RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 SYT17Q9BSW7 474 aa13.55□□□□□ -0.24
XRCC4-201ENST00000282268 CRNKL1Q9BZJ0 848 aaKnown RBP13.55□□□□□ -0.24
XRCC4-201ENST00000282268 COL4A5P29400 1685 aa13.55□□□□□ -0.24
XRCC4-201ENST00000282268 MINDY4BA8MYZ0 360 aa13.54□□□□□ -0.24
XRCC4-201ENST00000282268 PSMD14O00487 310 aa13.54□□□□□ -0.24
XRCC4-201ENST00000282268 ST18O60284 1047 aa13.54□□□□□ -0.24
XRCC4-201ENST00000282268 BAG3O95817 575 aa13.54□□□□□ -0.24
XRCC4-201ENST00000282268 USP5P45974 858 aa13.54□□□□□ -0.24
XRCC4-201ENST00000282268 COL9A3Q14050 684 aaPredicted RBP13.54□□□□□ -0.24
XRCC4-201ENST00000282268 STOX1Q6ZVD7 989 aa13.54□□□□□ -0.24
XRCC4-201ENST00000282268 JDP2Q8WYK2 163 aa13.54□□□□□ -0.24
XRCC4-201ENST00000282268 TCEANC2Q96MN5 208 aa13.54□□□□□ -0.24
XRCC4-201ENST00000282268 ZNRF3Q9ULT6 936 aa13.54□□□□□ -0.24
XRCC4-201ENST00000282268 MAST2Q6P0Q8 1798 aa13.54□□□□□ -0.24
XRCC4-201ENST00000282268 CYP2D7A0A087X1C5 515 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 E7EWF7 191 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 PSMA5P28066 241 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 CTDSPL2Q05D32 466 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 INCENPQ9NQS7 918 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 PDRG1Q9NUG6 133 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
XRCC4-201ENST00000282268 DAGLAQ9Y4D2 1042 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 CYP46A1Q9Y6A2 500 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
XRCC4-201ENST00000282268 CRKP46108 304 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 BLOC1S2Q6QNY1 142 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 TEX11Q8IYF3 940 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 TGFBRAP1Q8WUH2 860 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 NEK1Q96PY6 1258 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 VPS33BQ9H267 617 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 PCDHAC2Q9Y5I4 1007 aa13.53□□□□□ -0.24
XRCC4-201ENST00000282268 CCDC88AQ3V6T2 1871 aa13.52□□□□□ -0.25
XRCC4-201ENST00000282268 PRELPP51888 382 aa13.52□□□□□ -0.25
XRCC4-201ENST00000282268 KRT32Q14532 448 aa13.52□□□□□ -0.25
XRCC4-201ENST00000282268 ALX1Q15699 326 aa13.52□□□□□ -0.25
XRCC4-201ENST00000282268 CHST3Q7LGC8 479 aa13.52□□□□□ -0.25
XRCC4-201ENST00000282268 MAPKAPK5Q8IW41 473 aa13.52□□□□□ -0.25
XRCC4-201ENST00000282268 SNX21Q969T3 373 aa13.52□□□□□ -0.25
XRCC4-201ENST00000282268 TEKT1Q969V4 418 aa13.52□□□□□ -0.25
XRCC4-201ENST00000282268 LRRC2Q9BYS8 371 aa13.52□□□□□ -0.25
XRCC4-201ENST00000282268 SAP30BPQ9UHR5 308 aaKnown RBP13.52□□□□□ -0.25
XRCC4-201ENST00000282268 SUGT1Q9Y2Z0 365 aa13.52□□□□□ -0.25
XRCC4-201ENST00000282268 GPR75-ASB3A0A0A6YYF3 556 aa13.51□□□□□ -0.25
XRCC4-201ENST00000282268 SMIM22K7EJ46 135 aa13.51□□□□□ -0.25
XRCC4-201ENST00000282268 CYP2D6P10635 497 aa13.51□□□□□ -0.25
XRCC4-201ENST00000282268 RRP12Q5JTH9 1297 aaKnown RBP13.51□□□□□ -0.25
XRCC4-201ENST00000282268 RSBN1LQ6PCB5 846 aaPredicted RBP13.51□□□□□ -0.25
XRCC4-201ENST00000282268 RUFY3Q7L099 469 aa13.51□□□□□ -0.25
XRCC4-201ENST00000282268 TBC1D10CQ8IV04 446 aa13.51□□□□□ -0.25
XRCC4-201ENST00000282268 NBPF3Q9H094 633 aa13.51□□□□□ -0.25
XRCC4-201ENST00000282268 ZSWIM6Q9HCJ5 1215 aa13.51□□□□□ -0.25
XRCC4-201ENST00000282268 TOMM22Q9NS69 142 aa13.51□□□□□ -0.25
XRCC4-201ENST00000282268 USP40Q9NVE5 1235 aa13.51□□□□□ -0.25
XRCC4-201ENST00000282268 SCN9AQ15858 1988 aa13.51□□□□□ -0.25
XRCC4-201ENST00000282268 USP17L8P0C7I0 530 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 RPS6KB1P23443 525 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 AK2P54819 239 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 FKBP1AP62942 108 aaKnown RBP13.5□□□□□ -0.25
XRCC4-201ENST00000282268 EVX2Q03828 476 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 CXCL9Q07325 125 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 PICALMQ13492 652 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 TSGA10IPQ3SY00 556 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 CIAPIN1Q6FI81 312 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 TMED8Q6PL24 325 aaPredicted RBP13.5□□□□□ -0.25
XRCC4-201ENST00000282268 IL17RAQ96F46 866 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 TM6SF1Q9BZW5 370 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 DCP1AQ9NPI6 582 aaPredicted RBP13.5□□□□□ -0.25
XRCC4-201ENST00000282268 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 RPAP1Q9BWH6 1393 aaPredicted RBP13.5□□□□□ -0.25
XRCC4-201ENST00000282268 GAKO14976 1311 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 USP17L12C9JPN9 530 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 USP17L21D6R901 530 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 K7ELQ4 463 aaPredicted RBP13.5□□□□□ -0.25
XRCC4-201ENST00000282268 IGSF3O75054 1194 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 HSP90AA1P07900 732 aaKnown RBP13.5□□□□□ -0.25
XRCC4-201ENST00000282268 VIL1P09327 827 aaKnown RBP13.5□□□□□ -0.25
XRCC4-201ENST00000282268 PPP4CP60510 307 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 FGD1P98174 961 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 PPARAQ07869 468 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 CTR9Q6PD62 1173 aa13.5□□□□□ -0.25
XRCC4-201ENST00000282268 RALYLQ86SE5 291 aaKnown RBP13.5□□□□□ -0.25
XRCC4-201ENST00000282268 FAM163AQ96GL9 167 aaPredicted RBP13.5□□□□□ -0.25
XRCC4-201ENST00000282268 MYH2Q9UKX2 1941 aa13.49□□□□□ -0.25
XRCC4-201ENST00000282268 FER1L6Q2WGJ9 1857 aa13.49□□□□□ -0.25
XRCC4-201ENST00000282268 ADAMTSL1Q8N6G6 1762 aa13.49□□□□□ -0.25
XRCC4-201ENST00000282268 PLCG2P16885 1265 aa13.49□□□□□ -0.25
XRCC4-201ENST00000282268 YBX3P16989 372 aaKnown RBP eCLIP13.49□□□□□ -0.25
XRCC4-201ENST00000282268 CACNB3P54284 484 aa13.49□□□□□ -0.25
XRCC4-201ENST00000282268 RHBDL3P58872 404 aa13.49□□□□□ -0.25
XRCC4-201ENST00000282268 TTC14Q96N46 770 aa13.49□□□□□ -0.25
XRCC4-201ENST00000282268 ATP8A2Q9NTI2 1148 aa13.49□□□□□ -0.25
XRCC4-201ENST00000282268 TACC3Q9Y6A5 838 aa13.49□□□□□ -0.25
XRCC4-201ENST00000282268 LTBP3Q9NS15 1303 aa13.48□□□□□ -0.25
XRCC4-201ENST00000282268 POLR3DP05423 398 aaPredicted RBP13.48□□□□□ -0.25
XRCC4-201ENST00000282268 EIF6P56537 245 aaKnown RBP13.48□□□□□ -0.25
XRCC4-201ENST00000282268 TRDNQ13061 729 aa13.48□□□□□ -0.25
XRCC4-201ENST00000282268 CFAP100Q494V2 611 aa13.48□□□□□ -0.25
XRCC4-201ENST00000282268 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms