RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 KRT23Q9C075 422 aa28.1■■■□□ 2.09
RRP9-201ENST00000232888 ATP8A2Q9NTI2 1148 aa28.1■■■□□ 2.09
RRP9-201ENST00000232888 BAG3O95817 575 aa28.09■■■□□ 2.09
RRP9-201ENST00000232888 PPP4CP60510 307 aa28.09■■■□□ 2.09
RRP9-201ENST00000232888 AKNAD1Q5T1N1 836 aa28.09■■■□□ 2.09
RRP9-201ENST00000232888 STAG1Q8WVM7 1258 aa28.09■■■□□ 2.09
RRP9-201ENST00000232888 C7orf43Q8WVR3 580 aa28.09■■■□□ 2.09
RRP9-201ENST00000232888 ZNF274Q96GC6 653 aaPredicted RBP28.09■■■□□ 2.09
RRP9-201ENST00000232888 TIAM2Q8IVF5 1701 aa28.09■■■□□ 2.09
RRP9-201ENST00000232888 PRC1O43663 620 aa28.08■■■□□ 2.09
RRP9-201ENST00000232888 DYNLL1P63167 89 aaKnown RBP28.08■■■□□ 2.09
RRP9-201ENST00000232888 FAM163AQ96GL9 167 aaPredicted RBP28.08■■■□□ 2.09
RRP9-201ENST00000232888 NOL10Q9BSC4 688 aaKnown RBP28.08■■■□□ 2.09
RRP9-201ENST00000232888 JAG2Q9Y219 1238 aa28.08■■■□□ 2.09
RRP9-201ENST00000232888 PCP11498 1178 aaKnown RBP28.07■■■□□ 2.08
RRP9-201ENST00000232888 SUPT20HQ8NEM7 779 aa28.07■■■□□ 2.08
RRP9-201ENST00000232888 MTA3Q9BTC8 594 aa28.07■■■□□ 2.08
RRP9-201ENST00000232888 RIMBP2O15034 1052 aa28.07■■■□□ 2.08
RRP9-201ENST00000232888 PFKFB2O60825 505 aa28.07■■■□□ 2.08
RRP9-201ENST00000232888 MCM4P33991 863 aa28.07■■■□□ 2.08
RRP9-201ENST00000232888 MFSD14BQ5SR56 506 aa28.07■■■□□ 2.08
RRP9-201ENST00000232888 MFSD6Q6ZSS7 791 aa28.07■■■□□ 2.08
RRP9-201ENST00000232888 PODNQ7Z5L7 613 aa28.07■■■□□ 2.08
RRP9-201ENST00000232888 GTF3C6Q969F1 213 aa28.07■■■□□ 2.08
RRP9-201ENST00000232888 AATFQ9NY61 560 aaKnown RBP eCLIP28.07■■■□□ 2.08
RRP9-201ENST00000232888 PPARAQ07869 468 aa28.06■■■□□ 2.08
RRP9-201ENST00000232888 ST3GAL1Q11201 340 aa28.06■■■□□ 2.08
RRP9-201ENST00000232888 OLFM4Q6UX06 510 aa28.06■■■□□ 2.08
RRP9-201ENST00000232888 SDR42E1Q8WUS8 393 aa28.06■■■□□ 2.08
RRP9-201ENST00000232888 TMEM87BQ96K49 555 aa28.06■■■□□ 2.08
RRP9-201ENST00000232888 MROH7-TTC4A0A0A0MT08 1334 aa28.05■■■□□ 2.08
RRP9-201ENST00000232888 G3V3G9 751 aa28.05■■■□□ 2.08
RRP9-201ENST00000232888 BRD1O95696 1058 aa28.05■■■□□ 2.08
RRP9-201ENST00000232888 DCAF8Q5TAQ9 597 aa28.05■■■□□ 2.08
RRP9-201ENST00000232888 NECAB1Q8N987 351 aa28.05■■■□□ 2.08
RRP9-201ENST00000232888 LLPHQ9BRT6 129 aaKnown RBP28.05■■■□□ 2.08
RRP9-201ENST00000232888 LRRC2Q9BYS8 371 aa28.05■■■□□ 2.08
RRP9-201ENST00000232888 WDR33Q9C0J8 1336 aaKnown RBP28.04■■■□□ 2.08
RRP9-201ENST00000232888 DDX11L8A8MPP1 907 aa28.04■■■□□ 2.08
RRP9-201ENST00000232888 PLCG2P16885 1265 aa28.04■■■□□ 2.08
RRP9-201ENST00000232888 PTMSP20962 102 aa28.04■■■□□ 2.08
RRP9-201ENST00000232888 SLX4Q8IY92 1834 aa28.04■■■□□ 2.08
RRP9-201ENST00000232888 NT5C2P49902 561 aa28.03■■■□□ 2.08
RRP9-201ENST00000232888 ANTXR2P58335 489 aa28.03■■■□□ 2.08
RRP9-201ENST00000232888 GTF2IP78347 998 aa28.03■■■□□ 2.08
RRP9-201ENST00000232888 SBK1Q52WX2 424 aa28.03■■■□□ 2.08
RRP9-201ENST00000232888 TTLL6Q8N841 843 aa28.03■■■□□ 2.08
RRP9-201ENST00000232888 DLEC1Q9Y238 1755 aa28.03■■■□□ 2.08
RRP9-201ENST00000232888 MTFR1LQ9H019 292 aa28.03■■■□□ 2.08
RRP9-201ENST00000232888 DCP1AQ9NPI6 582 aaPredicted RBP28.03■■■□□ 2.08
RRP9-201ENST00000232888 ZDHHC9Q9Y397 364 aa28.03■■■□□ 2.08
RRP9-201ENST00000232888 GPR75-ASB3A0A0A6YYF3 556 aa28.02■■■□□ 2.08
RRP9-201ENST00000232888 PDCP20941 246 aa28.02■■■□□ 2.08
RRP9-201ENST00000232888 POLD1P28340 1107 aa28.02■■■□□ 2.08
RRP9-201ENST00000232888 GJB2P29033 226 aa28.02■■■□□ 2.08
RRP9-201ENST00000232888 FKBP1AP62942 108 aaKnown RBP28.02■■■□□ 2.08
RRP9-201ENST00000232888 CTDSPL2Q05D32 466 aa28.02■■■□□ 2.08
RRP9-201ENST00000232888 APOBRQ0VD83 1088 aa28.02■■■□□ 2.08
RRP9-201ENST00000232888 ARPP21Q9UBL0 812 aaPredicted RBP28.02■■■□□ 2.08
RRP9-201ENST00000232888 NEDD4P46934 1319 aa28.01■■■□□ 2.07
RRP9-201ENST00000232888 PKP1Q13835 747 aa28.01■■■□□ 2.07
RRP9-201ENST00000232888 GRIK5Q16478 980 aa28.01■■■□□ 2.07
RRP9-201ENST00000232888 CHST3Q7LGC8 479 aa28.01■■■□□ 2.07
RRP9-201ENST00000232888 ANGEL1Q9UNK9 670 aaKnown RBP28.01■■■□□ 2.07
RRP9-201ENST00000232888 SNED1Q8TER0 1413 aa28.01■■■□□ 2.07
RRP9-201ENST00000232888 GAKO14976 1311 aa28■■■□□ 2.07
RRP9-201ENST00000232888 B4E1Z4 1266 aa28■■■□□ 2.07
RRP9-201ENST00000232888 SLC3A2P08195 630 aaKnown RBP28■■■□□ 2.07
RRP9-201ENST00000232888 FGRP09769 529 aa28■■■□□ 2.07
RRP9-201ENST00000232888 PDIA3P30101 505 aaKnown RBP28■■■□□ 2.07
RRP9-201ENST00000232888 TGFB2P61812 414 aa28■■■□□ 2.07
RRP9-201ENST00000232888 CTR9Q6PD62 1173 aa28■■■□□ 2.07
RRP9-201ENST00000232888 RTKN2Q8IZC4 609 aa28■■■□□ 2.07
RRP9-201ENST00000232888 MINDY4BA8MYZ0 360 aa27.99■■■□□ 2.07
RRP9-201ENST00000232888 STK3Q13188 491 aa27.99■■■□□ 2.07
RRP9-201ENST00000232888 KIF13BQ9NQT8 1826 aa27.99■■■□□ 2.07
RRP9-201ENST00000232888 GOLGA6L22H0YM25 854 aa27.99■■■□□ 2.07
RRP9-201ENST00000232888 SH2B2O14492 632 aaPredicted RBP27.99■■■□□ 2.07
RRP9-201ENST00000232888 LIFRP42702 1097 aa27.99■■■□□ 2.07
RRP9-201ENST00000232888 SART3Q15020 963 aaKnown RBP27.99■■■□□ 2.07
RRP9-201ENST00000232888 DIXDC1Q155Q3 683 aa27.99■■■□□ 2.07
RRP9-201ENST00000232888 DOK7Q18PE1 504 aa27.99■■■□□ 2.07
RRP9-201ENST00000232888 CYB5R4Q7L1T6 521 aa27.99■■■□□ 2.07
RRP9-201ENST00000232888 STX6O43752 255 aa27.98■■■□□ 2.07
RRP9-201ENST00000232888 DHX16O60231 1041 aaKnown RBP27.98■■■□□ 2.07
RRP9-201ENST00000232888 SCRN1Q12765 414 aa27.98■■■□□ 2.07
RRP9-201ENST00000232888 CCDC93Q567U6 631 aa27.98■■■□□ 2.07
RRP9-201ENST00000232888 ILDR1Q86SU0 546 aaPredicted RBP27.98■■■□□ 2.07
RRP9-201ENST00000232888 ESR2Q92731 530 aa27.98■■■□□ 2.07
RRP9-201ENST00000232888 USP17L12C9JPN9 530 aa27.97■■■□□ 2.07
RRP9-201ENST00000232888 USP17L21D6R901 530 aa27.97■■■□□ 2.07
RRP9-201ENST00000232888 BAG4O95429 457 aaKnown RBP27.97■■■□□ 2.07
RRP9-201ENST00000232888 SYT1P21579 422 aa27.97■■■□□ 2.07
RRP9-201ENST00000232888 HMGN5P82970 282 aaKnown RBP27.97■■■□□ 2.07
RRP9-201ENST00000232888 KIAA2012Q0VF49 1180 aa27.97■■■□□ 2.07
RRP9-201ENST00000232888 SOGA3Q5TF21 947 aa27.97■■■□□ 2.07
RRP9-201ENST00000232888 IGDCC4Q8TDY8 1250 aa27.97■■■□□ 2.07
RRP9-201ENST00000232888 ZSWIM5Q9P217 1185 aa27.97■■■□□ 2.07
RRP9-201ENST00000232888 MKRN1Q9UHC7 482 aaKnown RBP27.97■■■□□ 2.07
RRP9-201ENST00000232888 CHD4Q14839 1912 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms