RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 B4E1Z4 1266 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 STARD3NLO95772 234 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 PHKA1P46020 1223 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 UBE3CQ15386 1083 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 KRT40Q6A162 431 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 APOA5Q6Q788 366 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 VPS37DQ86XT2 251 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 PHKBQ93100 1093 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 INCENPQ9NQS7 918 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 IMPACTQ9P2X3 320 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 PRDM4Q9UKN5 801 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 WWC3Q9ULE0 1092 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 TCRBV5S4A2TA0A5A2 114 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 APPP05067 770 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 PDE6AP16499 860 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 RGS22Q8NE09 1264 aa19.3■□□□□ 0.68
RPN1-201ENST00000296255 PDE8BO95263 885 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 SMC2O95347 1197 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 EVA1CP58658 441 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 PTPAQ15257 358 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 TTF1Q15361 905 aaPredicted RBP19.29■□□□□ 0.68
RPN1-201ENST00000296255 CCDC102BQ68D86 513 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 ARMCX5Q6P1M9 558 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 MYH3P11055 1940 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 IRS4O14654 1257 aaPredicted RBP19.29■□□□□ 0.68
RPN1-201ENST00000296255 ZSCAN20P17040 1043 aaPredicted RBP19.29■□□□□ 0.68
RPN1-201ENST00000296255 NTRK3Q16288 839 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 ISM2Q6H9L7 571 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 SHC4Q6S5L8 630 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 IGDCC4Q8TDY8 1250 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 HSD3B7Q9H2F3 369 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 TAOK2Q9UL54 1235 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 HPSEQ9Y251 543 aa19.29■□□□□ 0.68
RPN1-201ENST00000296255 TMC6Q7Z403 805 aa19.28■□□□□ 0.68
RPN1-201ENST00000296255 MICU3Q86XE3 530 aa19.28■□□□□ 0.68
RPN1-201ENST00000296255 SLC4A9Q96Q91 983 aa19.28■□□□□ 0.68
RPN1-201ENST00000296255 MAP3K14Q99558 947 aa19.28■□□□□ 0.68
RPN1-201ENST00000296255 FAM217BQ9NTX9 383 aaPredicted RBP19.28■□□□□ 0.68
RPN1-201ENST00000296255 UBE2Q2LH0YL09 131 aa19.28■□□□□ 0.68
RPN1-201ENST00000296255 RANBP6O60518 1105 aaKnown RBP19.28■□□□□ 0.68
RPN1-201ENST00000296255 ARID4AP29374 1257 aaPredicted RBP19.28■□□□□ 0.68
RPN1-201ENST00000296255 TIGD1Q96MW7 591 aa19.28■□□□□ 0.68
RPN1-201ENST00000296255 STRBPQ96SI9 672 aaKnown RBP19.28■□□□□ 0.68
RPN1-201ENST00000296255 BCL11BQ9C0K0 894 aaPredicted RBP19.28■□□□□ 0.68
RPN1-201ENST00000296255 LY9Q9HBG7 655 aa19.28■□□□□ 0.68
RPN1-201ENST00000296255 CDKL5O76039 1030 aa19.27■□□□□ 0.68
RPN1-201ENST00000296255 SYKP43405 635 aa19.27■□□□□ 0.68
RPN1-201ENST00000296255 E4F1Q66K89 784 aaPredicted RBP19.27■□□□□ 0.68
RPN1-201ENST00000296255 MYL10Q9BUA6 226 aa19.27■□□□□ 0.68
RPN1-201ENST00000296255 TUBE1Q9UJT0 475 aa19.27■□□□□ 0.68
RPN1-201ENST00000296255 ANKRD36CQ5JPF3 1778 aa19.27■□□□□ 0.68
RPN1-201ENST00000296255 ITGB4P16144 1822 aa19.27■□□□□ 0.67
RPN1-201ENST00000296255 PPP6R2O75170 966 aa19.26■□□□□ 0.67
RPN1-201ENST00000296255 TRMT112Q9UI30 125 aaKnown RBP19.26■□□□□ 0.67
RPN1-201ENST00000296255 TACC3Q9Y6A5 838 aa19.26■□□□□ 0.67
RPN1-201ENST00000296255 LRP6O75581 1613 aa19.26■□□□□ 0.67
RPN1-201ENST00000296255 LMOD1P29536 600 aaPredicted RBP19.26■□□□□ 0.67
RPN1-201ENST00000296255 HSPA2P54652 639 aa19.26■□□□□ 0.67
RPN1-201ENST00000296255 HELBQ8NG08 1087 aaPredicted RBP19.26■□□□□ 0.67
RPN1-201ENST00000296255 TMEM87BQ96K49 555 aa19.26■□□□□ 0.67
RPN1-201ENST00000296255 ZNF215Q9UL58 517 aaPredicted RBP19.26■□□□□ 0.67
RPN1-201ENST00000296255 UBN2Q6ZU65 1347 aa19.26■□□□□ 0.67
RPN1-201ENST00000296255 ZBTB43O43298 467 aa19.25■□□□□ 0.67
RPN1-201ENST00000296255 CYP19A1P11511 503 aaPredicted RBP19.25■□□□□ 0.67
RPN1-201ENST00000296255 ATP1A3P13637 1013 aa19.25■□□□□ 0.67
RPN1-201ENST00000296255 CLIC6Q96NY7 704 aa19.25■□□□□ 0.67
RPN1-201ENST00000296255 EPB41L4AQ9HCS5 686 aaPredicted RBP19.25■□□□□ 0.67
RPN1-201ENST00000296255 FAM237AA0A1B0GTK4 181 aa19.25■□□□□ 0.67
RPN1-201ENST00000296255 IKBKBO14920 756 aa19.25■□□□□ 0.67
RPN1-201ENST00000296255 RESP18Q5W5W9 173 aa19.25■□□□□ 0.67
RPN1-201ENST00000296255 SGMS1Q86VZ5 419 aa19.25■□□□□ 0.67
RPN1-201ENST00000296255 CCDC150Q8NCX0 1101 aa19.25■□□□□ 0.67
RPN1-201ENST00000296255 TBC1D2BQ9UPU7 963 aa19.25■□□□□ 0.67
RPN1-201ENST00000296255 FGFR2P21802 821 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 IARSP41252 1262 aaKnown RBP19.24■□□□□ 0.67
RPN1-201ENST00000296255 FANCCQ00597 558 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 PNOCQ13519 176 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 ALX1Q15699 326 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 TMEM67Q5HYA8 995 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.24■□□□□ 0.67
RPN1-201ENST00000296255 SLAIN2Q9P270 581 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 ZBTB1Q9Y2K1 713 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 GOLGA8AA7E2F4 631 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 PDE8AO60658 829 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 UQCRFS1P1P0C7P4 283 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 CPLX2Q6PUV4 134 aaKnown RBP19.24■□□□□ 0.67
RPN1-201ENST00000296255 NFXL1Q6ZNB6 911 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 AIDAQ96BJ3 306 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 ZSWIM5Q9P217 1185 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 NUP98P52948 1817 aa19.24■□□□□ 0.67
RPN1-201ENST00000296255 TPM4P67936 248 aa19.23■□□□□ 0.67
RPN1-201ENST00000296255 CTDSPL2Q05D32 466 aa19.23■□□□□ 0.67
RPN1-201ENST00000296255 DMTNQ08495 405 aa19.23■□□□□ 0.67
RPN1-201ENST00000296255 GNL2Q13823 731 aaKnown RBP19.23■□□□□ 0.67
RPN1-201ENST00000296255 PPP1R13BQ96KQ4 1090 aa19.23■□□□□ 0.67
RPN1-201ENST00000296255 SFPQP23246 707 aaKnown RBP eCLIP19.23■□□□□ 0.67
RPN1-201ENST00000296255 PUM3Q15397 648 aaKnown RBP19.23■□□□□ 0.67
RPN1-201ENST00000296255 METTL16Q86W50 562 aaKnown RBP19.23■□□□□ 0.67
RPN1-201ENST00000296255 IFNL3Q8IZI9 196 aa19.23■□□□□ 0.67
RPN1-201ENST00000296255 JMYQ8N9B5 988 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms