RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 KRT23Q9C075 422 aa25.53■■□□□ 1.68
SMARCD2-201ENST00000225742 KAT6BQ8WYB5 2073 aa25.53■■□□□ 1.68
SMARCD2-201ENST00000225742 STK36Q9NRP7 1315 aa25.53■■□□□ 1.68
SMARCD2-201ENST00000225742 NID2Q14112 1375 aa25.53■■□□□ 1.68
SMARCD2-201ENST00000225742 ZBTB43O43298 467 aa25.53■■□□□ 1.68
SMARCD2-201ENST00000225742 POLR3DP05423 398 aaPredicted RBP25.53■■□□□ 1.68
SMARCD2-201ENST00000225742 PNPLA7Q6ZV29 1317 aa25.53■■□□□ 1.68
SMARCD2-201ENST00000225742 B4E1Z4 1266 aa25.52■■□□□ 1.68
SMARCD2-201ENST00000225742 CHAF1AQ13111 956 aaPredicted RBP25.52■■□□□ 1.68
SMARCD2-201ENST00000225742 SLC39A14Q15043 492 aa25.52■■□□□ 1.68
SMARCD2-201ENST00000225742 NAPBQ9H115 298 aa25.52■■□□□ 1.68
SMARCD2-201ENST00000225742 ROBO1Q9Y6N7 1651 aa25.52■■□□□ 1.68
SMARCD2-201ENST00000225742 IGHMBP2P38935 993 aaKnown RBP25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 NDUFA8P51970 172 aa25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 RASGRF1Q13972 1273 aa25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 DHX40Q8IX18 779 aaKnown RBP25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 MAGEB6Q8N7X4 407 aa25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 JMYQ8N9B5 988 aa25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 TIGD1Q96MW7 591 aa25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 LY9Q9HBG7 655 aa25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 KIAA1468Q9P260 1216 aa25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 KIF28PB7ZC32 967 aa25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 CAMTA2O94983 1202 aa25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 TMEM67Q5HYA8 995 aa25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 HELBQ8NG08 1087 aaPredicted RBP25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 NACAP1Q9BZK3 213 aa25.51■■□□□ 1.67
SMARCD2-201ENST00000225742 A0A1B0GVL5 298 aa25.5■■□□□ 1.67
SMARCD2-201ENST00000225742 PPP6R2O75170 966 aa25.5■■□□□ 1.67
SMARCD2-201ENST00000225742 MBD4O95243 580 aa25.5■■□□□ 1.67
SMARCD2-201ENST00000225742 CRKLP46109 303 aaKnown RBP25.5■■□□□ 1.67
SMARCD2-201ENST00000225742 RBM6P78332 1123 aaKnown RBP25.5■■□□□ 1.67
SMARCD2-201ENST00000225742 ZRSR1Q15695 479 aaKnown RBP25.5■■□□□ 1.67
SMARCD2-201ENST00000225742 AXDND1Q5T1B0 1012 aaPredicted RBP25.5■■□□□ 1.67
SMARCD2-201ENST00000225742 NFXL1Q6ZNB6 911 aa25.5■■□□□ 1.67
SMARCD2-201ENST00000225742 WASF1Q92558 559 aa25.5■■□□□ 1.67
SMARCD2-201ENST00000225742 NEDD4P46934 1319 aa25.5■■□□□ 1.67
SMARCD2-201ENST00000225742 GOLGA8AA7E2F4 631 aa25.49■■□□□ 1.67
SMARCD2-201ENST00000225742 IARSP41252 1262 aaKnown RBP25.49■■□□□ 1.67
SMARCD2-201ENST00000225742 TRIM29Q14134 588 aa25.49■■□□□ 1.67
SMARCD2-201ENST00000225742 KRT40Q6A162 431 aa25.49■■□□□ 1.67
SMARCD2-201ENST00000225742 RAB11FIP4Q86YS3 637 aa25.49■■□□□ 1.67
SMARCD2-201ENST00000225742 ATP6V1AP38606 617 aa25.49■■□□□ 1.67
SMARCD2-201ENST00000225742 NTRK3Q16288 839 aa25.49■■□□□ 1.67
SMARCD2-201ENST00000225742 DDB1Q16531 1140 aa25.49■■□□□ 1.67
SMARCD2-201ENST00000225742 AKNAD1Q5T1N1 836 aa25.49■■□□□ 1.67
SMARCD2-201ENST00000225742 EPB41L4AQ9HCS5 686 aaPredicted RBP25.49■■□□□ 1.67
SMARCD2-201ENST00000225742 SPATA31A1Q5TZJ5 1347 aa25.49■■□□□ 1.67
SMARCD2-201ENST00000225742 NRAPQ86VF7 1730 aa25.48■■□□□ 1.67
SMARCD2-201ENST00000225742 BCORQ6W2J9 1755 aa25.48■■□□□ 1.67
SMARCD2-201ENST00000225742 ECM29Q5VYK3 1845 aa25.48■■□□□ 1.67
SMARCD2-201ENST00000225742 RCAN1P53805 252 aa25.48■■□□□ 1.67
SMARCD2-201ENST00000225742 NRBP1Q9UHY1 535 aa25.48■■□□□ 1.67
SMARCD2-201ENST00000225742 FAM237AA0A1B0GTK4 181 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 GSG1L2A8MUP6 293 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 ZNF202O95125 648 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 U2AF2P26368 475 aaKnown RBP eCLIP25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 CDC27P30260 824 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 GLIPR1L2Q4G1C9 344 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 STAG1Q8WVM7 1258 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 CDC5LQ99459 802 aaKnown RBP25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 DENND2AQ9ULE3 1009 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 SLC12A7Q9Y666 1083 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 LOC102724428A0A0B4J2F2 783 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 CCDC69A6NI79 296 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 NTSR2O95665 410 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 SLC3A2P08195 630 aaKnown RBP25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 SIK1P57059 783 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 MFSD6Q6ZSS7 791 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 VPS37DQ86XT2 251 aa25.47■■□□□ 1.67
SMARCD2-201ENST00000225742 IFIT3O14879 490 aaKnown RBP25.46■■□□□ 1.67
SMARCD2-201ENST00000225742 NLRP12P59046 1061 aa25.46■■□□□ 1.67
SMARCD2-201ENST00000225742 SSRP1Q08945 709 aaKnown RBP25.46■■□□□ 1.67
SMARCD2-201ENST00000225742 DHX8Q14562 1220 aaKnown RBP25.46■■□□□ 1.67
SMARCD2-201ENST00000225742 SART3Q15020 963 aaKnown RBP25.46■■□□□ 1.67
SMARCD2-201ENST00000225742 TMTC2Q8N394 836 aa25.46■■□□□ 1.67
SMARCD2-201ENST00000225742 ARMT1Q9H993 441 aa25.46■■□□□ 1.67
SMARCD2-201ENST00000225742 SEC31BQ9NQW1 1179 aa25.46■■□□□ 1.67
SMARCD2-201ENST00000225742 FAM217BQ9NTX9 383 aaPredicted RBP25.46■■□□□ 1.67
SMARCD2-201ENST00000225742 FAM13BQ9NYF5 915 aa25.46■■□□□ 1.67
SMARCD2-201ENST00000225742 FMNL1O95466 1100 aaPredicted RBP25.45■■□□□ 1.66
SMARCD2-201ENST00000225742 GNL2Q13823 731 aaKnown RBP25.45■■□□□ 1.66
SMARCD2-201ENST00000225742 MICU3Q86XE3 530 aa25.45■■□□□ 1.66
SMARCD2-201ENST00000225742 RNF41Q9H4P4 317 aaPredicted RBP25.45■■□□□ 1.66
SMARCD2-201ENST00000225742 ZSWIM5Q9P217 1185 aa25.45■■□□□ 1.66
SMARCD2-201ENST00000225742 ZNF652Q9Y2D9 606 aa25.45■■□□□ 1.66
SMARCD2-201ENST00000225742 PFKFB1P16118 471 aa25.44■■□□□ 1.66
SMARCD2-201ENST00000225742 IFNAR1P17181 557 aa25.44■■□□□ 1.66
SMARCD2-201ENST00000225742 TPM4P67936 248 aa25.44■■□□□ 1.66
SMARCD2-201ENST00000225742 RBM10P98175 930 aaKnown RBP25.44■■□□□ 1.66
SMARCD2-201ENST00000225742 AOPEPQ8N6M6 819 aa25.44■■□□□ 1.66
SMARCD2-201ENST00000225742 NKX2-3Q8TAU0 364 aa25.44■■□□□ 1.66
SMARCD2-201ENST00000225742 SMARCC1Q92922 1105 aaPredicted RBP25.44■■□□□ 1.66
SMARCD2-201ENST00000225742 GJB4Q9NTQ9 266 aa25.44■■□□□ 1.66
SMARCD2-201ENST00000225742 SMTNL1A8MU46 457 aa25.44■■□□□ 1.66
SMARCD2-201ENST00000225742 CACTINQ8WUQ7 758 aaKnown RBP25.44■■□□□ 1.66
SMARCD2-201ENST00000225742 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.44■■□□□ 1.66
SMARCD2-201ENST00000225742 ZNF831Q5JPB2 1677 aa25.43■■□□□ 1.66
SMARCD2-201ENST00000225742 CTDSPL2Q05D32 466 aa25.43■■□□□ 1.66
SMARCD2-201ENST00000225742 LRMPQ12912 555 aa25.43■■□□□ 1.66
SMARCD2-201ENST00000225742 PTPAQ15257 358 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms