RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 LAMB1P07942 1786 aa17.19■□□□□ 0.34
TRIM23-202ENST00000274327 ZNF646O15015 1829 aaPredicted RBP17.19■□□□□ 0.34
TRIM23-202ENST00000274327 KCNA3P22001 575 aa17.19■□□□□ 0.34
TRIM23-202ENST00000274327 MCM5P33992 734 aa17.19■□□□□ 0.34
TRIM23-202ENST00000274327 ANTXR2P58335 489 aa17.19■□□□□ 0.34
TRIM23-202ENST00000274327 UPF1Q92900 1129 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRIM23-202ENST00000274327 TACC3Q9Y6A5 838 aa17.19■□□□□ 0.34
TRIM23-202ENST00000274327 LDHCP07864 332 aa17.18■□□□□ 0.34
TRIM23-202ENST00000274327 PPP4CP60510 307 aa17.18■□□□□ 0.34
TRIM23-202ENST00000274327 MFSD14BQ5SR56 506 aa17.18■□□□□ 0.34
TRIM23-202ENST00000274327 RALYLQ86SE5 291 aaKnown RBP17.18■□□□□ 0.34
TRIM23-202ENST00000274327 STAG1Q8WVM7 1258 aa17.18■□□□□ 0.34
TRIM23-202ENST00000274327 TNPO1Q92973 898 aaKnown RBP17.18■□□□□ 0.34
TRIM23-202ENST00000274327 BRF1Q92994 677 aa17.18■□□□□ 0.34
TRIM23-202ENST00000274327 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
TRIM23-202ENST00000274327 MTFR1LQ9H019 292 aa17.18■□□□□ 0.34
TRIM23-202ENST00000274327 ANAPC4Q9UJX5 808 aa17.18■□□□□ 0.34
TRIM23-202ENST00000274327 SUGT1Q9Y2Z0 365 aa17.18■□□□□ 0.34
TRIM23-202ENST00000274327 CDK5RAP2Q96SN8 1893 aa17.18■□□□□ 0.34
TRIM23-202ENST00000274327 MROH7-TTC4A0A0A0MT08 1334 aa17.18■□□□□ 0.34
TRIM23-202ENST00000274327 PRC1O43663 620 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 ZBTB7AO95365 584 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 GTF2IP78347 998 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 CTDSPL2Q05D32 466 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 TRDNQ13061 729 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 AKNAD1Q5T1N1 836 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 TTLL6Q8N841 843 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 FAM163AQ96GL9 167 aaPredicted RBP17.17■□□□□ 0.34
TRIM23-202ENST00000274327 NEDD4P46934 1319 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 DPEP1P16444 411 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 EVCP57679 992 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 PPARAQ07869 468 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 DIXDC1Q155Q3 683 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 DOK7Q18PE1 504 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 GRIPAP1Q4V328 841 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 CHST3Q7LGC8 479 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 NECAB1Q8N987 351 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 NKX2-3Q8TAU0 364 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 ATP8A2Q9NTI2 1148 aa17.17■□□□□ 0.34
TRIM23-202ENST00000274327 PKP1Q13835 747 aa17.16■□□□□ 0.34
TRIM23-202ENST00000274327 PODNQ7Z5L7 613 aa17.16■□□□□ 0.34
TRIM23-202ENST00000274327 GTF3C6Q969F1 213 aa17.16■□□□□ 0.34
TRIM23-202ENST00000274327 DCP1AQ9NPI6 582 aaPredicted RBP17.16■□□□□ 0.34
TRIM23-202ENST00000274327 ZNF219Q9P2Y4 722 aaPredicted RBP17.16■□□□□ 0.34
TRIM23-202ENST00000274327 ZDHHC9Q9Y397 364 aa17.16■□□□□ 0.34
TRIM23-202ENST00000274327 SCN9AQ15858 1988 aa17.16■□□□□ 0.34
TRIM23-202ENST00000274327 GAKO14976 1311 aa17.16■□□□□ 0.34
TRIM23-202ENST00000274327 PFKFB2O60825 505 aa17.15■□□□□ 0.34
TRIM23-202ENST00000274327 FGD1P98174 961 aa17.15■□□□□ 0.34
TRIM23-202ENST00000274327 APOBRQ0VD83 1088 aa17.15■□□□□ 0.34
TRIM23-202ENST00000274327 CYB5R4Q7L1T6 521 aa17.15■□□□□ 0.34
TRIM23-202ENST00000274327 CERS3Q8IU89 383 aa17.15■□□□□ 0.34
TRIM23-202ENST00000274327 SUPT20HQ8NEM7 779 aa17.15■□□□□ 0.34
TRIM23-202ENST00000274327 CNNM2Q9H8M5 875 aa17.15■□□□□ 0.34
TRIM23-202ENST00000274327 SMC3Q9UQE7 1217 aa17.15■□□□□ 0.34
TRIM23-202ENST00000274327 NAV1Q8NEY1 1877 aa17.15■□□□□ 0.34
TRIM23-202ENST00000274327 BRCA1P38398 1863 aaKnown RBP17.15■□□□□ 0.34
TRIM23-202ENST00000274327 GPR75-ASB3A0A0A6YYF3 556 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 B4E1Z4 1266 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 BAG3O95817 575 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 POLD1P28340 1107 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 TGFB2P61812 414 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 CTR9Q6PD62 1173 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 CLEC17AQ6ZS10 378 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 MFSD6Q6ZSS7 791 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 SLF2Q8IX21 1173 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 CERS5Q8N5B7 392 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 ZNF274Q96GC6 653 aaPredicted RBP17.14■□□□□ 0.34
TRIM23-202ENST00000274327 KRT23Q9C075 422 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 INCENPQ9NQS7 918 aa17.14■□□□□ 0.34
TRIM23-202ENST00000274327 ATF5Q9Y2D1 282 aaPredicted RBP17.14■□□□□ 0.34
TRIM23-202ENST00000274327 C21orf2O43822 256 aa17.14■□□□□ 0.33
TRIM23-202ENST00000274327 BRD1O95696 1058 aa17.14■□□□□ 0.33
TRIM23-202ENST00000274327 KIAA2012Q0VF49 1180 aa17.14■□□□□ 0.33
TRIM23-202ENST00000274327 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
TRIM23-202ENST00000274327 SBK1Q52WX2 424 aa17.14■□□□□ 0.33
TRIM23-202ENST00000274327 RNF41Q9H4P4 317 aaPredicted RBP17.14■□□□□ 0.33
TRIM23-202ENST00000274327 GPHNQ9NQX3 736 aaPredicted RBP17.14■□□□□ 0.33
TRIM23-202ENST00000274327 MKRN1Q9UHC7 482 aaKnown RBP17.14■□□□□ 0.33
TRIM23-202ENST00000274327 FOCADQ5VW36 1801 aa17.14■□□□□ 0.33
TRIM23-202ENST00000274327 PSME4Q14997 1843 aa17.13■□□□□ 0.33
TRIM23-202ENST00000274327 G3V3G9 751 aa17.13■□□□□ 0.33
TRIM23-202ENST00000274327 FGRP09769 529 aa17.13■□□□□ 0.33
TRIM23-202ENST00000274327 FKBP1AP62942 108 aaKnown RBP17.13■□□□□ 0.33
TRIM23-202ENST00000274327 STK3Q13188 491 aa17.13■□□□□ 0.33
TRIM23-202ENST00000274327 CCDC93Q567U6 631 aa17.13■□□□□ 0.33
TRIM23-202ENST00000274327 DCAF8Q5TAQ9 597 aa17.13■□□□□ 0.33
TRIM23-202ENST00000274327 SH3RF3Q8TEJ3 882 aaPredicted RBP17.13■□□□□ 0.33
TRIM23-202ENST00000274327 NOL10Q9BSC4 688 aaKnown RBP17.13■□□□□ 0.33
TRIM23-202ENST00000274327 DBNDD1Q9H9R9 158 aa17.13■□□□□ 0.33
TRIM23-202ENST00000274327 MINDY4BA8MYZ0 360 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 SH2B2O14492 632 aaPredicted RBP17.12■□□□□ 0.33
TRIM23-202ENST00000274327 GJB2P29033 226 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 MCM4P33991 863 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 BTDP43251 543 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 SCRN1Q12765 414 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 TMEM87BQ96K49 555 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 SGIP1Q9BQI5 828 aa17.12■□□□□ 0.33
TRIM23-202ENST00000274327 ARPP21Q9UBL0 812 aaPredicted RBP17.12■□□□□ 0.33
TRIM23-202ENST00000274327 DDX60LQ5H9U9 1706 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms