RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 SEC31BQ9NQW1 1179 aa15.6■□□□□ 0.09
TUBA1B-201ENST00000332858 ABCC12Q96J65 1359 aa15.6■□□□□ 0.09
TUBA1B-201ENST00000332858 DDX60Q8IY21 1712 aaKnown RBP15.6■□□□□ 0.09
TUBA1B-201ENST00000332858 PDE8AO60658 829 aa15.6■□□□□ 0.09
TUBA1B-201ENST00000332858 ZNF512BQ96KM6 892 aaPredicted RBP15.6■□□□□ 0.09
TUBA1B-201ENST00000332858 FAM217BQ9NTX9 383 aaPredicted RBP15.6■□□□□ 0.09
TUBA1B-201ENST00000332858 SLIT2O94813 1529 aa15.6■□□□□ 0.09
TUBA1B-201ENST00000332858 BCL9O00512 1426 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 RANBP6O60518 1105 aaKnown RBP15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 TNNT1P13805 278 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 PFKFB1P16118 471 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 KRT40Q6A162 431 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 BRAPQ7Z569 592 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 VPS37DQ86XT2 251 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 ZMYM6O95789 1325 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 PRKAB2O43741 272 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 ARID4AP29374 1257 aaPredicted RBP15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 CHAF1AQ13111 956 aaPredicted RBP15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 RASGRF1Q13972 1273 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 CHMP4CQ96CF2 233 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 C4AP0C0L4 1744 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 C4BP0C0L5 1744 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 FGFR2P21802 821 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 NAA30Q147X3 362 aaPredicted RBP15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 TTF1Q15361 905 aaPredicted RBP15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 NTRK3Q16288 839 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 MAGEB6Q8N7X4 407 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 AIDAQ96BJ3 306 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 ARMT1Q9H993 441 aa15.59■□□□□ 0.09
TUBA1B-201ENST00000332858 NUP98P52948 1817 aa15.58■□□□□ 0.08
TUBA1B-201ENST00000332858 SKILP12757 684 aa15.58■□□□□ 0.08
TUBA1B-201ENST00000332858 TPD52L1Q16890 204 aaPredicted RBP15.58■□□□□ 0.08
TUBA1B-201ENST00000332858 CLIC6Q96NY7 704 aa15.58■□□□□ 0.08
TUBA1B-201ENST00000332858 LY9Q9HBG7 655 aa15.58■□□□□ 0.08
TUBA1B-201ENST00000332858 ZSWIM5Q9P217 1185 aa15.58■□□□□ 0.08
TUBA1B-201ENST00000332858 MYH3P11055 1940 aa15.58■□□□□ 0.08
TUBA1B-201ENST00000332858 CCDC69A6NI79 296 aa15.58■□□□□ 0.08
TUBA1B-201ENST00000332858 SUSD4Q5VX71 490 aa15.58■□□□□ 0.08
TUBA1B-201ENST00000332858 SPATA5Q8NB90 893 aa15.58■□□□□ 0.08
TUBA1B-201ENST00000332858 WDR19Q8NEZ3 1342 aa15.58■□□□□ 0.08
TUBA1B-201ENST00000332858 MBD4O95243 580 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 SLC3A2P08195 630 aaKnown RBP15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 CCZ1BP86790 482 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 CCZ1P86791 482 aaPredicted RBP15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 SLC39A14Q15043 492 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 PUM3Q15397 648 aaKnown RBP15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 ZNF34Q8IZ26 560 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 IFNL3Q8IZI9 196 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 ZKSCAN3Q9BRR0 538 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 TRMT1Q9NXH9 659 aaKnown RBP15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 A0A0G2JS52 829 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 LPIN2Q92539 896 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 ATRNO75882 1429 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 CTIFO43310 598 aaKnown RBP15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 LRP6O75581 1613 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 CMA1P23946 247 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 GUCY1A2P33402 732 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 SHC4Q6S5L8 630 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 NFXL1Q6ZNB6 911 aa15.57■□□□□ 0.08
TUBA1B-201ENST00000332858 SMIM22K7EJ46 135 aa15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 ZBTB43O43298 467 aa15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 BCAMP50895 628 aa15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 PTPAQ15257 358 aa15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 TMEM67Q5HYA8 995 aa15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 MTERF4Q7Z6M4 381 aaKnown RBP15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 CMTR1Q8N1G2 835 aaKnown RBP15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 CCDC82Q8N4S0 544 aa15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 ZNF592Q92610 1267 aa15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 XPO4Q9C0E2 1151 aaKnown RBP15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 WTIPA6NIX2 430 aaPredicted RBP15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 NCAPHQ15003 741 aa15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 NAT10Q9H0A0 1025 aaKnown RBP15.56■□□□□ 0.08
TUBA1B-201ENST00000332858 RBM6P78332 1123 aaKnown RBP15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 MAP3K14Q99558 947 aa15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 IFNKQ9P0W0 207 aa15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 GSG1L2A8MUP6 293 aa15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 PATL2C9JE40 543 aaKnown RBP15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 SPECC1Q5M775 1068 aa15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 IQSEC3Q9UPP2 1182 aaPredicted RBP15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 GOLGA8AA7E2F4 631 aa15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 ATP1A3P13637 1013 aa15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 IL6STP40189 918 aaPredicted RBP15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 RRP12Q5JTH9 1297 aaKnown RBP15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 SLC26A6Q9BXS9 759 aa15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 NAPBQ9H115 298 aa15.55■□□□□ 0.08
TUBA1B-201ENST00000332858 EXOC5O00471 708 aa15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 IFIT3O14879 490 aaKnown RBP15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 UQCRFS1P1P0C7P4 283 aa15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 IARSP41252 1262 aaKnown RBP15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 PTPN21Q16825 1174 aa15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 LCORLQ8N3X6 602 aa15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 MIGA1Q8NAN2 632 aa15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 CCDC94Q9BW85 323 aaPredicted RBP15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 HSD3B7Q9H2F3 369 aa15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 ERVV-1B6SEH8 477 aa15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 SMC2O95347 1197 aa15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 LMOD1P29536 600 aaPredicted RBP15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 NLRP12P59046 1061 aa15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 PNOCQ13519 176 aa15.54■□□□□ 0.08
TUBA1B-201ENST00000332858 PPP4R3BQ5MIZ7 849 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms