RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 MPNDQ8N594 471 aa25.53■■□□□ 1.68
RNF39-201ENST00000244360 ARMT1Q9H993 441 aa25.53■■□□□ 1.68
RNF39-201ENST00000244360 METAP2P50579 478 aaKnown RBP eCLIP25.52■■□□□ 1.68
RNF39-201ENST00000244360 FAM160A1Q05DH4 1040 aa25.52■■□□□ 1.68
RNF39-201ENST00000244360 CCDC73Q6ZRK6 1079 aa25.52■■□□□ 1.68
RNF39-201ENST00000244360 LY9Q9HBG7 655 aa25.52■■□□□ 1.68
RNF39-201ENST00000244360 POLR3EQ9NVU0 708 aa25.52■■□□□ 1.68
RNF39-201ENST00000244360 SCN7AQ01118 1682 aa25.52■■□□□ 1.68
RNF39-201ENST00000244360 CNTNAP4Q9C0A0 1308 aa25.52■■□□□ 1.68
RNF39-201ENST00000244360 CDKL5O76039 1030 aa25.52■■□□□ 1.68
RNF39-201ENST00000244360 A0A1W2PQ27 194 aa25.51■■□□□ 1.67
RNF39-201ENST00000244360 A0A1W2PQ64 194 aa25.51■■□□□ 1.67
RNF39-201ENST00000244360 A0A1W2PQD8 194 aa25.51■■□□□ 1.67
RNF39-201ENST00000244360 YEATS4O95619 227 aa25.51■■□□□ 1.67
RNF39-201ENST00000244360 LIFRP42702 1097 aa25.51■■□□□ 1.67
RNF39-201ENST00000244360 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.51■■□□□ 1.67
RNF39-201ENST00000244360 LUZP1Q86V48 1076 aa25.51■■□□□ 1.67
RNF39-201ENST00000244360 LINC00301Q8NCQ3 95 aa25.51■■□□□ 1.67
RNF39-201ENST00000244360 TDRD7Q8NHU6 1098 aaKnown RBP25.51■■□□□ 1.67
RNF39-201ENST00000244360 CNNM2Q9H8M5 875 aa25.51■■□□□ 1.67
RNF39-201ENST00000244360 CHD4Q14839 1912 aa25.51■■□□□ 1.67
RNF39-201ENST00000244360 KIF23Q02241 960 aaPredicted RBP25.51■■□□□ 1.67
RNF39-201ENST00000244360 NID2Q14112 1375 aa25.51■■□□□ 1.67
RNF39-201ENST00000244360 ME1P48163 572 aa25.5■■□□□ 1.67
RNF39-201ENST00000244360 ERFEQ4G0M1 354 aa25.5■■□□□ 1.67
RNF39-201ENST00000244360 MYSM1Q5VVJ2 828 aa25.5■■□□□ 1.67
RNF39-201ENST00000244360 LCORLQ8N3X6 602 aa25.5■■□□□ 1.67
RNF39-201ENST00000244360 SENP2Q9HC62 589 aa25.5■■□□□ 1.67
RNF39-201ENST00000244360 PCDHA7Q9UN72 937 aa25.5■■□□□ 1.67
RNF39-201ENST00000244360 TACC3Q9Y6A5 838 aa25.5■■□□□ 1.67
RNF39-201ENST00000244360 AKNAD1Q5T1N1 836 aa25.49■■□□□ 1.67
RNF39-201ENST00000244360 ADALQ6DHV7 355 aa25.49■■□□□ 1.67
RNF39-201ENST00000244360 KCNF1Q9H3M0 494 aa25.49■■□□□ 1.67
RNF39-201ENST00000244360 C3orf67Q6ZVT6 689 aa25.49■■□□□ 1.67
RNF39-201ENST00000244360 FSIP1Q8NA03 581 aa25.49■■□□□ 1.67
RNF39-201ENST00000244360 KCNG4Q8TDN1 519 aa25.49■■□□□ 1.67
RNF39-201ENST00000244360 ZBTB43O43298 467 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 CDC27P30260 824 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 ANKRD18AQ8IVF6 992 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 STAG1Q8WVM7 1258 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 NACAP1Q9BZK3 213 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 KRT23Q9C075 422 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 BSDC1Q9NW68 430 aaPredicted RBP25.48■■□□□ 1.67
RNF39-201ENST00000244360 KIF28PB7ZC32 967 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 CTDSPL2Q05D32 466 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 UBE4AQ14139 1066 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 VPS72Q15906 364 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 NTRK3Q16288 839 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 FAM98CQ17RN3 349 aaKnown RBP25.48■■□□□ 1.67
RNF39-201ENST00000244360 TMEM67Q5HYA8 995 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 CPLX2Q6PUV4 134 aaKnown RBP25.48■■□□□ 1.67
RNF39-201ENST00000244360 MRPS27Q92552 414 aaKnown RBP25.48■■□□□ 1.67
RNF39-201ENST00000244360 ZSWIM5Q9P217 1185 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 CLIC4Q9Y696 253 aa25.48■■□□□ 1.67
RNF39-201ENST00000244360 CASZ1Q86V15 1759 aa25.47■■□□□ 1.67
RNF39-201ENST00000244360 PRKAB2O43741 272 aa25.47■■□□□ 1.67
RNF39-201ENST00000244360 KINO60870 393 aaKnown RBP25.47■■□□□ 1.67
RNF39-201ENST00000244360 CHAF1AQ13111 956 aaPredicted RBP25.47■■□□□ 1.67
RNF39-201ENST00000244360 SLC10A5Q5PT55 438 aa25.47■■□□□ 1.67
RNF39-201ENST00000244360 FMR1NBQ8N0W7 255 aaPredicted RBP25.47■■□□□ 1.67
RNF39-201ENST00000244360 GJB4Q9NTQ9 266 aa25.47■■□□□ 1.67
RNF39-201ENST00000244360 FAM217BQ9NTX9 383 aaPredicted RBP25.47■■□□□ 1.67
RNF39-201ENST00000244360 ZNF165P49910 485 aa25.47■■□□□ 1.67
RNF39-201ENST00000244360 SPC24Q8NBT2 197 aa25.47■■□□□ 1.67
RNF39-201ENST00000244360 MTA3Q9BTC8 594 aa25.47■■□□□ 1.67
RNF39-201ENST00000244360 DNAJC25Q9H1X3 360 aa25.47■■□□□ 1.67
RNF39-201ENST00000244360 INCENPQ9NQS7 918 aa25.47■■□□□ 1.67
RNF39-201ENST00000244360 SLC4A4Q9Y6R1 1079 aa25.47■■□□□ 1.67
RNF39-201ENST00000244360 COL1A1P02452 1464 aaPredicted RBP25.46■■□□□ 1.67
RNF39-201ENST00000244360 POLR3DP05423 398 aaPredicted RBP25.46■■□□□ 1.67
RNF39-201ENST00000244360 ALG1Q9BT22 464 aa25.46■■□□□ 1.67
RNF39-201ENST00000244360 LRP2BPQ9P2M1 347 aa25.46■■□□□ 1.67
RNF39-201ENST00000244360 STK38Q15208 465 aa25.45■■□□□ 1.67
RNF39-201ENST00000244360 MICU3Q86XE3 530 aa25.45■■□□□ 1.67
RNF39-201ENST00000244360 ECM29Q5VYK3 1845 aa25.45■■□□□ 1.67
RNF39-201ENST00000244360 STK36Q9NRP7 1315 aa25.45■■□□□ 1.67
RNF39-201ENST00000244360 TOM1O60784 492 aa25.45■■□□□ 1.66
RNF39-201ENST00000244360 STX1AQ16623 288 aa25.45■■□□□ 1.66
RNF39-201ENST00000244360 MFSD6Q6ZSS7 791 aa25.45■■□□□ 1.66
RNF39-201ENST00000244360 C17orf53Q8N3J3 647 aaPredicted RBP25.45■■□□□ 1.66
RNF39-201ENST00000244360 BCL2L12Q9HB09 334 aa25.45■■□□□ 1.66
RNF39-201ENST00000244360 PYCARDQ9ULZ3 195 aa25.45■■□□□ 1.66
RNF39-201ENST00000244360 GOLGA8AA7E2F4 631 aa25.44■■□□□ 1.66
RNF39-201ENST00000244360 TDO2P48775 406 aa25.44■■□□□ 1.66
RNF39-201ENST00000244360 NFXL1Q6ZNB6 911 aa25.44■■□□□ 1.66
RNF39-201ENST00000244360 PLA2G4DQ86XP0 818 aa25.44■■□□□ 1.66
RNF39-201ENST00000244360 GNL3LQ9NVN8 582 aaKnown RBP25.44■■□□□ 1.66
RNF39-201ENST00000244360 IFIT3O14879 490 aaKnown RBP25.44■■□□□ 1.66
RNF39-201ENST00000244360 SPTLC2O15270 562 aa25.44■■□□□ 1.66
RNF39-201ENST00000244360 RANBP6O60518 1105 aaKnown RBP25.44■■□□□ 1.66
RNF39-201ENST00000244360 RXRAP19793 462 aa25.44■■□□□ 1.66
RNF39-201ENST00000244360 RC3H1Q5TC82 1133 aaKnown RBP25.44■■□□□ 1.66
RNF39-201ENST00000244360 COL24A1Q17RW2 1714 aa25.43■■□□□ 1.66
RNF39-201ENST00000244360 ANO1Q5XXA6 986 aa25.43■■□□□ 1.66
RNF39-201ENST00000244360 AIFM3Q96NN9 605 aa25.43■■□□□ 1.66
RNF39-201ENST00000244360 CYP7A1P22680 504 aa25.43■■□□□ 1.66
RNF39-201ENST00000244360 ZNF75DP51815 510 aa25.43■■□□□ 1.66
RNF39-201ENST00000244360 PIP4K2BP78356 416 aa25.43■■□□□ 1.66
RNF39-201ENST00000244360 IQCB1Q15051 598 aa25.43■■□□□ 1.66
RNF39-201ENST00000244360 KRT40Q6A162 431 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms