RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 APOA5Q6Q788 366 aa18.98■□□□□ 0.63
TM9SF1-201ENST00000261789 STK11IPQ8N1F8 1099 aa18.98■□□□□ 0.63
TM9SF1-201ENST00000261789 TBC1D2BQ9UPU7 963 aa18.98■□□□□ 0.63
TM9SF1-201ENST00000261789 ZMYM6O95789 1325 aa18.98■□□□□ 0.63
TM9SF1-201ENST00000261789 SH2B2O14492 632 aaPredicted RBP18.97■□□□□ 0.63
TM9SF1-201ENST00000261789 PDE8BO95263 885 aa18.97■□□□□ 0.63
TM9SF1-201ENST00000261789 PDE6AP16499 860 aa18.97■□□□□ 0.63
TM9SF1-201ENST00000261789 KRT40Q6A162 431 aa18.97■□□□□ 0.63
TM9SF1-201ENST00000261789 CLIC6Q96NY7 704 aa18.97■□□□□ 0.63
TM9SF1-201ENST00000261789 ZBTB1Q9Y2K1 713 aa18.97■□□□□ 0.63
TM9SF1-201ENST00000261789 PAXBP1Q9Y5B6 917 aa18.97■□□□□ 0.63
TM9SF1-201ENST00000261789 LMOD1P29536 600 aaPredicted RBP18.97■□□□□ 0.63
TM9SF1-201ENST00000261789 PTPN14Q15678 1187 aa18.97■□□□□ 0.63
TM9SF1-201ENST00000261789 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.97■□□□□ 0.63
TM9SF1-201ENST00000261789 V9GYY5 206 aaPredicted RBP18.97■□□□□ 0.63
TM9SF1-201ENST00000261789 CMA1P23946 247 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 CTDSPL2Q05D32 466 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 SLC39A14Q15043 492 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 NFXL1Q6ZNB6 911 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 TMC6Q7Z403 805 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 C4AP0C0L4 1744 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 C4BP0C0L5 1744 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 NEMFO60524 1076 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 ATP1A3P13637 1013 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 GNL2Q13823 731 aaKnown RBP18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 NCAPHQ15003 741 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 SHC4Q6S5L8 630 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 NYAP1Q6ZVC0 841 aa18.96■□□□□ 0.63
TM9SF1-201ENST00000261789 NHSL1Q5SYE7 1610 aa18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 RANBP6O60518 1105 aaKnown RBP18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 NLRP12P59046 1061 aa18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 PTPN21Q16825 1174 aa18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 CCAR2Q8N163 923 aaKnown RBP18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 TACC3Q9Y6A5 838 aa18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 SYKP43405 635 aa18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 ARMCX5Q6P1M9 558 aa18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 IGDCC4Q8TDY8 1250 aa18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 AIDAQ96BJ3 306 aa18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 TEX13AQ9BXU3 409 aaPredicted RBP18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 DDX60Q8IY21 1712 aaKnown RBP18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 CDHR2Q9BYE9 1310 aa18.95■□□□□ 0.62
TM9SF1-201ENST00000261789 TCRBV5S4A2TA0A5A2 114 aa18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 PNOCQ13519 176 aa18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 SPECC1Q5M775 1068 aa18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 STRBPQ96SI9 672 aaKnown RBP18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 FAM217BQ9NTX9 383 aaPredicted RBP18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 ABCC12Q96J65 1359 aa18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 ZBTB43O43298 467 aa18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 CYP19A1P11511 503 aaPredicted RBP18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 TTF1Q15361 905 aaPredicted RBP18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 UBE3CQ15386 1083 aa18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 CCDC82Q8N4S0 544 aa18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 LY9Q9HBG7 655 aa18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 EPB41L4AQ9HCS5 686 aaPredicted RBP18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 ZSWIM5Q9P217 1185 aa18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 WDR19Q8NEZ3 1342 aa18.94■□□□□ 0.62
TM9SF1-201ENST00000261789 PTPAQ15257 358 aa18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 NTRK3Q16288 839 aa18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 TMEM67Q5HYA8 995 aa18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 SMAP1Q8IYB5 467 aaPredicted RBP18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 MAGEB6Q8N7X4 407 aa18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 ZKSCAN3Q9BRR0 538 aa18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 UBN2Q6ZU65 1347 aa18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 ABCA3Q99758 1704 aa18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 IARSP41252 1262 aaKnown RBP18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 BPIFA3Q9BQP9 254 aa18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 OSBPL5Q9H0X9 879 aaPredicted RBP18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 HSD3B7Q9H2F3 369 aa18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 ARMT1Q9H993 441 aa18.93■□□□□ 0.62
TM9SF1-201ENST00000261789 GOLGA8AA7E2F4 631 aa18.92■□□□□ 0.62
TM9SF1-201ENST00000261789 PRKAB2O43741 272 aa18.92■□□□□ 0.62
TM9SF1-201ENST00000261789 GUCY1A2P33402 732 aa18.92■□□□□ 0.62
TM9SF1-201ENST00000261789 E4F1Q66K89 784 aaPredicted RBP18.92■□□□□ 0.62
TM9SF1-201ENST00000261789 CMTR1Q8N1G2 835 aaKnown RBP18.92■□□□□ 0.62
TM9SF1-201ENST00000261789 MAP3K14Q99558 947 aa18.92■□□□□ 0.62
TM9SF1-201ENST00000261789 SLC26A6Q9BXS9 759 aa18.92■□□□□ 0.62
TM9SF1-201ENST00000261789 ZNF215Q9UL58 517 aaPredicted RBP18.92■□□□□ 0.62
TM9SF1-201ENST00000261789 MBD4O95243 580 aa18.92■□□□□ 0.62
TM9SF1-201ENST00000261789 RRP12Q5JTH9 1297 aaKnown RBP18.92■□□□□ 0.62
TM9SF1-201ENST00000261789 BTG4Q9NY30 223 aa18.92■□□□□ 0.62
TM9SF1-201ENST00000261789 PDE8AO60658 829 aa18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 ARID4AP29374 1257 aaPredicted RBP18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 GSDMDP57764 484 aa18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 RASGRF1Q13972 1273 aa18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 IFNL3Q8IZI9 196 aa18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 DPF2Q92785 391 aa18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 ZNF512BQ96KM6 892 aaPredicted RBP18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 IFIT3O14879 490 aaKnown RBP18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 CDKL5O76039 1030 aa18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 ZSCAN20P17040 1043 aaPredicted RBP18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 LONRF3Q496Y0 759 aa18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 SPATA5Q8NB90 893 aa18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 NAPBQ9H115 298 aa18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 TOMM22Q9NS69 142 aa18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 HPSEQ9Y251 543 aa18.91■□□□□ 0.62
TM9SF1-201ENST00000261789 FOXN1O15353 648 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 FANCCQ00597 558 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 HSP90AA4PQ58FG1 418 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 DZIP3Q86Y13 1208 aaKnown RBP18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 FOXP4Q8IVH2 680 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms