RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 IL1R1P14778 569 aa12.47□□□□□ -0.41
CLP1-201ENST00000302731 ALDH1B1P30837 517 aa12.47□□□□□ -0.41
CLP1-201ENST00000302731 MECOMQ03112 1051 aa12.47□□□□□ -0.41
CLP1-201ENST00000302731 CSPP1Q1MSJ5 1256 aa12.47□□□□□ -0.41
CLP1-201ENST00000302731 POTEAQ6S8J7 498 aa12.47□□□□□ -0.41
CLP1-201ENST00000302731 MFSD6Q6ZSS7 791 aa12.47□□□□□ -0.41
CLP1-201ENST00000302731 SGMS1Q86VZ5 419 aa12.47□□□□□ -0.41
CLP1-201ENST00000302731 CERS3Q8IU89 383 aa12.47□□□□□ -0.41
CLP1-201ENST00000302731 QSER1Q2KHR3 1735 aa12.46□□□□□ -0.41
CLP1-201ENST00000302731 CHD4Q14839 1912 aa12.46□□□□□ -0.41
CLP1-201ENST00000302731 SH2B2O14492 632 aaPredicted RBP12.46□□□□□ -0.41
CLP1-201ENST00000302731 UFL1O94874 794 aa12.46□□□□□ -0.41
CLP1-201ENST00000302731 LIFRP42702 1097 aa12.46□□□□□ -0.41
CLP1-201ENST00000302731 NT5C2P49902 561 aa12.46□□□□□ -0.41
CLP1-201ENST00000302731 GSTO1P78417 241 aa12.46□□□□□ -0.41
CLP1-201ENST00000302731 CHAF1AQ13111 956 aaPredicted RBP12.46□□□□□ -0.41
CLP1-201ENST00000302731 CHST3Q7LGC8 479 aa12.46□□□□□ -0.41
CLP1-201ENST00000302731 ATP6V0A2Q9Y487 856 aa12.46□□□□□ -0.41
CLP1-201ENST00000302731 KLF18A0A0U1RQI7 1052 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 VPS37CA5D8V6 355 aaPredicted RBP12.45□□□□□ -0.42
CLP1-201ENST00000302731 PPEF1O14829 653 aaPredicted RBP12.45□□□□□ -0.42
CLP1-201ENST00000302731 JAK2O60674 1132 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 CTDNEP1O95476 244 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 LDHBP07195 334 aaKnown RBP12.45□□□□□ -0.42
CLP1-201ENST00000302731 MMP10P09238 476 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 PRDX5P30044 214 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 PPARAQ07869 468 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 CYB5R4Q7L1T6 521 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 FAM184AQ8NB25 1140 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 TBC1D16Q8TBP0 767 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 IGDCC4Q8TDY8 1250 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 CAMKK2Q96RR4 588 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 CRNKL1Q9BZJ0 848 aaKnown RBP12.45□□□□□ -0.42
CLP1-201ENST00000302731 CD209Q9NNX6 404 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 ATP8A2Q9NTI2 1148 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 NEDD4P46934 1319 aa12.45□□□□□ -0.42
CLP1-201ENST00000302731 PTPDC1A2A3K4 754 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 B4E1Z4 1266 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 LDHCP07864 332 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 FGRP09769 529 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 DZIP1Q86YF9 867 aaKnown RBP12.44□□□□□ -0.42
CLP1-201ENST00000302731 TMTC2Q8N394 836 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 FBXO41Q8TF61 875 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 MASTLQ96GX5 879 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 ZSCAN16Q9H4T2 348 aaPredicted RBP12.44□□□□□ -0.42
CLP1-201ENST00000302731 BRPF3Q9ULD4 1205 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 HPS5Q9UPZ3 1129 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 EP400Q96L91 3159 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 FSD2A1L4K1 749 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 GOLGA8BA8MQT2 603 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
CLP1-201ENST00000302731 RCAN1P53805 252 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 PPP4CP60510 307 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 CCT2P78371 535 aaKnown RBP12.44□□□□□ -0.42
CLP1-201ENST00000302731 CTDSPL2Q05D32 466 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 SART3Q15020 963 aaKnown RBP12.44□□□□□ -0.42
CLP1-201ENST00000302731 SLC15A2Q16348 729 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 SBK1Q52WX2 424 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
CLP1-201ENST00000302731 CDC37L1Q7L3B6 337 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 TBC1D22AQ8WUA7 517 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 SDR42E1Q8WUS8 393 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 GZF1Q9H116 711 aaPredicted RBP12.44□□□□□ -0.42
CLP1-201ENST00000302731 ZSWIM5Q9P217 1185 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 POLLQ9UGP5 575 aa12.44□□□□□ -0.42
CLP1-201ENST00000302731 NID2Q14112 1375 aa12.43□□□□□ -0.42
CLP1-201ENST00000302731 KDM4AO75164 1064 aa12.43□□□□□ -0.42
CLP1-201ENST00000302731 DYNLL1P63167 89 aaKnown RBP12.43□□□□□ -0.42
CLP1-201ENST00000302731 GPT2Q8TD30 523 aa12.43□□□□□ -0.42
CLP1-201ENST00000302731 LY9Q9HBG7 655 aa12.43□□□□□ -0.42
CLP1-201ENST00000302731 GPHNQ9NQX3 736 aaPredicted RBP12.43□□□□□ -0.42
CLP1-201ENST00000302731 STK32BQ9NY57 414 aa12.43□□□□□ -0.42
CLP1-201ENST00000302731 FAM205AQ6ZU69 1335 aa12.43□□□□□ -0.42
CLP1-201ENST00000302731 GOLGA6L3A6NEY3 463 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 H3BQV1 296 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 CDKL5O76039 1030 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 BAG3O95817 575 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 KRT85P78386 507 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 TMEM67Q5HYA8 995 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 IFFO2Q5TF58 517 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 CPLX2Q6PUV4 134 aaKnown RBP12.42□□□□□ -0.42
CLP1-201ENST00000302731 APOA5Q6Q788 366 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 USP48Q86UV5 1035 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 ESR2Q92731 530 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 FAM163AQ96GL9 167 aaPredicted RBP12.42□□□□□ -0.42
CLP1-201ENST00000302731 CHAMP1Q96JM3 812 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 COA1Q9GZY4 146 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 TMX4Q9H1E5 349 aaPredicted RBP12.42□□□□□ -0.42
CLP1-201ENST00000302731 NCOA5Q9HCD5 579 aaKnown RBP12.42□□□□□ -0.42
CLP1-201ENST00000302731 DCP1AQ9NPI6 582 aaPredicted RBP12.42□□□□□ -0.42
CLP1-201ENST00000302731 AATFQ9NY61 560 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLP1-201ENST00000302731 ARPP21Q9UBL0 812 aaPredicted RBP12.42□□□□□ -0.42
CLP1-201ENST00000302731 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
CLP1-201ENST00000302731 SUGT1Q9Y2Z0 365 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 TACC3Q9Y6A5 838 aa12.42□□□□□ -0.42
CLP1-201ENST00000302731 ERICH2A1L162 156 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 CPLX1O14810 134 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 IFIT3O14879 490 aaKnown RBP12.41□□□□□ -0.42
CLP1-201ENST00000302731 ZNF445P59923 1031 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 UBE2HP62256 183 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms