RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 TRAF1Q13077 416 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 ATP8A2Q9NTI2 1148 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 SLC27A2O14975 620 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 CALM1P0DP23 149 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 CALM2P0DP24 149 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 CALM3P0DP25 149 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 BICD2Q8TD16 824 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 KAZALD1Q96I82 304 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 SEC62Q99442 399 aaKnown RBP9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 ZNF408Q9H9D4 720 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 PIH1D3Q9NQM4 214 aaKnown RBP9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 CD2APQ9Y5K6 639 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 TM4SF1P30408 202 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 Q6ZUG5 572 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 IFNL3Q8IZI9 196 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 LARP6Q9BRS8 491 aaKnown RBP9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 BCL2L12Q9HB09 334 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 TCP10L2B9ZVM9 353 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 PLCB2Q00722 1185 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 DCAF15Q66K64 600 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 PI4K2BQ8TCG2 481 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 VAT1LQ9HCJ6 419 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 ZNRF3Q9ULT6 936 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 RTL9Q8NET4 1388 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 CASP7P55210 303 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 RTN1Q16799 776 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 CCDC144CPQ8IYA2 1237 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 CCDC43Q96MW1 224 aaKnown RBP9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 B4E1Z4 1266 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 MECOMQ03112 1051 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 USP48Q86UV5 1035 aa9.65□□□□□ -0.86
GTF3C3-201ENST00000263956 PRDM1O75626 825 aa9.65□□□□□ -0.87
GTF3C3-201ENST00000263956 RAB3GAP1Q15042 981 aa9.65□□□□□ -0.87
GTF3C3-201ENST00000263956 CCDC12Q8WUD4 166 aaPredicted RBP9.65□□□□□ -0.87
GTF3C3-201ENST00000263956 SDR42E1Q8WUS8 393 aa9.65□□□□□ -0.87
GTF3C3-201ENST00000263956 C8orf76Q96K31 380 aa9.65□□□□□ -0.87
GTF3C3-201ENST00000263956 TMEM87BQ96K49 555 aa9.65□□□□□ -0.87
GTF3C3-201ENST00000263956 CLRN2A0PK11 232 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 HSPD1P10809 573 aaKnown RBP9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 PPARAQ07869 468 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 DIXDC1Q155Q3 683 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 AKNAD1Q5T1N1 836 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 WDR78Q5VTH9 848 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 RAB11FIP4Q86YS3 637 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 UPF1Q92900 1129 aaKnown RBP eCLIP9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 CUL5Q93034 780 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 ARHGEF10LQ9HCE6 1279 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 DDX49Q9Y6V7 483 aaKnown RBP9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 ABCC12Q96J65 1359 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 STK38Q15208 465 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 CCDC73Q6ZRK6 1079 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 CHST3Q7LGC8 479 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 ORC3Q9UBD5 711 aaPredicted RBP9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 IGSF3O75054 1194 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 CYP2E1P05181 493 aaPredicted RBP9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 ARID4AP29374 1257 aaPredicted RBP9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 CTDSPL2Q05D32 466 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 RUFY3Q7L099 469 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 CCDC47Q96A33 483 aaKnown RBP9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 CIZ1Q9ULV3 898 aaPredicted RBP9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 SUGT1Q9Y2Z0 365 aa9.64□□□□□ -0.87
GTF3C3-201ENST00000263956 HOXA10P31260 410 aaPredicted RBP9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 SKOR2Q2VWA4 1001 aaPredicted RBP9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 PRDX5P30044 214 aa9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 ZNF76P36508 570 aa9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 NLRP5P59047 1200 aa9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 DYNLL1P63167 89 aaKnown RBP9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 PRKG1Q13976 671 aa9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 CFAP100Q494V2 611 aa9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 SLC26A6Q9BXS9 759 aa9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 HOOK1Q9UJC3 728 aaKnown RBP9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 PPP1R12BO60237 982 aaPredicted RBP9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 FGAP02671 866 aa9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 GRM1Q13255 1194 aa9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 STRIP1Q5VSL9 837 aa9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 RBM27Q9P2N5 1060 aaKnown RBP9.63□□□□□ -0.87
GTF3C3-201ENST00000263956 SEC24BO95487 1268 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 CRKP46108 304 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 TFAP4Q01664 338 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 FBXO33Q7Z6M2 555 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 HOMER1Q86YM7 354 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 OSBP2Q969R2 916 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 ZKSCAN3Q9BRR0 538 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 SNX14Q9Y5W7 946 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 HSPA4P34932 840 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 SUPT20HL1Q3ZLR7 823 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 C3orf67Q6ZVT6 689 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 CSADQ9Y600 493 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 CDK11BP21127 795 aaKnown RBP9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 RPS6KB1P23443 525 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 LRP10Q7Z4F1 713 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 PROM2Q8N271 834 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 TBC1D2Q9BYX2 928 aa9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 GZF1Q9H116 711 aaPredicted RBP9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 DHX36Q9H2U1 1008 aaKnown RBP9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 PCP11498 1178 aaKnown RBP9.62□□□□□ -0.87
GTF3C3-201ENST00000263956 TXLNAP40222 546 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms