RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 SLIT2O94813 1529 aa15.82■□□□□ 0.12
BCCIP-202ENST00000299130 LRP6O75581 1613 aa15.82■□□□□ 0.12
BCCIP-202ENST00000299130 RANBP6O60518 1105 aaKnown RBP15.82■□□□□ 0.12
BCCIP-202ENST00000299130 ARID4AP29374 1257 aaPredicted RBP15.82■□□□□ 0.12
BCCIP-202ENST00000299130 CTDSPL2Q05D32 466 aa15.82■□□□□ 0.12
BCCIP-202ENST00000299130 TTF1Q15361 905 aaPredicted RBP15.82■□□□□ 0.12
BCCIP-202ENST00000299130 PPP4R3BQ5MIZ7 849 aa15.82■□□□□ 0.12
BCCIP-202ENST00000299130 KRT40Q6A162 431 aa15.82■□□□□ 0.12
BCCIP-202ENST00000299130 IGDCC4Q8TDY8 1250 aa15.82■□□□□ 0.12
BCCIP-202ENST00000299130 ANKRD7Q92527 254 aa15.82■□□□□ 0.12
BCCIP-202ENST00000299130 EPB41L4AQ9HCS5 686 aaPredicted RBP15.82■□□□□ 0.12
BCCIP-202ENST00000299130 FAM217BQ9NTX9 383 aaPredicted RBP15.82■□□□□ 0.12
BCCIP-202ENST00000299130 PDE8AO60658 829 aa15.81■□□□□ 0.12
BCCIP-202ENST00000299130 SLC3A2P08195 630 aaKnown RBP15.81■□□□□ 0.12
BCCIP-202ENST00000299130 SLC39A14Q15043 492 aa15.81■□□□□ 0.12
BCCIP-202ENST00000299130 VPS37DQ86XT2 251 aa15.81■□□□□ 0.12
BCCIP-202ENST00000299130 ZNF592Q92610 1267 aa15.81■□□□□ 0.12
BCCIP-202ENST00000299130 NAT10Q9H0A0 1025 aaKnown RBP15.81■□□□□ 0.12
BCCIP-202ENST00000299130 MYH3P11055 1940 aa15.81■□□□□ 0.12
BCCIP-202ENST00000299130 SMTNL1A8MU46 457 aa15.8■□□□□ 0.12
BCCIP-202ENST00000299130 CMA1P23946 247 aa15.8■□□□□ 0.12
BCCIP-202ENST00000299130 NTRK3Q16288 839 aa15.8■□□□□ 0.12
BCCIP-202ENST00000299130 SYTL4Q96C24 671 aaPredicted RBP15.8■□□□□ 0.12
BCCIP-202ENST00000299130 XPO4Q9C0E2 1151 aaKnown RBP15.8■□□□□ 0.12
BCCIP-202ENST00000299130 TRMT1Q9NXH9 659 aaKnown RBP15.8■□□□□ 0.12
BCCIP-202ENST00000299130 NUP98P52948 1817 aa15.8■□□□□ 0.12
BCCIP-202ENST00000299130 ECM29Q5VYK3 1845 aa15.8■□□□□ 0.12
BCCIP-202ENST00000299130 FGFR2P21802 821 aa15.8■□□□□ 0.12
BCCIP-202ENST00000299130 NCAPHQ15003 741 aa15.8■□□□□ 0.12
BCCIP-202ENST00000299130 PKNOX2Q96KN3 472 aa15.8■□□□□ 0.12
BCCIP-202ENST00000299130 LY9Q9HBG7 655 aa15.8■□□□□ 0.12
BCCIP-202ENST00000299130 IFNKQ9P0W0 207 aa15.8■□□□□ 0.12
BCCIP-202ENST00000299130 KAT6BQ8WYB5 2073 aa15.8■□□□□ 0.12
BCCIP-202ENST00000299130 BCL9O00512 1426 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 NLRP12P59046 1061 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 NCBP1Q09161 790 aaKnown RBP15.79■□□□□ 0.12
BCCIP-202ENST00000299130 PTPAQ15257 358 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 CEP135Q66GS9 1140 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 SHC4Q6S5L8 630 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 DZIP3Q86Y13 1208 aaKnown RBP15.79■□□□□ 0.12
BCCIP-202ENST00000299130 AIDAQ96BJ3 306 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 CLIC6Q96NY7 704 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 ANKRD36CQ5JPF3 1778 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 PRKAB2O43741 272 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 NFXL1Q6ZNB6 911 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 PDCL2Q8N4E4 241 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 MAGEB6Q8N7X4 407 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 MAP3K14Q99558 947 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 ARMT1Q9H993 441 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 ZSWIM5Q9P217 1185 aa15.79■□□□□ 0.12
BCCIP-202ENST00000299130 MBD4O95243 580 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 RASGRF1Q13972 1273 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 TMEM67Q5HYA8 995 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 IFNL3Q8IZI9 196 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 STK11IPQ8N1F8 1099 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 SPATA5Q8NB90 893 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 BPIFA3Q9BQP9 254 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 PRDM10Q9NQV6 1147 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 SEC31BQ9NQW1 1179 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 ZBTB43O43298 467 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 NEMFO60524 1076 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 SMC2O95347 1197 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 PUM3Q15397 648 aaKnown RBP15.78■□□□□ 0.12
BCCIP-202ENST00000299130 NYAP1Q6ZVC0 841 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 HSD3B7Q9H2F3 369 aa15.78■□□□□ 0.12
BCCIP-202ENST00000299130 GOLGA8AA7E2F4 631 aa15.77■□□□□ 0.12
BCCIP-202ENST00000299130 UQCRFS1P1P0C7P4 283 aa15.77■□□□□ 0.12
BCCIP-202ENST00000299130 GUCY1A2P33402 732 aa15.77■□□□□ 0.12
BCCIP-202ENST00000299130 CBX1P83916 185 aa15.77■□□□□ 0.12
BCCIP-202ENST00000299130 ZRSR1Q15695 479 aaKnown RBP15.77■□□□□ 0.12
BCCIP-202ENST00000299130 SUSD4Q5VX71 490 aa15.77■□□□□ 0.12
BCCIP-202ENST00000299130 ARMCX5Q6P1M9 558 aa15.77■□□□□ 0.12
BCCIP-202ENST00000299130 LPIN2Q92539 896 aa15.77■□□□□ 0.12
BCCIP-202ENST00000299130 HPSEQ9Y251 543 aa15.77■□□□□ 0.12
BCCIP-202ENST00000299130 PATL2C9JE40 543 aaKnown RBP15.77■□□□□ 0.11
BCCIP-202ENST00000299130 LMOD1P29536 600 aaPredicted RBP15.77■□□□□ 0.11
BCCIP-202ENST00000299130 IARSP41252 1262 aaKnown RBP15.77■□□□□ 0.11
BCCIP-202ENST00000299130 SYKP43405 635 aa15.77■□□□□ 0.11
BCCIP-202ENST00000299130 PNOCQ13519 176 aa15.77■□□□□ 0.11
BCCIP-202ENST00000299130 TMC6Q7Z403 805 aa15.77■□□□□ 0.11
BCCIP-202ENST00000299130 CCAR2Q8N163 923 aaKnown RBP15.77■□□□□ 0.11
BCCIP-202ENST00000299130 CCDC112Q8NEF3 446 aa15.77■□□□□ 0.11
BCCIP-202ENST00000299130 TMEM87BQ96K49 555 aa15.77■□□□□ 0.11
BCCIP-202ENST00000299130 ZKSCAN3Q9BRR0 538 aa15.77■□□□□ 0.11
BCCIP-202ENST00000299130 OSBPL5Q9H0X9 879 aaPredicted RBP15.77■□□□□ 0.11
BCCIP-202ENST00000299130 PAXBP1Q9Y5B6 917 aa15.77■□□□□ 0.11
BCCIP-202ENST00000299130 ATP1A3P13637 1013 aa15.76■□□□□ 0.11
BCCIP-202ENST00000299130 U2AF2P26368 475 aaKnown RBP eCLIP15.76■□□□□ 0.112e-6■■■■□ 19.5
BCCIP-202ENST00000299130 SGMS1Q86VZ5 419 aa15.76■□□□□ 0.11
BCCIP-202ENST00000299130 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.76■□□□□ 0.11
BCCIP-202ENST00000299130 SLC26A6Q9BXS9 759 aa15.76■□□□□ 0.11
BCCIP-202ENST00000299130 SPDYE4A6NLX3 237 aa15.76■□□□□ 0.11
BCCIP-202ENST00000299130 GSG1L2A8MUP6 293 aa15.76■□□□□ 0.11
BCCIP-202ENST00000299130 IFIT3O14879 490 aaKnown RBP15.76■□□□□ 0.11
BCCIP-202ENST00000299130 CDKL5O76039 1030 aa15.76■□□□□ 0.11
BCCIP-202ENST00000299130 GNL2Q13823 731 aaKnown RBP15.76■□□□□ 0.11
BCCIP-202ENST00000299130 PTPN14Q15678 1187 aa15.76■□□□□ 0.11
BCCIP-202ENST00000299130 ALX1Q15699 326 aa15.76■□□□□ 0.11
BCCIP-202ENST00000299130 SPECC1Q5M775 1068 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms