RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 POLR3DP05423 398 aaPredicted RBP25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 SPC24Q8NBT2 197 aa25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 KRT23Q9C075 422 aa25.9■■□□□ 1.74
NKX2-1-201ENST00000354822 SPTLC2O15270 562 aa25.89■■□□□ 1.74
NKX2-1-201ENST00000354822 ZBTB43O43298 467 aa25.89■■□□□ 1.74
NKX2-1-201ENST00000354822 MBD4O95243 580 aa25.89■■□□□ 1.74
NKX2-1-201ENST00000354822 ZNF75DP51815 510 aa25.89■■□□□ 1.74
NKX2-1-201ENST00000354822 KIF23Q02241 960 aaPredicted RBP25.89■■□□□ 1.74
NKX2-1-201ENST00000354822 CLEC4GQ6UXB4 293 aa25.89■■□□□ 1.74
NKX2-1-201ENST00000354822 FMR1NBQ8N0W7 255 aaPredicted RBP25.89■■□□□ 1.74
NKX2-1-201ENST00000354822 DOCK2Q92608 1830 aa25.89■■□□□ 1.73
NKX2-1-201ENST00000354822 IQCB1Q15051 598 aa25.89■■□□□ 1.73
NKX2-1-201ENST00000354822 CDC5LQ99459 802 aaKnown RBP25.89■■□□□ 1.73
NKX2-1-201ENST00000354822 CLIC4Q9Y696 253 aa25.89■■□□□ 1.73
NKX2-1-201ENST00000354822 PNPLA7Q6ZV29 1317 aa25.89■■□□□ 1.73
NKX2-1-201ENST00000354822 DNTTIP2Q5QJE6 756 aaKnown RBP25.88■■□□□ 1.73
NKX2-1-201ENST00000354822 NFXL1Q6ZNB6 911 aa25.88■■□□□ 1.73
NKX2-1-201ENST00000354822 ALG1Q9BT22 464 aa25.88■■□□□ 1.73
NKX2-1-201ENST00000354822 C4AP0C0L4 1744 aa25.88■■□□□ 1.73
NKX2-1-201ENST00000354822 C4BP0C0L5 1744 aa25.88■■□□□ 1.73
NKX2-1-201ENST00000354822 TMEM67Q5HYA8 995 aa25.88■■□□□ 1.73
NKX2-1-201ENST00000354822 RAB11FIP4Q86YS3 637 aa25.88■■□□□ 1.73
NKX2-1-201ENST00000354822 KIAA1524Q8TCG1 905 aa25.88■■□□□ 1.73
NKX2-1-201ENST00000354822 LY9Q9HBG7 655 aa25.88■■□□□ 1.73
NKX2-1-201ENST00000354822 DENND2AQ9ULE3 1009 aa25.88■■□□□ 1.73
NKX2-1-201ENST00000354822 AKNAD1Q5T1N1 836 aa25.87■■□□□ 1.73
NKX2-1-201ENST00000354822 ANO1Q5XXA6 986 aa25.87■■□□□ 1.73
NKX2-1-201ENST00000354822 SARM1Q6SZW1 724 aa25.87■■□□□ 1.73
NKX2-1-201ENST00000354822 MTA3Q9BTC8 594 aa25.87■■□□□ 1.73
NKX2-1-201ENST00000354822 NAT10Q9H0A0 1025 aaKnown RBP25.87■■□□□ 1.73
NKX2-1-201ENST00000354822 EPB41L4AQ9HCS5 686 aaPredicted RBP25.87■■□□□ 1.73
NKX2-1-201ENST00000354822 NEDD4P46934 1319 aa25.87■■□□□ 1.73
NKX2-1-201ENST00000354822 BCORQ6W2J9 1755 aa25.87■■□□□ 1.73
NKX2-1-201ENST00000354822 GSG1L2A8MUP6 293 aa25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 CDC25BP30305 580 aa25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 BCAMP50895 628 aa25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 CHRNDQ07001 517 aa25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 DRC7Q8IY82 874 aa25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 FNBP4Q8N3X1 1017 aaPredicted RBP25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 SDF4Q9BRK5 362 aa25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 ARMT1Q9H993 441 aa25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 LAMB2P55268 1798 aa25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 MFSD6Q6ZSS7 791 aa25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 KCNF1Q9H3M0 494 aa25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 ZSWIM5Q9P217 1185 aa25.86■■□□□ 1.73
NKX2-1-201ENST00000354822 IARSP41252 1262 aaKnown RBP25.85■■□□□ 1.73
NKX2-1-201ENST00000354822 SNAP23O00161 211 aa25.85■■□□□ 1.73
NKX2-1-201ENST00000354822 IFIT3O14879 490 aaKnown RBP25.85■■□□□ 1.73
NKX2-1-201ENST00000354822 LRP2BPQ9P2M1 347 aa25.85■■□□□ 1.73
NKX2-1-201ENST00000354822 SLC12A7Q9Y666 1083 aa25.85■■□□□ 1.73
NKX2-1-201ENST00000354822 CCDC69A6NI79 296 aa25.84■■□□□ 1.73
NKX2-1-201ENST00000354822 GOLGA8AA7E2F4 631 aa25.84■■□□□ 1.73
NKX2-1-201ENST00000354822 BECN2A8MW95 431 aa25.84■■□□□ 1.73
NKX2-1-201ENST00000354822 RRP9O43818 475 aaKnown RBP25.84■■□□□ 1.73
NKX2-1-201ENST00000354822 MICU3Q86XE3 530 aa25.84■■□□□ 1.73
NKX2-1-201ENST00000354822 STAG1Q8WVM7 1258 aa25.84■■□□□ 1.73
NKX2-1-201ENST00000354822 PRIMPOLQ96LW4 560 aa25.84■■□□□ 1.73
NKX2-1-201ENST00000354822 STK36Q9NRP7 1315 aa25.84■■□□□ 1.73
NKX2-1-201ENST00000354822 A0A1B0GVL5 298 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 KIF28PB7ZC32 967 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 CDC27P30260 824 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 NDUFA8P51970 172 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 TRIM29Q14134 588 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 SART3Q15020 963 aaKnown RBP25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 SLC39A14Q15043 492 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 NTRK3Q16288 839 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 CEP57L1Q8IYX8 460 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 TMTC2Q8N394 836 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 NKX2-3Q8TAU0 364 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 GNL3LQ9NVN8 582 aaKnown RBP25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 SLC4A4Q9Y6R1 1079 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 UQCRHLA0A096LP55 91 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 RGL2O15211 777 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 UQCRHP07919 91 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 CMA1P23946 247 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 KRT40Q6A162 431 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 C11orf57Q6ZUT1 292 aaPredicted RBP25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 LINC00116Q8NCU8 138 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 WASF1Q92558 559 aa25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 RNF41Q9H4P4 317 aaPredicted RBP25.83■■□□□ 1.73
NKX2-1-201ENST00000354822 TDO2P48775 406 aa25.82■■□□□ 1.72
NKX2-1-201ENST00000354822 CTDSPL2Q05D32 466 aa25.82■■□□□ 1.72
NKX2-1-201ENST00000354822 JMYQ8N9B5 988 aa25.82■■□□□ 1.72
NKX2-1-201ENST00000354822 GJB4Q9NTQ9 266 aa25.82■■□□□ 1.72
NKX2-1-201ENST00000354822 VPS37DQ86XT2 251 aa25.82■■□□□ 1.72
NKX2-1-201ENST00000354822 MRFAP1L1Q96HT8 127 aa25.82■■□□□ 1.72
NKX2-1-201ENST00000354822 NID2Q14112 1375 aa25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 PPP6R2O75170 966 aa25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 PTGS1P23219 599 aa25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 SSRP1Q08945 709 aaKnown RBP25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 GNL2Q13823 731 aaKnown RBP25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 SF3B3Q15393 1217 aaKnown RBP25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 ZRSR1Q15695 479 aaKnown RBP25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 CCDC186Q7Z3E2 898 aa25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 SENP2Q9HC62 589 aa25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 FAM217BQ9NTX9 383 aaPredicted RBP25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 KIAA1468Q9P260 1216 aa25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 SPATA31A6Q5VVP1 1343 aa25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 TIAM2Q8IVF5 1701 aa25.81■■□□□ 1.72
NKX2-1-201ENST00000354822 DYNC1I1O14576 645 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms