RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 CBFA2T2O43439 604 aa27.4■■□□□ 1.98
RETREG2-201ENST00000273048 TADA3O75528 432 aa27.4■■□□□ 1.98
RETREG2-201ENST00000273048 ZRANB2O95218 330 aaKnown RBP eCLIP27.4■■□□□ 1.98
RETREG2-201ENST00000273048 PTPAQ15257 358 aa27.4■■□□□ 1.98
RETREG2-201ENST00000273048 KRT40Q6A162 431 aa27.4■■□□□ 1.98
RETREG2-201ENST00000273048 METTL16Q86W50 562 aaKnown RBP27.4■■□□□ 1.98
RETREG2-201ENST00000273048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.4■■□□□ 1.98
RETREG2-201ENST00000273048 PARP3Q9Y6F1 533 aa27.4■■□□□ 1.98
RETREG2-201ENST00000273048 GPAA1O43292 621 aa27.39■■□□□ 1.98
RETREG2-201ENST00000273048 CIAO1O76071 339 aa27.39■■□□□ 1.98
RETREG2-201ENST00000273048 TMCO3Q6UWJ1 677 aa27.39■■□□□ 1.98
RETREG2-201ENST00000273048 FOXP4Q8IVH2 680 aaPredicted RBP27.39■■□□□ 1.98
RETREG2-201ENST00000273048 NBPF3Q9H094 633 aa27.39■■□□□ 1.98
RETREG2-201ENST00000273048 GNL2Q13823 731 aaKnown RBP27.39■■□□□ 1.97
RETREG2-201ENST00000273048 LONRF3Q496Y0 759 aa27.39■■□□□ 1.97
RETREG2-201ENST00000273048 APPBP2Q92624 585 aa27.39■■□□□ 1.97
RETREG2-201ENST00000273048 SENP2Q9HC62 589 aa27.39■■□□□ 1.97
RETREG2-201ENST00000273048 INTS13Q9NVM9 706 aa27.39■■□□□ 1.97
RETREG2-201ENST00000273048 VWA3AA6NCI4 1184 aa27.38■■□□□ 1.97
RETREG2-201ENST00000273048 CDC27P30260 824 aa27.38■■□□□ 1.97
RETREG2-201ENST00000273048 TJP1Q07157 1748 aa27.38■■□□□ 1.97
RETREG2-201ENST00000273048 SPEF2Q9C093 1822 aa27.38■■□□□ 1.97
RETREG2-201ENST00000273048 PDE4BQ07343 736 aa27.38■■□□□ 1.97
RETREG2-201ENST00000273048 TMEM139Q8IV31 216 aa27.38■■□□□ 1.97
RETREG2-201ENST00000273048 C4AP0C0L4 1744 aa27.38■■□□□ 1.97
RETREG2-201ENST00000273048 C4BP0C0L5 1744 aa27.38■■□□□ 1.97
RETREG2-201ENST00000273048 FOXN1O15353 648 aa27.37■■□□□ 1.97
RETREG2-201ENST00000273048 ZFYP08048 801 aaPredicted RBP27.37■■□□□ 1.97
RETREG2-201ENST00000273048 METAP2P50579 478 aaKnown RBP eCLIP27.37■■□□□ 1.97
RETREG2-201ENST00000273048 LRRFIP1Q32MZ4 808 aaKnown RBP27.37■■□□□ 1.97
RETREG2-201ENST00000273048 CYB5R4Q7L1T6 521 aa27.37■■□□□ 1.97
RETREG2-201ENST00000273048 MAP3K14Q99558 947 aa27.37■■□□□ 1.97
RETREG2-201ENST00000273048 ARGLU1Q9NWB6 273 aaPredicted RBP27.37■■□□□ 1.97
RETREG2-201ENST00000273048 GLI3P10071 1580 aa27.37■■□□□ 1.97
RETREG2-201ENST00000273048 UBE2Q2LH0YL09 131 aa27.37■■□□□ 1.97
RETREG2-201ENST00000273048 CPDO75976 1380 aa27.37■■□□□ 1.97
RETREG2-201ENST00000273048 TMEM94Q12767 1356 aa27.37■■□□□ 1.97
RETREG2-201ENST00000273048 ZMYM6O95789 1325 aa27.37■■□□□ 1.97
RETREG2-201ENST00000273048 PPP6R2O75170 966 aa27.36■■□□□ 1.97
RETREG2-201ENST00000273048 ATF3P18847 181 aa27.36■■□□□ 1.97
RETREG2-201ENST00000273048 BMP6P22004 513 aa27.36■■□□□ 1.97
RETREG2-201ENST00000273048 SPECC1Q5M775 1068 aa27.36■■□□□ 1.97
RETREG2-201ENST00000273048 RESP18Q5W5W9 173 aa27.36■■□□□ 1.97
RETREG2-201ENST00000273048 OLFM4Q6UX06 510 aa27.36■■□□□ 1.97
RETREG2-201ENST00000273048 PPP2R2CQ9Y2T4 447 aa27.36■■□□□ 1.97
RETREG2-201ENST00000273048 PCDHA5Q9Y5H7 936 aa27.36■■□□□ 1.97
RETREG2-201ENST00000273048 TBC1D10CQ8IV04 446 aa27.36■■□□□ 1.97
RETREG2-201ENST00000273048 CCDC191Q8NCU4 936 aa27.36■■□□□ 1.97
RETREG2-201ENST00000273048 POLR3GO15318 223 aaPredicted RBP27.35■■□□□ 1.97
RETREG2-201ENST00000273048 CCDC57Q2TAC2 916 aa27.35■■□□□ 1.97
RETREG2-201ENST00000273048 MICU3Q86XE3 530 aa27.35■■□□□ 1.97
RETREG2-201ENST00000273048 ANGEL1Q9UNK9 670 aaKnown RBP27.35■■□□□ 1.97
RETREG2-201ENST00000273048 CYP2C19P33261 490 aa27.35■■□□□ 1.97
RETREG2-201ENST00000273048 JMYQ8N9B5 988 aa27.35■■□□□ 1.97
RETREG2-201ENST00000273048 CNNM3Q8NE01 707 aa27.35■■□□□ 1.97
RETREG2-201ENST00000273048 WDR24Q96S15 920 aa27.35■■□□□ 1.97
RETREG2-201ENST00000273048 PDILTQ8N807 584 aa27.34■■□□□ 1.97
RETREG2-201ENST00000273048 MST1RQ04912 1400 aa27.34■■□□□ 1.97
RETREG2-201ENST00000273048 DDX60Q8IY21 1712 aaKnown RBP27.34■■□□□ 1.97
RETREG2-201ENST00000273048 EFCAB8A8MWE9 144 aa27.34■■□□□ 1.97
RETREG2-201ENST00000273048 KRBA2Q6ZNG9 492 aa27.34■■□□□ 1.97
RETREG2-201ENST00000273048 SRRTQ9BXP5 876 aaKnown RBP27.34■■□□□ 1.97
RETREG2-201ENST00000273048 ATG3Q9NT62 314 aa27.34■■□□□ 1.97
RETREG2-201ENST00000273048 ZSCAN12O43309 604 aa27.33■■□□□ 1.97
RETREG2-201ENST00000273048 TRDNQ13061 729 aa27.33■■□□□ 1.97
RETREG2-201ENST00000273048 MYL10Q9BUA6 226 aa27.33■■□□□ 1.97
RETREG2-201ENST00000273048 KCNH3Q9ULD8 1083 aa27.33■■□□□ 1.97
RETREG2-201ENST00000273048 ARHGAP6O43182 974 aa27.33■■□□□ 1.97
RETREG2-201ENST00000273048 GNG11P61952 73 aa27.32■■□□□ 1.96
RETREG2-201ENST00000273048 CCDC102BQ68D86 513 aa27.32■■□□□ 1.96
RETREG2-201ENST00000273048 ADKP55263 362 aaKnown RBP27.32■■□□□ 1.96
RETREG2-201ENST00000273048 APOA5Q6Q788 366 aa27.32■■□□□ 1.96
RETREG2-201ENST00000273048 TOGARAM2Q6ZUX3 1019 aa27.32■■□□□ 1.96
RETREG2-201ENST00000273048 BAG1Q99933 345 aaPredicted RBP27.32■■□□□ 1.96
RETREG2-201ENST00000273048 LAMB4A4D0S4 1761 aa27.32■■□□□ 1.96
RETREG2-201ENST00000273048 FAM237AA0A1B0GTK4 181 aa27.31■■□□□ 1.96
RETREG2-201ENST00000273048 SH2B2O14492 632 aaPredicted RBP27.31■■□□□ 1.96
RETREG2-201ENST00000273048 AKAP2Q9Y2D5 859 aa27.31■■□□□ 1.96
RETREG2-201ENST00000273048 NUP188Q5SRE5 1749 aa27.31■■□□□ 1.96
RETREG2-201ENST00000273048 B4E1Z4 1266 aa27.31■■□□□ 1.96
RETREG2-201ENST00000273048 RANBP6O60518 1105 aaKnown RBP27.31■■□□□ 1.96
RETREG2-201ENST00000273048 SASH3O75995 380 aa27.31■■□□□ 1.96
RETREG2-201ENST00000273048 FCHSD1Q86WN1 690 aa27.31■■□□□ 1.96
RETREG2-201ENST00000273048 WDR19Q8NEZ3 1342 aa27.31■■□□□ 1.96
RETREG2-201ENST00000273048 APPP05067 770 aa27.3■■□□□ 1.96
RETREG2-201ENST00000273048 INCENPQ9NQS7 918 aa27.3■■□□□ 1.96
RETREG2-201ENST00000273048 CASQ1P31415 396 aa27.3■■□□□ 1.96
RETREG2-201ENST00000273048 FAM193AP78312 1265 aa27.3■■□□□ 1.96
RETREG2-201ENST00000273048 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.3■■□□□ 1.96
RETREG2-201ENST00000273048 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.3■■□□□ 1.96
RETREG2-201ENST00000273048 COL18A1P39060 1754 aa27.29■■□□□ 1.96
RETREG2-201ENST00000273048 CUTAO60888 179 aa27.29■■□□□ 1.96
RETREG2-201ENST00000273048 TBX2Q13207 712 aaPredicted RBP27.29■■□□□ 1.96
RETREG2-201ENST00000273048 ZNF330Q9Y3S2 320 aaPredicted RBP27.29■■□□□ 1.96
RETREG2-201ENST00000273048 CDKL5O76039 1030 aa27.29■■□□□ 1.96
RETREG2-201ENST00000273048 MCAMP43121 646 aa27.29■■□□□ 1.96
RETREG2-201ENST00000273048 FMR1Q06787 632 aaKnown RBP eCLIP27.29■■□□□ 1.96
RETREG2-201ENST00000273048 ZNF827Q17R98 1081 aa27.29■■□□□ 1.96
RETREG2-201ENST00000273048 TEX35Q5T0J7 233 aa27.29■■□□□ 1.96
RETREG2-201ENST00000273048 TRMT44Q8IYL2 757 aaKnown RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms