RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 NUP58Q9BVL2 599 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 PPIP5K1Q6PFW1 1433 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 SHANK2Q9UPX8 1470 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 IQCGQ9H095 443 aaKnown RBP12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 STX8Q9UNK0 236 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 CTNND2Q9UQB3 1225 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 MRVI1Q9Y6F6 885 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 FANCAO15360 1455 aa12.17□□□□□ -0.46
CSNK1A1-201ENST00000261798 DTNBO60941 627 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 RXRAP19793 462 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 FAM71BQ8TC56 605 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 CUL5Q93034 780 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 CRNKL1Q9BZJ0 848 aaKnown RBP12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 TRIM7Q9C029 511 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 CABP5Q9NP86 173 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 WWC3Q9ULE0 1092 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 FLT4P35916 1363 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 GNAT2P19087 354 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 ATP11AP98196 1134 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 OTUD7BQ6GQQ9 843 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 SPATS2Q86XZ4 545 aaKnown RBP12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 SYCP3Q8IZU3 236 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 ERMNQ8TAM6 284 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 SMC6Q96SB8 1091 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 SBNO2Q9Y2G9 1366 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 TRAPPC8Q9Y2L5 1435 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 ATP2A1O14983 1001 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 BUB1BO60566 1050 aaPredicted RBP12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 CALCOCO2Q13137 446 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 LMNTD2Q8IXW0 634 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 PPP1R14CQ8TAE6 165 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 TMEM87BQ96K49 555 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 BICC1Q9H694 974 aaKnown RBP12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 VWA3AA6NCI4 1184 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 LDHCP07864 332 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 MXRA7P84157 204 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 POSTNQ15063 836 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 SLF1Q9BQI6 1058 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 NOC4LQ9BVI4 516 aaKnown RBP12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 BABAM1Q9NWV8 329 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 SAR1BQ9Y6B6 198 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 NPATQ14207 1427 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 ALDH3A1P30838 453 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 ACTN2P35609 894 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 CACTINQ8WUQ7 758 aaKnown RBP12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 NRBP1Q9UHY1 535 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 UNC13AQ9UPW8 1703 aa12.16□□□□□ -0.46
CSNK1A1-201ENST00000261798 CYP7A1P22680 504 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 FCHSD1Q86WN1 690 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 PPFIA4O75335 1185 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 MCM7P33993 719 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 INTS8Q75QN2 995 aaKnown RBP12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 CROCCP2Q86T23 111 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 PNMA8AQ86V59 439 aaPredicted RBP12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 CDC5LQ99459 802 aaKnown RBP12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 KCNK9Q9NPC2 374 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 ANGEL1Q9UNK9 670 aaKnown RBP12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 PAK1Q13153 545 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 KRT79Q5XKE5 535 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 NOX5Q96PH1 765 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 RRP15Q9Y3B9 282 aaKnown RBP12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 CAPN7Q9Y6W3 813 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 MAP3K5Q99683 1374 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 IL13P35225 146 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 ADKP55263 362 aaKnown RBP12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 MYSM1Q5VVJ2 828 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 DIS3L2Q8IYB7 885 aaKnown RBP12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 PAF1Q8N7H5 531 aa12.15□□□□□ -0.46
CSNK1A1-201ENST00000261798 FAM135BQ49AJ0 1406 aa12.15□□□□□ -0.47
CSNK1A1-201ENST00000261798 BAG3O95817 575 aa12.15□□□□□ -0.47
CSNK1A1-201ENST00000261798 PCK1P35558 622 aa12.15□□□□□ -0.47
CSNK1A1-201ENST00000261798 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.47
CSNK1A1-201ENST00000261798 HEATR3Q7Z4Q2 680 aa12.15□□□□□ -0.47
CSNK1A1-201ENST00000261798 CRACR2BQ8N4Y2 399 aaPredicted RBP12.15□□□□□ -0.47
CSNK1A1-201ENST00000261798 BCAS4Q8TDM0 211 aa12.15□□□□□ -0.47
CSNK1A1-201ENST00000261798 USP28Q96RU2 1077 aa12.15□□□□□ -0.47
CSNK1A1-201ENST00000261798 NKIRAS1Q9NYS0 192 aa12.15□□□□□ -0.47
CSNK1A1-201ENST00000261798 ZNF608Q9ULD9 1512 aaPredicted RBP12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 USP19O94966 1318 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 DEXIO95424 95 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 FMNL3Q8IVF7 1028 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 NAP1L3Q99457 506 aaPredicted RBP12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 RAPGEF6Q8TEU7 1601 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 BICDL1Q6ZP65 573 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 SPTLC3Q9NUV7 552 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 ATP5DP30049 168 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 GNGT1P63211 74 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 MTUS1Q9ULD2 1270 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 HOXB7P09629 217 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 TERF2Q15554 542 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 SLF2Q8IX21 1173 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 TSKSQ9UJT2 592 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 ABCC2Q92887 1545 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 CCDC160A6NGH7 325 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 ACTN4O43707 911 aaKnown RBP12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 STX10O60499 249 aa12.14□□□□□ -0.47
CSNK1A1-201ENST00000261798 CEP85LQ5SZL2 805 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms