RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 GJB4Q9NTQ9 266 aa16.79■□□□□ 0.28
RET-201ENST00000340058 PPRC1Q5VV67 1664 aaKnown RBP16.79■□□□□ 0.28
RET-201ENST00000340058 POLR2DO15514 142 aaKnown RBP16.79■□□□□ 0.28
RET-201ENST00000340058 CBX8Q9HC52 389 aa16.79■□□□□ 0.28
RET-201ENST00000340058 DNAI1Q9UI46 699 aa16.79■□□□□ 0.28
RET-201ENST00000340058 MAST3O60307 1309 aa16.78■□□□□ 0.28
RET-201ENST00000340058 SPATA31A3Q5VYP0 1347 aa16.78■□□□□ 0.28
RET-201ENST00000340058 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
RET-201ENST00000340058 SCRN1Q12765 414 aa16.78■□□□□ 0.28
RET-201ENST00000340058 KRI1Q8N9T8 703 aaKnown RBP16.78■□□□□ 0.28
RET-201ENST00000340058 DSCC1Q9BVC3 393 aa16.78■□□□□ 0.28
RET-201ENST00000340058 PUS7LQ9H0K6 701 aaKnown RBP16.78■□□□□ 0.28
RET-201ENST00000340058 SRP68Q9UHB9 627 aaKnown RBP16.78■□□□□ 0.28
RET-201ENST00000340058 KRT2P35908 639 aa16.78■□□□□ 0.28
RET-201ENST00000340058 ZYXQ15942 572 aaKnown RBP16.78■□□□□ 0.28
RET-201ENST00000340058 FKBP15Q5T1M5 1219 aa16.78■□□□□ 0.28
RET-201ENST00000340058 BRAPQ7Z569 592 aa16.78■□□□□ 0.28
RET-201ENST00000340058 IFNL3Q8IZI9 196 aa16.78■□□□□ 0.28
RET-201ENST00000340058 CCDC40Q4G0X9 1142 aa16.78■□□□□ 0.28
RET-201ENST00000340058 AKNAD1Q5T1N1 836 aa16.78■□□□□ 0.28
RET-201ENST00000340058 CCDC12Q8WUD4 166 aaPredicted RBP16.78■□□□□ 0.28
RET-201ENST00000340058 TFAP4Q01664 338 aa16.77■□□□□ 0.28
RET-201ENST00000340058 TMEM87BQ96K49 555 aa16.77■□□□□ 0.28
RET-201ENST00000340058 CDCA7Q9BWT1 371 aaPredicted RBP16.77■□□□□ 0.28
RET-201ENST00000340058 ARHGEF40Q8TER5 1519 aa16.77■□□□□ 0.28
RET-201ENST00000340058 M0R2C6 588 aa16.77■□□□□ 0.28
RET-201ENST00000340058 ZSCAN12O43309 604 aa16.77■□□□□ 0.27
RET-201ENST00000340058 MATR3P43243 847 aaKnown RBP eCLIP16.77■□□□□ 0.27
RET-201ENST00000340058 ZNF445P59923 1031 aa16.77■□□□□ 0.27
RET-201ENST00000340058 CUL5Q93034 780 aa16.77■□□□□ 0.27
RET-201ENST00000340058 DRC1Q96MC2 740 aa16.77■□□□□ 0.27
RET-201ENST00000340058 INCENPQ9NQS7 918 aa16.77■□□□□ 0.27
RET-201ENST00000340058 ADGRL3Q9HAR2 1447 aa16.77■□□□□ 0.27
RET-201ENST00000340058 CPS1P31327 1500 aa16.77■□□□□ 0.27
RET-201ENST00000340058 KIF5CO60282 957 aa16.77■□□□□ 0.27
RET-201ENST00000340058 GSDMDP57764 484 aa16.77■□□□□ 0.27
RET-201ENST00000340058 JAKMIP3Q5VZ66 844 aa16.77■□□□□ 0.27
RET-201ENST00000340058 OGFOD1Q8N543 542 aa16.77■□□□□ 0.27
RET-201ENST00000340058 KCNH3Q9ULD8 1083 aa16.77■□□□□ 0.27
RET-201ENST00000340058 HEG1Q9ULI3 1381 aa16.76■□□□□ 0.27
RET-201ENST00000340058 PTPRMP28827 1452 aa16.76■□□□□ 0.27
RET-201ENST00000340058 CYP2D7A0A087X1C5 515 aa16.76■□□□□ 0.27
RET-201ENST00000340058 MYO1BO43795 1136 aa16.76■□□□□ 0.27
RET-201ENST00000340058 GTF2IP78347 998 aa16.76■□□□□ 0.27
RET-201ENST00000340058 CEP135Q66GS9 1140 aa16.76■□□□□ 0.27
RET-201ENST00000340058 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.76■□□□□ 0.27
RET-201ENST00000340058 PARP3Q9Y6F1 533 aa16.76■□□□□ 0.27
RET-201ENST00000340058 BTBD18B2RXH4 712 aa16.76■□□□□ 0.27
RET-201ENST00000340058 NBPF26B4DH59 902 aa16.76■□□□□ 0.27
RET-201ENST00000340058 ZNF202O95125 648 aa16.76■□□□□ 0.27
RET-201ENST00000340058 TTLL12Q14166 644 aaPredicted RBP16.76■□□□□ 0.27
RET-201ENST00000340058 NBPF14Q5TI25 921 aa16.76■□□□□ 0.27
RET-201ENST00000340058 NBPF10Q6P3W6 841 aaKnown RBP16.76■□□□□ 0.27
RET-201ENST00000340058 NBPF15Q8N660 670 aa16.76■□□□□ 0.27
RET-201ENST00000340058 AIFM3Q96NN9 605 aa16.76■□□□□ 0.27
RET-201ENST00000340058 ABCA9Q8IUA7 1624 aa16.76■□□□□ 0.27
RET-201ENST00000340058 MROH5Q6ZUA9 1318 aa16.76■□□□□ 0.27
RET-201ENST00000340058 SPA17Q15506 151 aa16.76■□□□□ 0.27
RET-201ENST00000340058 MTERF4Q7Z6M4 381 aaKnown RBP16.76■□□□□ 0.27
RET-201ENST00000340058 TRMT44Q8IYL2 757 aaKnown RBP16.76■□□□□ 0.27
RET-201ENST00000340058 TSC1Q92574 1164 aa16.76■□□□□ 0.27
RET-201ENST00000340058 GGA1Q9UJY5 639 aa16.76■□□□□ 0.27
RET-201ENST00000340058 PDIA3P30101 505 aaKnown RBP16.75■□□□□ 0.27
RET-201ENST00000340058 USP8P40818 1118 aa16.75■□□□□ 0.27
RET-201ENST00000340058 GNAQP50148 359 aa16.75■□□□□ 0.27
RET-201ENST00000340058 KARSQ15046 597 aaKnown RBP16.75■□□□□ 0.27
RET-201ENST00000340058 EEF2KMTQ96G04 330 aa16.75■□□□□ 0.27
RET-201ENST00000340058 GPR101Q96P66 508 aaPredicted RBP16.75■□□□□ 0.27
RET-201ENST00000340058 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
RET-201ENST00000340058 CCT6AP40227 531 aaKnown RBP16.75■□□□□ 0.27
RET-201ENST00000340058 ARID5AQ03989 594 aa16.75■□□□□ 0.27
RET-201ENST00000340058 PRM3Q9NNZ6 103 aa16.75■□□□□ 0.27
RET-201ENST00000340058 EXOC1Q9NV70 894 aa16.75■□□□□ 0.27
RET-201ENST00000340058 CPSF1Q10570 1443 aaKnown RBP16.75■□□□□ 0.27
RET-201ENST00000340058 ERICH4A6NGS2 130 aa16.75■□□□□ 0.27
RET-201ENST00000340058 CAVIN2O95810 425 aa16.75■□□□□ 0.27
RET-201ENST00000340058 CALM1P0DP23 149 aa16.75■□□□□ 0.27
RET-201ENST00000340058 CALM2P0DP24 149 aa16.75■□□□□ 0.27
RET-201ENST00000340058 CALM3P0DP25 149 aa16.75■□□□□ 0.27
RET-201ENST00000340058 DYNLL1P63167 89 aaKnown RBP16.75■□□□□ 0.27
RET-201ENST00000340058 ZNF827Q17R98 1081 aa16.75■□□□□ 0.27
RET-201ENST00000340058 ZMYM1Q5SVZ6 1142 aa16.75■□□□□ 0.27
RET-201ENST00000340058 TAF3Q5VWG9 929 aa16.75■□□□□ 0.27
RET-201ENST00000340058 PKD2L1Q9P0L9 805 aa16.75■□□□□ 0.27
RET-201ENST00000340058 GOLGA8HP0CJ92 632 aa16.74■□□□□ 0.27
RET-201ENST00000340058 KANK3Q6NY19 840 aa16.74■□□□□ 0.27
RET-201ENST00000340058 ZNF654Q8IZM8 581 aa16.74■□□□□ 0.27
RET-201ENST00000340058 CLIC6Q96NY7 704 aa16.74■□□□□ 0.27
RET-201ENST00000340058 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
RET-201ENST00000340058 CLSTN2Q9H4D0 955 aa16.74■□□□□ 0.27
RET-201ENST00000340058 CASQ1P31415 396 aa16.74■□□□□ 0.27
RET-201ENST00000340058 MYSM1Q5VVJ2 828 aa16.74■□□□□ 0.27
RET-201ENST00000340058 SUSD4Q5VX71 490 aa16.74■□□□□ 0.27
RET-201ENST00000340058 ZNF397Q8NF99 534 aaPredicted RBP16.74■□□□□ 0.27
RET-201ENST00000340058 CCDC102AQ96A19 550 aa16.74■□□□□ 0.27
RET-201ENST00000340058 PPARAQ07869 468 aa16.74■□□□□ 0.27
RET-201ENST00000340058 DOK7Q18PE1 504 aa16.74■□□□□ 0.27
RET-201ENST00000340058 FAM196AQ6ZSG2 479 aa16.74■□□□□ 0.27
RET-201ENST00000340058 FAM170AA1A519 330 aa16.73■□□□□ 0.27
RET-201ENST00000340058 POLR3GO15318 223 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms