENST00000368311 EXOC6BQ9Y2D4 811 aa9.54□□□□□ -0.88
SSR2-202ENST00000368311 NFIXQ14938 502 aa9.54□□□□□ -0.88
SSR2-202ENST00000368311 C19orf81C9J6K1 198 aa9.54□□□□□ -0.88
SSR2-202ENST00000368311 LDHDQ86WU2 507 aa9.54□□□□□ -0.88
SSR2-202ENST00000368311 A0A0U1RQG5 324 aaPredicted RBP9.54□□□□□ -0.88
SSR2-202ENST00000368311 KCNA4P22459 653 aa9.54□□□□□ -0.88
SSR2-202ENST00000368311 FCGRTP55899 365 aa9.54□□□□□ -0.88
SSR2-202ENST00000368311 ABCB5Q2M3G0 1257 aa9.54□□□□□ -0.88
SSR2-202ENST00000368311 PHACTR3Q96KR7 559 aa9.54□□□□□ -0.88
SSR2-202ENST00000368311 HERC5Q9UII4 1024 aaKnown RBP9.54□□□□□ -0.88
SSR2-202ENST00000368311 SAMM50Q9Y512 469 aa9.54□□□□□ -0.88
SSR2-202ENST00000368311 OFD1O75665 1012 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 DPEP1P16444 411 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 TNNT3P45378 269 aaPredicted RBP9.53□□□□□ -0.88
SSR2-202ENST00000368311 TFCP2Q12800 502 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 MB21D1Q8N884 522 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 RAET1EQ8TD07 263 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 C1orf115Q9H7X2 142 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 SRGAP2BP0DMP2 458 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 ZNF157P51786 506 aaPredicted RBP9.53□□□□□ -0.88
SSR2-202ENST00000368311 UPF1Q92900 1129 aaKnown RBP eCLIP9.53□□□□□ -0.88
SSR2-202ENST00000368311 TRIM27P14373 513 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 APLP1P51693 650 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 SNX16P57768 344 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 KANK3Q6NY19 840 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 TBCAO75347 108 aaKnown RBP9.53□□□□□ -0.88
SSR2-202ENST00000368311 SLC1A4P43007 532 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 METAP2P50579 478 aaKnown RBP eCLIP9.53□□□□□ -0.88
SSR2-202ENST00000368311 PDE4DQ08499 809 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 GPC2Q8N158 579 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 PLA2G12BQ9BX93 195 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 PDCL3Q9H2J4 239 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 KANSL2Q9H9L4 492 aa9.53□□□□□ -0.88
SSR2-202ENST00000368311 ANGEL1Q9UNK9 670 aaKnown RBP9.53□□□□□ -0.88
SSR2-202ENST00000368311 VPS37CA5D8V6 355 aaPredicted RBP9.52□□□□□ -0.88
SSR2-202ENST00000368311 MSNP26038 577 aaKnown RBP9.52□□□□□ -0.88
SSR2-202ENST00000368311 BTDP43251 543 aa9.52□□□□□ -0.88
SSR2-202ENST00000368311 SF3B3Q15393 1217 aaKnown RBP9.52□□□□□ -0.88
SSR2-202ENST00000368311 RTN1Q16799 776 aa9.52□□□□□ -0.88
SSR2-202ENST00000368311 SLC17A8Q8NDX2 589 aa9.52□□□□□ -0.88
SSR2-202ENST00000368311 PER1O15534 1290 aaPredicted RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 PDE8BO95263 885 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 FKBP1AP62942 108 aaKnown RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 DOK7Q18PE1 504 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 GPATCH4Q5T3I0 446 aaKnown RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 EXOC6Q8TAG9 804 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 NKX2-3Q8TAU0 364 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 JAKMIP1Q96N16 626 aaKnown RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 SRP68Q9UHB9 627 aaKnown RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 MYO6Q9UM54 1294 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 KDM6AO15550 1401 aaPredicted RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 PALM3A6NDB9 673 aaPredicted RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 USP17L5A8MUK1 530 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 TCP10L2B9ZVM9 353 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 EPHX2P34913 555 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 GALNT17Q6IS24 598 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 CHADLQ6NUI6 762 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 KCNV1Q6PIU1 500 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 NOC3LQ8WTT2 800 aaKnown RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 ZNF215Q9UL58 517 aaPredicted RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 ROBO1Q9Y6N7 1651 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 NRKQ7Z2Y5 1582 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 FOSP01100 380 aaPredicted RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 NAPAP54920 295 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 FSTL1Q12841 308 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 CWF19L2Q2TBE0 894 aaKnown RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 CFAP100Q494V2 611 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms